Available CRAN Packages By Date of Publication

Date	Package	Title
2018-02-24	Bolstad	Functions for Elementary Bayesian Inference
2018-02-24	coloc	Colocalisation Tests of Two Genetic Traits
2018-02-24	MVN	Multivariate Normality Tests
2018-02-24	pixiedust	Tables so Beautifully Fine-Tuned You Will Believe It's Magic
2018-02-23	antaresRead	Import, Manipulate and Explore the Results of an 'Antares' Simulation
2018-02-23	assertr	Assertive Programming for R Analysis Pipelines
2018-02-23	basefun	Infrastructure for Computing with Basis Functions
2018-02-23	bea.R	Bureau of Economic Analysis API
2018-02-23	brainGraph	Graph Theory Analysis of Brain MRI Data
2018-02-23	brglm2	Bias Reduction in Generalized Linear Models
2018-02-23	bsplinePsd	Bayesian Nonparametric Spectral Density Estimation Using B-Spline Priors
2018-02-23	causalweight	Causal Inference Based on Weighting Estimators
2018-02-23	clespr	Composite Likelihood Estimation for Spatial Data
2018-02-23	CPBayes	Bayesian Meta Analysis for Studying Cross-Phenotype Genetic Associations
2018-02-23	dnet	Integrative Analysis of Omics Data in Terms of Network, Evolution and Ontology
2018-02-23	dnr	Simulate Dynamic Networks using Exponential Random Graph Models (ERGM) Family
2018-02-23	dwapi	A Client for 'data.world' REST API
2018-02-23	dynamo	Fit a Stochastic Dynamical Array Model to Array Data
2018-02-23	huxtable	Easily Create and Style Tables for LaTeX, HTML and Other Formats
2018-02-23	intamapInteractive	Interactive Add-on Functionality for 'intamap'
2018-02-23	MASS	Support Functions and Datasets for Venables and Ripley's MASS
2018-02-23	matchingMarkets	Analysis of Stable Matchings
2018-02-23	mlt	Most Likely Transformations
2018-02-23	mmmgee	Simultaneous Inference for Multiple Linear Contrasts in GEE Models
2018-02-23	multfisher	Optimal Exact Tests for Multiple Binary Endpoints
2018-02-23	neat	Efficient Network Enrichment Analysis Test
2018-02-23	NlinTS	Non Linear Time Series Analysis
2018-02-23	PropCIs	Various Confidence Interval Methods for Proportions
2018-02-23	Rcmdr	R Commander
2018-02-23	RcmdrMisc	R Commander Miscellaneous Functions
2018-02-23	rpart	Recursive Partitioning and Regression Trees
2018-02-23	ruler	Tidy Data Validation Reports
2018-02-23	SCperf	Functions for Planning and Managing Inventories in a Supply Chain
2018-02-23	segclust2d	Bivariate Segmentation/Clustering Methods and Tools
2018-02-23	SPUTNIK	SPatially aUTomatic deNoising for Ims toolKit
2018-02-23	states	Create Panels of Independent States
2018-02-23	supernova	Judd & McClelland Formatting for ANOVA Output
2018-02-23	tkRplotR	Display Resizable Plots
2018-02-23	TreeBUGS	Hierarchical Multinomial Processing Tree Modeling
2018-02-23	variables	Variable Descriptions
2018-02-22	amelie	Anomaly Detection with Normal Probability Functions
2018-02-22	AMR	Antimicrobial Resistance Analysis
2018-02-22	anipaths	Animation of Observed Trajectories Using Spline-Based Interpolation
2018-02-22	BayesXsrc	R Package Distribution of the BayesX C++ Sources
2018-02-22	BEACH	Biometric Exploratory Analysis Creation House
2018-02-22	betapart	Partitioning Beta Diversity into Turnover and Nestedness Components
2018-02-22	braQCA	Bootstrapped Robustness Assessment for Qualitative Comparative Analysis
2018-02-22	colmozzie	Dengue Cases and Climate Variables in Colombo Sri Lanka
2018-02-22	DGM	Dynamic Graphical Models
2018-02-22	diceR	Diverse Cluster Ensemble in R
2018-02-22	dplyr.teradata	A 'Teradata' Backend for 'dplyr'
2018-02-22	gcerisk	Generalized Competing Event Model
2018-02-22	GD	Geographical Detectors
2018-02-22	glmm	Generalized Linear Mixed Models via Monte Carlo Likelihood Approximation
2018-02-22	grattan	Australian Tax Policy Analysis
2018-02-22	IBCF.MTME	Item Based Collaborative Filtering for Multi-Trait and Multi-Environment Data
2018-02-22	irtreliability	Item Response Theory Reliability
2018-02-22	lassopv	Nonparametric P-Value Estimation for Predictors in Lasso
2018-02-22	mev	Multivariate Extreme Value Distributions
2018-02-22	MFPCA	Multivariate Functional Principal Component Analysis for Data Observed on Different Dimensional Domains
2018-02-22	msgpack	A Compact, High Speed Data Format
2018-02-22	NormalizeMets	Analysis of Metabolomics Data
2018-02-22	osmdata	Import 'OpenStreetMap' Data as Simple Features or Spatial Objects
2018-02-22	profvis	Interactive Visualizations for Profiling R Code
2018-02-22	RCRnorm	An Integrated Regression Model for Normalizing 'NanoString nCounter' Data
2018-02-22	REIDS	Random Effects for the Identification of Differential Splicing
2018-02-22	rsimsum	Analysis of Simulation Studies Including Monte Carlo Error
2018-02-22	Rttf2pt1	'ttf2pt1' Program
2018-02-22	seplyr	Improved Standard Evaluation Interfaces for Common Data Manipulation Tasks
2018-02-22	sigQC	Quality Control Metrics for Gene Signatures
2018-02-22	smbinning	Scoring Modeling and Optimal Binning
2018-02-22	socialmixr	Social Mixing Matrices for Infectious Disease Modelling
2018-02-22	sparr	Spatial and Spatiotemporal Relative Risk
2018-02-22	stdReg	Regression Standardization
2018-02-22	suncalc	Compute Sun Position, Sunlight Phases, Moon Position and Lunar Phase
2018-02-22	switchr	Installing, Managing, and Switching Between Distinct Sets of Installed Packages
2018-02-22	SympluR	Analyze Healthcare Social Media Data from the 'Symplur' API
2018-02-22	treespace	Statistical Exploration of Landscapes of Phylogenetic Trees
