Imports real-time thermo cycler (qPCR) data from Real-time PCR Data Markup Language (RDML) and transforms to the appropriate formats of the 'qpcR' and 'chipPCR' packages. Contains a dendrogram visualization for the structure of RDML object and GUI for RDML editing.
Version: | 0.9-9 |
Depends: | R (≥ 3.2.0) |
Imports: | checkmate (≥ 1.6.2), data.table, pipeR, readxl, rlist (≥ 0.4), R6 (≥ 2.0.1), stringr, tools (≥ 3.2), xml2 (≥ 1.0), lubridate (≥ 1.6.0) |
Suggests: | chipPCR, magrittr, reshape2, qpcR, dplyr, ggplot2, knitr, kfigr, MBmca, shiny, shinyjs, shinythemes, V8, testthat |
Published: | 2017-09-25 |
Author: | Konstantin A. Blagodatskikh [cre, aut], Stefan Roediger [aut], Michal Burdukiewicz [aut], Andrej-Nikolai Spiess [aut] |
Maintainer: | Konstantin A. Blagodatskikh <k.blag at yandex.ru> |
License: | MIT + file LICENSE |
URL: | https://github.com/kablag/RDML |
NeedsCompilation: | no |
Citation: | RDML citation info |
Materials: | README ChangeLog |
CRAN checks: | RDML results |
Reference manual: | RDML.pdf |
Vignettes: |
Creating RDML file from raw data Using RDML package Using RDML with other R packages |
Package source: | RDML_0.9-9.tar.gz |
Windows binaries: | r-devel: RDML_0.9-9.zip, r-release: RDML_0.9-9.zip, r-oldrel: RDML_0.9-9.zip |
OS X El Capitan binaries: | r-release: RDML_0.9-9.tgz |
OS X Mavericks binaries: | r-oldrel: RDML_0.9-9.tgz |
Old sources: | RDML archive |
Reverse suggests: | chipPCR, PCRedux |
Please use the canonical form https://CRAN.R-project.org/package=RDML to link to this page.