Provides a framework to perform Non-negative Matrix Factorization (NMF). The package implements a set of already published algorithms and seeding methods, and provides a framework to test, develop and plug new/custom algorithms. Most of the built-in algorithms have been optimized in C++, and the main interface function provides an easy way of performing parallel computations on multicore machines.
Version: | 0.20.6 |
Depends: | R (≥ 3.0.0), methods, utils, pkgmaker (≥ 0.20), registry, rngtools (≥ 1.2.3), cluster |
Imports: | graphics, stats, stringr (≥ 1.0.0), digest, grid, grDevices, gridBase, colorspace, RColorBrewer, foreach, doParallel, ggplot2, reshape2 |
Suggests: | RcppOctave (≥ 0.11), fastICA, doMPI, bigmemory (≥ 4.2), synchronicity, corpcor, xtable, devtools, knitr, bibtex, RUnit, mail, Biobase |
Published: | 2015-05-26 |
Author: | Renaud Gaujoux, Cathal Seoighe |
Maintainer: | ORPHANED |
BugReports: | http://github.com/renozao/NMF/issues |
License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
URL: | http://renozao.github.io/NMF |
NeedsCompilation: | yes |
Citation: | NMF citation info |
Materials: | NEWS |
CRAN checks: | NMF results |
Reference manual: | NMF.pdf |
Vignettes: |
NMF-unitTests An introduction to the package NMF NMF: generating heatmaps |
Package source: | NMF_0.20.6.tar.gz |
Windows binaries: | r-devel: NMF_0.20.6.zip, r-release: NMF_0.20.6.zip, r-oldrel: NMF_0.20.6.zip |
OS X El Capitan binaries: | r-release: NMF_0.20.6.tgz |
OS X Mavericks binaries: | r-oldrel: NMF_0.20.6.tgz |
Old sources: | NMF archive |
Reverse depends: | InterSIM, IntNMF |
Reverse imports: | genBart, hNMF, phantom |
Reverse suggests: | igraph, PAC |
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