2018-02-22	VTrack	A Collection of Tools for the Analysis of Remote Acoustic Telemetry Data
2018-02-22	wbsts	Multiple Change-Point Detection for Nonstationary Time Series
2018-02-21	bayeslm	Efficient Sampling for Gaussian Linear Regression with Arbitrary Priors
2018-02-21	BIOMASS	Estimating Aboveground Biomass and Its Uncertainty in Tropical Forests
2018-02-21	Blendstat	Joint Analysis of Experiments with Mixtures and Random Effects
2018-02-21	BOIN	Bayesian Optimal INterval (BOIN) Design for Single-Agent and Drug- Combination Phase I Clinical Trials
2018-02-21	BoSSA	A Bunch of Structure and Sequence Analysis
2018-02-21	chunkR	Read Tables in Chunks
2018-02-21	eDMA	Dynamic Model Averaging with Grid Search
2018-02-21	enveomics.R	Various Utilities for Microbial Genomics and Metagenomics
2018-02-21	factorMerger	The Merging Path Plot
2018-02-21	FlexGAM	Generalized Additive Models with Flexible Response Functions
2018-02-21	funData	An S4 Class for Functional Data
2018-02-21	isni	Index of Sensitivity to Nonignorability
2018-02-21	ivprobit	Instrumental Variables Probit Model
2018-02-21	matrixsampling	Simulations of Matrix Variate Distributions
2018-02-21	MLML2R	Maximum Likelihood Estimation of DNA Methylation and Hydroxymethylation Proportions
2018-02-21	ncpen	Nonconvex Penalized Estimation for Generalized Linear Models
2018-02-21	oasis	Multiple Sclerosis Lesion Segmentation using Magnetic Resonance Imaging (MRI)
2018-02-21	phenomap	Projecting Satellite-Derived Phenology in Space
2018-02-21	phyloTop	Calculating Topological Properties of Phylogenies
2018-02-21	RAdwords	Loading Google Adwords Data into R
2018-02-21	RcmdrPlugin.KMggplot2	R Commander Plug-in for Data Visualization with 'ggplot2'
2018-02-21	reactR	React Helpers
2018-02-21	rfUtilities	Random Forests Model Selection and Performance Evaluation
2018-02-21	rroad	Road Condition Analysis
2018-02-21	RSAGA	SAGA Geoprocessing and Terrain Analysis
2018-02-21	rusk	Beautiful Graphical Representation of Multiplication Tables on a Modular Circle
2018-02-21	sdm	Species Distribution Modelling
2018-02-21	sgmcmc	Stochastic Gradient Markov Chain Monte Carlo
2018-02-21	svMisc	SciViews - Miscellaneous Functions
2018-02-21	timeDate	Rmetrics - Chronological and Calendar Objects
2018-02-21	VeryLargeIntegers	Store and Operate with Arbitrarily Large Integers
2018-02-21	word.alignment	Computing Word Alignment Using IBM Model 1 (and Symmetrization) for a Given Parallel Corpus and Its Evaluation
2018-02-21	wrapr	Wrap R Tools for Debugging and Parametric Programming
2018-02-20	alfred	Downloading Time Series from ALFRED Database for Various Vintages
2018-02-20	BINCOR	Estimate the Correlation Between Two Irregular Climate Time Series
2018-02-20	CircMLE	Maximum Likelihood Analysis of Circular Data
2018-02-20	cobalt	Covariate Balance Tables and Plots
2018-02-20	CVXR	Disciplined Convex Optimization
2018-02-20	DClusterm	Model-Based Detection of Disease Clusters
2018-02-20	fingerPro	Sediment Source Fingerprinting
2018-02-20	fpp2	Data for "Forecasting: Principles and Practice" (2nd Edition)
2018-02-20	FunChisq	Chi-Square and Exact Tests for Model-Free Functional Dependency
2018-02-20	gdm	Generalized Dissimilarity Modeling
2018-02-20	geogrid	Turn Geospatial Polygons into Regular or Hexagonal Grids
2018-02-20	gvcR	Genotypic Variance Components
2018-02-20	highSCREEN	High-Throughput Screening for Plate Based Essays
2018-02-20	idx2r	Convert Files to and from IDX Format to Vectors, Matrices and Arrays
2018-02-20	InterVA4	Replicate and Analyse 'InterVA4'
2018-02-20	knitr	A General-Purpose Package for Dynamic Report Generation in R
2018-02-20	knitrProgressBar	Provides Progress Bars in 'knitr'
2018-02-20	LLM	Logit Leaf Model Classifier for Binary Classification
2018-02-20	loggit	Effortless Exception Logging
2018-02-20	measuRing	Detection and Control of Tree-Ring Widths on Scanned Image Sections
2018-02-20	meetupapi	Access 'Meetup' API
2018-02-20	metaplot	Data-Driven Diagnostic Plots
2018-02-20	mlxR	Simulation of Longitudinal Data
2018-02-20	naivereg	Nonparametric Additive Instrumental Variable Estimator: A Group Shrinkage Estimation Perspective
2018-02-20	rbacon	Age-Depth Modelling using Bayesian Statistics
2018-02-20	RcppCWB	'Rcpp' Bindings for the 'Corpus Workbench' ('CWB')
2018-02-20	reinsureR	Reinsurance Treaties Application
2018-02-20	rlang	Functions for Base Types and Core R and 'Tidyverse' Features
2018-02-20	rtip	Inequality, Welfare and Poverty Indices and Curves using the EU-SILC Data
2018-02-20	sNPLS	NPLS Regression with L1 Penalization
2018-02-20	SpatPCA	Regularized Principal Component Analysis for Spatial Data
2018-02-20	thinkr	Tools for Cleaning Up Messy Files
2018-02-20	TP.idm	Estimation of Transition Probabilities for the Illness-Death Model
2018-02-20	trackr	Semantic Annotation and Discoverability System for R-Based Artifacts
2018-02-20	tsibble	Tidy Temporal Data Frames and Tools
2018-02-20	VennDiagram	Generate High-Resolution Venn and Euler Plots
2018-02-19	archdata	Example Datasets from Archaeological Research
2018-02-19	archivist	Tools for Storing, Restoring and Searching for R Objects
2018-02-19	bmrm	Bundle Methods for Regularized Risk Minimization Package
2018-02-19	clinDR	Simulation and Analysis Tools for Clinical Dose Response Modeling
2018-02-19	colorhcplot	Colorful Hierarchical Clustering Dendrograms
2018-02-19	confSAM	Estimates and Bounds for the False Discovery Proportion, by Permutation
