Genetically modified organisms are used to test the phenotypic effects of mutation. Often, multiple substitutions impact organismal fitness differently than single substitutions (epistatic interactions). This package fits three basic models (additive, multiplicative, and stickbreaking) to fitness data and suggests the best fitting model by multinomial regression. Stickbreaker can also be used to simulate fitness data.
Version: | 1.0.0 |
Depends: | R (≥ 3.3.1) |
Imports: | nnet, lattice, xtable |
Suggests: | knitr, rmarkdown |
Published: | 2017-03-10 |
Author: | Craig Miller [aut], James Van Leuven [cre] |
Maintainer: | James Van Leuven <jtvanleuven at gmail.com> |
License: | GPL-3 |
NeedsCompilation: | no |
CRAN checks: | Stickbreaker results |
Reference manual: | Stickbreaker.pdf |
Vignettes: |
Stickbreaker Vignette |
Package source: | Stickbreaker_1.0.0.tar.gz |
Windows binaries: | r-devel: Stickbreaker_1.0.0.zip, r-release: Stickbreaker_1.0.0.zip, r-oldrel: Stickbreaker_1.0.0.zip |
OS X El Capitan binaries: | r-release: Stickbreaker_1.0.0.tgz |
OS X Mavericks binaries: | r-oldrel: Stickbreaker_1.0.0.tgz |
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