* using log directory 'd:/Rcompile/CRANpkg/local/3.3/bmrm.Rcheck' * using R version 3.3.3 (2017-03-06) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'bmrm/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'bmrm' version '3.7' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'bmrm' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'bmrm-Ex.R' failed The error most likely occurred in: > ### Name: mmc > ### Title: Convenient wrapper function to solve max-margin clustering > ### problem on a dataset > ### Aliases: mmc > > ### ** Examples > > # -- Prepare a 2D dataset to cluster with an intercept > x <- cbind(intercept=100,scale(data.matrix(iris[c(1,3)]),center=TRUE,scale=FALSE)) > > # -- Find max-margin clusters > y <- mmc(x,k=3,LAMBDA=0.001,minClusterSize=10,seeds=5) Error in fix.by(by.y, y) : 'by' must specify a uniquely valid column Calls: mmc ... merge.default -> merge -> merge.data.frame -> fix.by Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [2s] OK * checking PDF version of manual ... OK * DONE Status: 1 ERROR