2018-02-19	dbplyr	A 'dplyr' Back End for Databases
2018-02-19	fmriqa	Functional MRI Quality Assurance Routines
2018-02-19	forcats	Tools for Working with Categorical Variables (Factors)
2018-02-19	forestControl	Approximate False Positive Rate Control in Selection Frequency for Random Forest
2018-02-19	funrar	Functional Rarity Indices Computation
2018-02-19	GGIR	Raw Accelerometer Data Analysis
2018-02-19	GpGp	Fast Gaussian Process Computation Using Vecchia's Approximation
2018-02-19	IROmiss	Imputation Regularized Optimization Algorithm
2018-02-19	MetaComp	EDGE Taxonomy Assignments Visualization
2018-02-19	mfGARCH	Mixed-Frequency GARCH Models
2018-02-19	MSCMT	Multivariate Synthetic Control Method Using Time Series
2018-02-19	PlackettLuce	Plackett-Luce Models for Rankings
2018-02-19	projpred	Projection Predictive Feature Selection
2018-02-19	qtl	Tools for Analyzing QTL Experiments
2018-02-19	rcompanion	Functions to Support Extension Education Program Evaluation
2018-02-19	rgdax	Wrapper for 'GDAX' Cryptocurrency Exchange
2018-02-19	riskyr	Rendering Risk Literacy more Transparent
2018-02-19	stringr	Simple, Consistent Wrappers for Common String Operations
2018-02-19	textmineR	Functions for Text Mining and Topic Modeling
2018-02-19	tidyquant	Tidy Quantitative Financial Analysis
2018-02-19	tidytext	Text Mining using 'dplyr', 'ggplot2', and Other Tidy Tools
2018-02-19	WMWssp	Wilcoxon-Mann-Whitney Sample Size Planning
2018-02-19	xaringan	Presentation Ninja
2018-02-19	XML	Tools for Parsing and Generating XML Within R and S-Plus
2018-02-18	agRee	Various Methods for Measuring Agreement
2018-02-18	binequality	Methods for Analyzing Binned Income Data
2018-02-18	biosignalEMG	Tools for Electromyogram Signals (EMG) Analysis
2018-02-18	bookdown	Authoring Books and Technical Documents with R Markdown
2018-02-18	codingMatrices	Alternative Factor Coding Matrices for Linear Model Formulae
2018-02-18	CovTools	Statistical Tools for Covariance Analysis
2018-02-18	detrendr	Detrend Images
2018-02-18	devtools	Tools to Make Developing R Packages Easier
2018-02-18	ECOSolveR	Embedded Conic Solver in R
2018-02-18	ecospace	Simulating Community Assembly and Ecological Diversification Using Ecospace Frameworks
2018-02-18	EpiILM	Spatial and Network Based Individual Level Models for Epidemics
2018-02-18	gambin	Fit the Gambin Model to Species Abundance Distributions
2018-02-18	githubinstall	A Helpful Way to Install R Packages Hosted on GitHub
2018-02-18	imbalance	Preprocessing Algorithms for Imbalanced Datasets
2018-02-18	kamila	Methods for Clustering Mixed-Type Data
2018-02-18	kernelboot	Smoothed Bootstrap and Random Generation from Kernel Densities
2018-02-18	likelihoodAsy	Functions for Likelihood Asymptotics
2018-02-18	metamisc	Diagnostic and Prognostic Meta-Analysis
2018-02-18	petro.One	Statistics and Text Mining for Oil and Gas Papers from OnePetro Metadata
2018-02-18	Phase123	Simulating and Conducting Phase 123 Trials
2018-02-18	PottsUtils	Utility Functions of the Potts Models
2018-02-18	pryr	Tools for Computing on the Language
2018-02-18	ratios	Calculating Ratios Between Two Data Sets and Correction for Adhering Particles on Plants
2018-02-18	RcppNumerical	'Rcpp' Integration for Numerical Computing Libraries
2018-02-18	RJafroc	Modeling, Analysis, Validation and Visualization of Observer Performance Studies in Diagnostic Radiology
2018-02-18	rstanarm	Bayesian Applied Regression Modeling via Stan
2018-02-18	SamplingStrata	Optimal Stratification of Sampling Frames for Multipurpose Sampling Surveys
2018-02-18	serrsBayes	Bayesian Modelling of Raman Spectroscopy
2018-02-18	sim1000G	Genotype Simulations for Rare or Common Variants Using Haplotypes from 1000 Genomes
2018-02-18	spacyr	Wrapper to the 'spaCy' 'NLP' Library
2018-02-18	tfruns	Training Run Tools for 'TensorFlow'
2018-02-18	tidyLPA	Easily Carry Out Latent Profile Analysis
2018-02-18	WRSS	Water Resources System Simulator
2018-02-17	Compind	Composite Indicators Functions
2018-02-17	gamlss.spatial	Spatial Terms in Generalized Additive Models for Location Scale and Shape Models
2018-02-16	adklakedata	Adirondack Long-Term Lake Data
2018-02-16	BayesNetBP	Bayesian Network Belief Propagation
2018-02-16	cnmlcd	Maximum Likelihood Estimation of a Log-Concave Density Function
2018-02-16	dataPreparation	Automated Data Preparation
2018-02-16	dub	Unpacking Assignment for Lists via Pattern Matching
2018-02-16	estudy2	An Implementation of Parametric and Nonparametric Event Study
2018-02-16	findR	Find Code Snippets, R Scripts, R Markdown, PDF and Text Files with Pattern Matching
2018-02-16	genBart	Generate 'BART' File
2018-02-16	GetDFPData	Reading Annual Financial Reports from Bovespa's DFP, FRE and FCA System
2018-02-16	getopt	C-Like 'getopt' Behavior
2018-02-16	ggmuller	Create Muller Plots of Evolutionary Dynamics
2018-02-16	googleAnalyticsR	Google Analytics API into R
2018-02-16	largeVis	High-Quality Visualizations of Large, High-Dimensional Datasets
2018-02-16	lfe	Linear Group Fixed Effects
2018-02-16	mdmb	Model Based Treatment of Missing Data
2018-02-16	meta4diag	Meta-Analysis for Diagnostic Test Studies
2018-02-16	miscF	Miscellaneous Functions
2018-02-16	MST	Multivariate Survival Trees
2018-02-16	nlme	Linear and Nonlinear Mixed Effects Models
2018-02-16	NLMR	Simulating Neutral Landscape Models
2018-02-16	NNS	Nonlinear Nonparametric Statistics
2018-02-16	PakPC2017	Pakistan Population Census 2017
2018-02-16	phenoCDM	Continuous Development Models for Incremental Time-Series Analysis
2018-02-16	PowerUpR	Power Analysis Tools for Multilevel Randomized Experiments
2018-02-16	PPCI	Projection Pursuit for Cluster Identification
2018-02-16	ppcSpatial	Spatial Analysis of Pakistan Population Census
2018-02-16	recurse	Computes Revisitation Metrics for Trajectory Data
2018-02-16	RSiteCatalyst	R Client for Adobe Analytics API V1.4
2018-02-16	spider	Species Identity and Evolution in R
2018-02-16	worldmet	Import Surface Meteorological Data from NOAA Integrated Surface Database (ISD)
2018-02-15	aster	Aster Models
2018-02-15	BioCircos	Interactive Circular Visualization of Genomic Data using 'htmlwidgets' and 'BioCircos.js'
2018-02-15	Brundle	Normalisation Tools for Inter-Condition Variability of ChIP-Seq Data
2018-02-15	btergm	Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood
2018-02-15	cgam	Constrained Generalized Additive Model
2018-02-15	clust.bin.pair	Statistical Methods for Analyzing Clustered Matched Pair Data
2018-02-15	cofeatureR	Generate Cofeature Matrices
2018-02-15	crmPack	Object-Oriented Implementation of CRM Designs
2018-02-15	Deriv	Symbolic Differentiation
2018-02-15	estimatr	Fast Estimators for Design-Based Inference
2018-02-15	glinternet	Learning Interactions via Hierarchical Group-Lasso Regularization
2018-02-15	gProfileR	Interface to the 'g:Profiler' Toolkit
2018-02-15	madness	Automatic Differentiation of Multivariate Operations
2018-02-15	micropan	Microbial Pan-Genome Analysis
2018-02-15	nmathresh	Thresholds and Invariant Intervals for Network Meta-Analysis
2018-02-15	nscancor	Non-Negative and Sparse CCA
2018-02-15	phangorn	Phylogenetic Reconstruction and Analysis
2018-02-15	politeness	Detecting Politeness Features in Text
2018-02-15	ratesci	Confidence Intervals for Comparisons of Binomial or Poisson Rates
2018-02-15	rmetasim	An Individual-Based Population Genetic Simulation Environment
2018-02-15	sparsesvd	Sparse Truncated Singular Value Decomposition (from 'SVDLIBC')
2018-02-15	teigen	Model-Based Clustering and Classification with the Multivariate t Distribution
2018-02-15	tesseract	Open Source OCR Engine
2018-02-15	vcrpart	Tree-Based Varying Coefficient Regression for Generalized Linear and Ordinal Mixed Models
2018-02-15	VNM	Finding Multiple-Objective Optimal Designs for the 4-Parameter Logistic Model
2018-02-14	cgmanalysis	Clean and Analyze Continuous Glucose Monitor Data
2018-02-14	Chaos01	0-1 Test for Chaos
2018-02-14	CorrectedFDR	Correcting False Discovery Rates
2018-02-14	EMMIXcskew	Fitting Mixtures of CFUST Distributions
2018-02-14	eyetrackingR	Eye-Tracking Data Analysis
2018-02-14	fda.usc	Functional Data Analysis and Utilities for Statistical Computing
2018-02-14	flexclust	Flexible Cluster Algorithms
2018-02-14	FuzzyNumbers	Tools to Deal with Fuzzy Numbers
2018-02-14	healthcareai	Tools for Healthcare Machine Learning
2018-02-14	histry	Enhanced Command History Tracking for R Sessions and Dynamic Documents
2018-02-14	hR	An HR Analytics Toolkit
2018-02-14	HRM	High-Dimensional Repeated Measures
2018-02-14	IATscores	Implicit Association Test Scores Using Robust Statistics
2018-02-14	MDMR	Multivariate Distance Matrix Regression
2018-02-14	merDeriv	Case-Wise and Cluster-Wise Derivatives for Mixed Effects Models
2018-02-14	monitoR	Acoustic Template Detection in R
2018-02-14	mplot	Graphical Model Stability and Variable Selection Procedures
2018-02-14	neldermead	R Port of the 'Scilab' Neldermead Module
2018-02-14	permuco	Permutation Tests for Regression, (Repeated Measures) ANOVA/ANCOVA and Comparison of Signals
2018-02-14	PPtreeViz	Projection Pursuit Classification Tree Visualization
2018-02-14	PUlasso	High-Dimensional Variable Selection with Presence-Only Data
2018-02-14	randtoolbox	Toolbox for Pseudo and Quasi Random Number Generation and RNG Tests
2018-02-14	RcppParallel	Parallel Programming Tools for 'Rcpp'
2018-02-14	Rdpack	Update and Manipulate Rd Documentation Objects
2018-02-14	REBayes	Empirical Bayes Estimation and Inference
2018-02-14	reticulate	Interface to 'Python'
2018-02-14	RJSDMX	R Interface to SDMX Web Services
2018-02-14	RSDA	R to Symbolic Data Analysis
2018-02-14	rsdmx	Tools for Reading SDMX Data and Metadata
2018-02-14	Seurat	Tools for Single Cell Genomics
2018-02-14	spTest	Nonparametric Hypothesis Tests of Isotropy and Symmetry
2018-02-14	ssrm.logmer	Sample Size Determination for Longitudinal Designs with Binary Outcome
2018-02-14	stpp	Space-Time Point Pattern Simulation, Visualisation and Analysis
2018-02-14	svars	Data-Driven Identification of SVAR Models
2018-02-14	TailRank	The Tail-Rank Statistic
2018-02-14	tikzDevice	R Graphics Output in LaTeX Format
2018-02-14	TurtleGraphics	Turtle Graphics
2018-02-13	autothresholdr	An R Port of the 'ImageJ' Plugin 'Auto Threshold'
2018-02-13	bdvis	Biodiversity Data Visualizations
2018-02-13	BH	Boost C++ Header Files
2018-02-13	canvasXpress	Visualization Package for CanvasXpress in R
2018-02-13	clusteredinterference	Causal Effects from Observational Studies with Clustered Interference
2018-02-13	cRegulome	Obtain and Visualize Regulome-Gene Expression Correlations in Cancer
2018-02-13	edgarWebR	SEC Filings Access
2018-02-13	EDMeasure	Dependence Measures via Energy Statistics
2018-02-13	EMMIXskew	The EM Algorithm and Skew Mixture Distribution
2018-02-13	epinet	Epidemic/Network-Related Tools
2018-02-13	fishdata	A Small Collection of Fish Population Datasets
2018-02-13	future.callr	A Future API for Parallel Processing using 'callr'
2018-02-13	GENEAclassify	Segmentation and Classification of Accelerometer Data
2018-02-13	getTBinR	Get WHO Tuberculosis Data
2018-02-13	heavy	Robust Estimation Using Heavy-Tailed Distributions
2018-02-13	inferr	Inferential Statistics
2018-02-13	jtools	Analysis and Presentation of Social Scientific Data
2018-02-13	librarysnapshot	Library Snapshot for Packages and Dependencies in Use by Current Session
2018-02-13	Mediana	Clinical Trial Simulations
2018-02-13	memery	Internet Memes for Data Analysts
2018-02-13	mixture	Finite Gaussian Mixture Models for Clustering and Classification
2018-02-13	mopa	Species Distribution MOdeling with Pseudo-Absences
2018-02-13	MXM	Feature Selection (Including Multiple Solutions) and Bayesian Networks
2018-02-13	ncmeta	Straightforward 'NetCDF' Metadata
2018-02-13	NetworkToolbox	Methods and Measures for Brain, Cognitive, and Psychometric Network Analysis
2018-02-13	nproc	Neyman-Pearson (NP) Classification Algorithms and NP Receiver Operating Characteristic (NP-ROC) Curves
2018-02-13	optimsimplex	R Port of the 'Scilab' Optimsimplex Module
2018-02-13	pdmod	Proximal/Distal Modeling Framework for Pavlovian Conditioning Phenomena
2018-02-13	phonics	Phonetic Spelling Algorithms
2018-02-13	polymapR	Linkage Analysis in Outcrossing Polyploids
2018-02-13	RGF	Regularized Greedy Forest
2018-02-13	rglobi	R Interface to Global Biotic Interactions
2018-02-13	Rilostat	ILO Open Data via Ilostat Bulk Download Facility or SDMX Web Service
2018-02-13	RmecabKo	An 'Rcpp' Interface for Eunjeon Project
2018-02-13	rvg	R Graphics Devices for Vector Graphics Output
2018-02-13	semtree	Recursive Partitioning for Structural Equation Models
2018-02-13	SIS	Sure Independence Screening
2018-02-13	TexExamRandomizer	Personalizes and Randomizes Exams Written in 'LaTeX'
2018-02-13	tmap	Thematic Maps
2018-02-13	tmaptools	Thematic Map Tools
2018-02-13	tuber	Client for the YouTube API
2018-02-13	umx	Structural Equation and Twin Modeling in R
2018-02-12	AnaCoDa	Analysis of Codon Data under Stationarity using a Bayesian Framework
2018-02-12	basicspace	Recovering a Basic Space from Issue Scales
2018-02-12	Bivariate.Pareto	Bivariate Pareto Models
2018-02-12	BlockFeST	Bayesian Calculation of Region-Specific Fixation Index to Detect Local Adaptation
2018-02-12	boostmtree	Boosted Multivariate Trees for Longitudinal Data
2018-02-12	Cluster.OBeu	Cluster Analysis 'OpenBudgets'
2018-02-12	codemetar	Generate 'CodeMeta' Metadata for R Packages
2018-02-12	crypto	Cryptocurrency Market Data
2018-02-12	DynTxRegime	Methods for Estimating Optimal Dynamic Treatment Regimes
2018-02-12	elementR	An Framework for Reducing Elemental LAICPMS Data from Solid Structures
2018-02-12	fastnet	Large-Scale Social Network Analysis
2018-02-12	FENmlm	Fixed Effects Nonlinear Maximum Likelihood Models
2018-02-12	gamm4.test	Comparing Nonlinear Curves and Surface Estimations by Semiparametric Methods
2018-02-12	gglorenz	Plotting Lorenz Curve with the Blessing of 'ggplot2'
2018-02-12	GPCMlasso	Differential Item Functioning in Generalized Partial Credit Models
2018-02-12	GUniFrac	Generalized UniFrac Distances
2018-02-12	ijtiff	TIFF I/O for 'ImageJ' Users
2018-02-12	inca	Integer Calibration
2018-02-12	kmed	Distance-Based k-Medoids
2018-02-12	Lavash	Lava Estimation for the Sum of Sparse and Dense Signals
2018-02-12	microseq	Basic Biological Sequence Handling
2018-02-12	na.tools	Comprehensive Library for Working with Missing (NA) Values in Vectors
2018-02-12	NetLogoR	A Port of 'NetLogo' Functions and Language to R
2018-02-12	npmlda	Nonparametric Models for Longitudinal Data
2018-02-12	Pomic	Pattern Oriented Modelling Information Criterion
2018-02-12	R.filesets	Easy Handling of and Access to Files Organized in Structured Directories
2018-02-12	rentrez	Entrez in R
2018-02-12	revdbayes	Ratio-of-Uniforms Sampling for Bayesian Extreme Value Analysis
2018-02-12	Rlinsolve	Iterative Solvers for (Sparse) Linear System of Equations
2018-02-12	RNentropy	Entropy Based Method for the Detection of Significant Variation in Gene Expression Data
2018-02-12	RNOmni	Omnibus Test for Genetic Association Analysis using the Rank Normal Transformation
2018-02-12	scoring	Proper Scoring Rules
2018-02-12	shinyalert	Easily Create Pretty Popup Messages (Modals) in 'Shiny'
2018-02-12	shinyKGode	An Interactive Application for ODE Parameter Inference Using Gradient Matching
2018-02-12	SolveLS	Iterative Methods for Solving Linear System of Equations
2018-02-12	spMC	Continuous-Lag Spatial Markov Chains
2018-02-12	stability	Stability Analysis of Genotype by Environment Interaction (GEI)
2018-02-12	swCRTdesign	Stepped Wedge Cluster Randomized Trial (SW CRT) Design
2018-02-12	synchronicity	Boost Mutex Functionality in R
2018-02-12	tatoo	Combine and Export Data Frames
2018-02-12	telegram.bot	Develop a 'Telegram Bot' with R
2018-02-12	wallace	A Modular Platform for Reproducible Modeling of Species Niches and Distributions
2018-02-12	WGCNA	Weighted Correlation Network Analysis
2018-02-12	wnominate	Multidimensional Vote Scaling Software
2018-02-11	autoplotly	Automatic Generation of Interactive Visualizations for Popular Statistical Results
2018-02-11	BiodiversityR	Package for Community Ecology and Suitability Analysis
2018-02-11	callr	Call R from R
2018-02-11	countrycode	Convert Country Names and Country Codes
2018-02-11	dendextend	Extending 'dendrogram' Functionality in R
2018-02-11	distrom	Distributed Multinomial Regression
2018-02-11	document	Run 'roxygen2' on (Chunks of) Single Code Files
2018-02-11	estimability	Tools for Assessing Estimability of Linear Predictions
2018-02-11	fakemake	Mock the Unix Make Utility
2018-02-11	fivethirtyeight	Data and Code Behind the Stories and Interactives at 'FiveThirtyEight'
2018-02-11	future	Unified Parallel and Distributed Processing in R for Everyone
2018-02-11	gamlr	Gamma Lasso Regression
2018-02-11	ggfortify	Data Visualization Tools for Statistical Analysis Results
2018-02-11	HDoutliers	Leland Wilkinson's Algorithm for Detecting Multidimensional Outliers
2018-02-11	implyr	R Interface for Apache Impala
2018-02-11	inlabru	Spatial Inference using Integrated Nested Laplace Approximation
2018-02-11	lakemorpho	Lake Morphometry Metrics
2018-02-11	link2GI	Linking Geographic Information Systems, Remote Sensing and Other Command Line Tools
2018-02-11	lmridge	Linear Ridge Regression with Ridge Penalty and Ridge Statistics
2018-02-11	matrixStats	Functions that Apply to Rows and Columns of Matrices (and to Vectors)
2018-02-11	MomTrunc	Moments of Folded and Doubly Truncated Multivariate Distributions
2018-02-11	MultiOrd	Generation of Multivariate Ordinal Variates
2018-02-11	NAM	Nested Association Mapping
2018-02-11	nipals	Principal Components Analysis using NIPALS with Gram-Schmidt Orthogonalization
2018-02-11	OrdNor	Concurrent Generation of Ordinal and Normal Data with Given Correlation Matrix and Marginal Distributions
2018-02-11	pheno2geno	High-Throughput Generation of Genetic Markers and Maps from Molecular Phenotypes for Crosses Between Inbred Strains
2018-02-11	PoisNor	Simultaneous Generation of Multivariate Data with Poisson and Normal Marginals
2018-02-11	robotstxt	A 'robots.txt' Parser and 'Webbot'/'Spider'/'Crawler' Permissions Checker
2018-02-11	rorcid	Interface to the 'Orcid.org' 'API'
2018-02-11	rphast	Interface to 'PHAST' Software for Comparative Genomics
2018-02-11	Rraven	Connecting R and 'Raven' Sound Analysis Software
2018-02-11	RRreg	Correlation and Regression Analyses for Randomized Response Data
2018-02-11	rscala	Bi-Directional Interface Between 'R' and 'Scala' with Callbacks
2018-02-11	rtk	Rarefaction Tool Kit
2018-02-11	smooth	Forecasting Using Smoothing Functions
2018-02-11	snappier	Compress and Decompress 'Snappy' Encoded Data
2018-02-11	spData	Datasets for Spatial Analysis
2018-02-11	subplex	Unconstrained Optimization using the Subplex Algorithm
2018-02-11	summarytools	Tools to Quickly and Neatly Summarize Data
2018-02-11	textir	Inverse Regression for Text Analysis
2018-02-11	VineCopula	Statistical Inference of Vine Copulas
2018-02-11	warbleR	Streamline Bioacoustic Analysis
2018-02-10	BinNor	Simultaneous Generation of Multivariate Binary and Normal Variates
2018-02-10	boxoffice	Downloads Box Office Information for Given Dates (How Much Each Movie Earned in Theaters)
2018-02-10	dataonderivatives	Easily Source Publicly Available Data on Derivatives
2018-02-10	descriptr	Generate Descriptive Statistics & Explore Statistical Distributions
2018-02-10	ensembleEN	Ensembling Regularized Linear Models
2018-02-10	rquery	Relational Query Generator for Data Manipulation
2018-02-10	rrecsys	Environment for Evaluating Recommender Systems
2018-02-10	support.BWS	Basic Functions for Supporting an Implementation of Best-Worst Scaling
2018-02-10	survutils	Utility Functions for Survival Analysis
2018-02-10	tidygraph	A Tidy API for Graph Manipulation
2018-02-09	BSPADATA	Bayesian Proposal to Fit Spatial Econometric Models
2018-02-09	Dykstra	Quadratic Programming using Cyclic Projections
2018-02-09	facilitation	A C++ Framework for Plant-Plant Interaction IBMs
2018-02-09	filesstrings	Handy File and String Manipulation
2018-02-09	hmi	Hierarchical Multiple Imputation
2018-02-09	idealstan	Bayesian IRT Ideal Point Models with 'Stan'
2018-02-09	likeLTD	Tools to Evaluate DNA Profile Evidence
2018-02-09	LSDinterface	Reading LSD Results (.res) Files
2018-02-09	mets	Analysis of Multivariate Event Times
2018-02-09	miceExt	Extension Package to 'mice'
2018-02-09	naniar	Data Structures, Summaries, and Visualisations for Missing Data
2018-02-09	NatureSounds	Animal Sounds for Bioacustic Analysis
2018-02-09	NCutYX	Clustering of Omics Data of Multiple Types with a Multilayer Network Representation
2018-02-09	nonmem2R	Loading NONMEM Output Files and Simulate with Parameter Uncertainty
2018-02-09	npcopTest	Non Parametric Test for Detecting Changes in the Copula
2018-02-09	odkr	'Open Data Kit' ('ODK') R API
2018-02-09	oxcAAR	Interface to 'OxCal' Radiocarbon Calibration
2018-02-09	patentsview	An R Client to the 'PatentsView' API
2018-02-09	psychmeta	Psychometric Meta-Analysis Toolkit
2018-02-09	PwrGSD	Power in a Group Sequential Design
2018-02-09	sme	Smoothing-Splines Mixed-Effects Models
2018-02-09	SoilHyP	Soil Hydraulic Properties
2018-02-09	srp	Smooth-Rough Partitioning of the Regression Coefficients
2018-02-09	tseries	Time Series Analysis and Computational Finance
2018-02-09	vote	Election Vote Counting
2018-02-08	adepro	A 'shiny' Application for the (Audio-)Visualization of Adverse Event Profiles
2018-02-08	adjclust	Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix
2018-02-08	adnuts	No-U-Turn MCMC Sampling for 'ADMB' and 'TMB' Models
2018-02-08	amt	Animal Movement Tools
2018-02-08	BART	Bayesian Additive Regression Trees
2018-02-08	BayesGOF	Bayesian Modeling via Goodness of Fit
2018-02-08	BIGDAWG	Case-Control Analysis of Multi-Allelic Loci
2018-02-08	cmsaf	Tools for CM SAF NetCDF Data
2018-02-08	CoDiNA	Co-Expression Differential Network Analysis
2018-02-08	CUB	A Class of Mixture Models for Ordinal Data
2018-02-08	dendroTools	Linear and Nonlinear Methods for Analyzing Dendroclimatological Data
2018-02-08	dynr	Dynamic Modeling in R
2018-02-08	EmiStatR	Emissions and Statistics in R for Wastewater and Pollutants in Combined Sewer Systems
2018-02-08	evmix	Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation
2018-02-08	fdadensity	Functional Data Analysis for Density Functions by Transformation to a Hilbert Space
2018-02-08	geozoning	Zoning Methods for Spatial Data
2018-02-08	hydrolinks	Hydrologic Network Linking Data and Tools
2018-02-08	ITNr	Analysis of the International Trade Network
2018-02-08	micromap	Linked Micromap Plots
2018-02-08	model4you	Stratified and Personalised Models Based on Model-Based Trees and Forests
2018-02-08	mvoutlier	Multivariate Outlier Detection Based on Robust Methods
2018-02-08	oc	Optimal Classification Roll Call Analysis Software
2018-02-08	OutliersO3	Draws Overview of Outliers (O3) Plots
2018-02-08	qcQpcr	Histone ChIP-Seq qPCR Analyzer
2018-02-08	rcartocolor	'CARTOColors' Palettes
2018-02-08	Rlabkey	Data Exchange Between R and LabKey Server
2018-02-08	SDLfilter	Filtering Satellite-Derived Locations
2018-02-08	specklestar	Reduction of Speckle Data from BTA 6-m Telescope
2018-02-08	SWMPr	Retrieving, Organizing, and Analyzing Estuary Monitoring Data
2018-02-08	vegtable	Handling Vegetation Data Sets
2018-02-08	vqtl	Genome Scans to Accommodate and Target Genetic and Non-Genetic Effects on Trait Variance in Test Crosses
2018-02-08	wpp2017	World Population Prospects 2017
2018-02-07	actuar	Actuarial Functions and Heavy Tailed Distributions
2018-02-07	BVSNLP	Bayesian Variable Selection in High Dimensional Settings using Non-Local Prior
2018-02-07	coefplot	Plots Coefficients from Fitted Models
2018-02-07	DDD	Diversity-Dependent Diversification
2018-02-07	divest	Get Images Out of DICOM Format Quickly
2018-02-07	FADA	Variable Selection for Supervised Classification in High Dimension
2018-02-07	filelock	Portable File Locking
2018-02-07	fulltext	Full Text of 'Scholarly' Articles Across Many Data Sources
2018-02-07	funbarRF	Fungal Species Identification using DNA Barcode with Random Forest
2018-02-07	glarma	Generalized Linear Autoregressive Moving Average Models
2018-02-07	glmtlp	Truncated Lasso Regularized Generalized Linear Models
2018-02-07	jmotif	Time Series Analysis Toolkit Based on Symbolic Aggregate Dicretization, i.e. SAX
2018-02-07	Knoema	Interface to the Knoema API
2018-02-07	LEGIT	Latent Environmental & Genetic InTeraction (LEGIT) Model
2018-02-07	LowRankQP	Low Rank Quadratic Programming
2018-02-07	lutz	Look Up Time Zones of Point Coordinates
2018-02-07	netgwas	Network-Based Genome Wide Association Studies
2018-02-07	nlmixr	Nonlinear Mixed Effects Models in Population Pharmacokinetics and Pharmacodynamics
2018-02-07	powerMediation	Power/Sample Size Calculation for Mediation Analysis
2018-02-07	powerSurvEpi	Power and Sample Size Calculation for Survival Analysis of Epidemiological Studies
2018-02-07	PTXQC	Quality Report Generation for MaxQuant Results
2018-02-07	rAmCharts	JavaScript Charts Tool
2018-02-07	RcppEigen	'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library
2018-02-07	rmcfs	The MCFS-ID Algorithm for Feature Selection and Interdependency Discovery
2018-02-07	rosqp	Quadratic Programming Solver using the 'OSQP' Library
2018-02-07	Rprofet	WOE Transformation and Scorecard Builder
2018-02-07	shape	Functions for Plotting Graphical Shapes, Colors
2018-02-07	SuperExactTest	Exact Test and Visualization of Multi-Set Intersections
2018-02-07	swirlify	A Toolbox for Writing 'swirl' Courses
2018-02-07	TSstudio	Tools for Time Series Analysis and Forecasting
2018-02-07	tstools	A Time Series Toolbox for Official Statistics
2018-02-07	udpipe	Tokenization, Parts of Speech Tagging, Lemmatization and Dependency Parsing with the 'UDPipe' 'NLP' Toolkit
2018-02-07	valuer	Pricing of Variable Annuities
2018-02-07	vcfR	Manipulate and Visualize VCF Data
2018-02-07	VGAM	Vector Generalized Linear and Additive Models
2018-02-07	WindCurves	Tool to Fit Wind Turbine Power Curves
2018-02-06	ADMM	Algorithms using Alternating Direction Method of Multipliers
2018-02-06	agriTutorial	Tutorial Analysis of Some Agricultural Experiments
2018-02-06	bayesmeta	Bayesian Random-Effects Meta-Analysis
2018-02-06	CENFA	Climate and Ecological Niche Factor Analysis
2018-02-06	chinese.misc	Miscellaneous Tools for Chinese Text Mining and More
2018-02-06	CLA	Critical Line Algorithm in Pure R
2018-02-06	climextRemes	Tools for Analyzing Climate Extremes
2018-02-06	clordr	Composite Likelihood Inference for Spatial Ordinal Data with Replications
2018-02-06	cosa	Constrained Optimal Sample Allocation
2018-02-06	DACF	Data Analysis with Ceiling and/or Floor Data
2018-02-06	dataMaid	A Suite of Checks for Identification of Potential Errors in a Data Frame as Part of the Data Screening Process
2018-02-06	detectRUNS	Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes
2018-02-06	DWDLargeR	Fast Algorithms for Large Scale Generalized Distance Weighted Discrimination
2018-02-06	ecespa	Functions for Spatial Point Pattern Analysis
2018-02-06	ggformula	Formula Interface to the Grammar of Graphics
2018-02-06	googlePrintr	Connect to 'Google Cloud Print' API
2018-02-06	hetGP	Heteroskedastic Gaussian Process Modeling and Design under Replication
2018-02-06	joineR	Joint Modelling of Repeated Measurements and Time-to-Event Data
2018-02-06	lavaSearch2	Tools for Model Specification in the Latent Variable Framework
2018-02-06	lira	LInear Regression in Astronomy
2018-02-06	lubridate	Make Dealing with Dates a Little Easier
2018-02-06	mkin	Kinetic Evaluation of Chemical Degradation Data
2018-02-06	MoEClust	Parsimonious Model-Based Clustering with Covariates
2018-02-06	nardl	Nonlinear Cointegrating Autoregressive Distributed Lag Model
2018-02-06	nimble	MCMC, Particle Filtering, and Programmable Hierarchical Modeling
2018-02-06	pmatch	Pattern Matching
2018-02-06	pubh	A Toolbox for Public Health and Epidemiology
2018-02-06	Rdimtools	Dimension Reduction and Estimation Methods
2018-02-06	revtools	Tools to Support Evidence Synthesis
2018-02-06	shades	Simple Colour Manipulation
2018-02-06	SIRItoGTFS	Compare SIRI Datasets to GTFS Tables
2018-02-06	totalcensus	Extract High Resolution Census Data
2018-02-06	valection	Sampler for Verification Studies
2018-02-06	wosr	Clients to the 'Web of Science' and 'InCites' APIs
2018-02-05	bestNormalize	Normalizing Transformation Functions
2018-02-05	biogas	Process Biogas Data and Predict Biogas Production
2018-02-05	cepreader	Read 'CEP' and Legacy 'CANOCO' Files
2018-02-05	ChannelAttribution	Markov Model for the Online Multi-Channel Attribution Problem
2018-02-05	drtmle	Doubly-Robust Nonparametric Estimation and Inference
2018-02-05	dvmisc	Faster Computation of Common Statistics and Miscellaneous Functions
2018-02-05	entropart	Entropy Partitioning to Measure Diversity
2018-02-05	essHist	The Essential Histogram
2018-02-05	eulerr	Area-Proportional Euler and Venn Diagrams with Circles or Ellipses
2018-02-05	fingertipsR	Fingertips Data for Public Health
2018-02-05	frailtyEM	Fitting Frailty Models with the EM Algorithm
2018-02-05	GetTDData	Get Data for Brazilian Bonds (Tesouro Direto)
2018-02-05	ggbuildr	Save Incremental Builds of Plots
2018-02-05	gibble	Geometry Decomposition
2018-02-05	helixvis	Visualize Alpha-Helical Peptide Sequences
2018-02-05	irtDemo	Item Response Theory Demo Collection
2018-02-05	JuniperKernel	Kernel for 'Jupyter'
2018-02-05	kofdata	Get Data from the 'KOF Datenservice' API
2018-02-05	lmodel2	Model II Regression
2018-02-05	lolR	Linear Optimal Low-Rank Projection (LOL)
2018-02-05	mapmisc	Utilities for Producing Maps
2018-02-05	MBC	Multivariate Bias Correction of Climate Model Outputs
2018-02-05	migest	Methods for the Indirect Estimation of Bilateral Migration
2018-02-05	multiApply	Apply Functions to Multiple Multidimensional Arguments
2018-02-05	networktools	Tools for Identifying Important Nodes in Networks
2018-02-05	NeuralNetTools	Visualization and Analysis Tools for Neural Networks
2018-02-05	nord	Arctic Ice Studio's Nord and Group of Seven Inspired Colour Palettes
2018-02-05	PAFit	Generative Mechanism Estimation in Temporal Complex Networks
2018-02-05	pbdBASE	Programming with Big Data – Base Wrappers for Distributed Matrices
2018-02-05	PET	Simulation and Reconstruction of PET Images
2018-02-05	PLMIX	Bayesian Analysis of Finite Mixtures of Plackett-Luce Models for Partial Rankings/Orderings
2018-02-05	population	Models for Simulating Populations
2018-02-05	psycho	Efficient and Publishing-Oriented Workflow for Psychological Science
2018-02-05	qualtRics	Download Qualtrics Survey Data Directly into R
2018-02-05	quantoptr	Algorithms for Quantile- And Mean-Optimal Treatment Regimes
2018-02-05	RaPKod	Random Projection Kernel Outlier Detector
2018-02-05	RiverBuilder	River Generation for Given Data Sets
2018-02-05	ROlogit	Fit Rank-Ordered Logit (RO-Logit) Model
2018-02-05	seriation	Infrastructure for Ordering Objects Using Seriation
2018-02-05	sjPlot	Data Visualization for Statistics in Social Science
2018-02-05	SOMbrero	SOM Bound to Realize Euclidean and Relational Outputs
2018-02-05	survivalsvm	Survival Support Vector Analysis
2018-02-05	ukbtools	Manipulate and Explore UK Biobank Data
2018-02-05	zscorer	Child Anthropometry z-Score Calculator
2018-02-04	aVirtualTwins	Adaptation of Virtual Twins Method from Jared Foster
2018-02-04	bssm	Bayesian Inference of Non-Linear and Non-Gaussian State Space Models
2018-02-04	cancensus	Canadian Census Data and Geography from the 'CensusMapper' API
2018-02-04	CTT	Classical Test Theory Functions
2018-02-04	dclone	Data Cloning and MCMC Tools for Maximum Likelihood Methods
2018-02-04	eda4treeR	Experimental Design and Analysis for Tree Improvement
2018-02-04	funtimes	Functions for Time Series Analysis
2018-02-04	ggalluvial	Alluvial Diagrams in 'ggplot2'
2018-02-04	gk	g-and-k and g-and-h Distribution Functions
2018-02-04	hyperSMURF	Hyper-Ensemble Smote Undersampled Random Forests
2018-02-04	mldr	Exploratory Data Analysis and Manipulation of Multi-Label Data Sets
2018-02-04	optrdd	Optimized Regression Discontinuity Designs
2018-02-04	quadprogXT	Quadratic Programming with Absolute Value Constraints
2018-02-04	railtrails	Data for Trails in the United States from the Rails-to-Trails Conservancy
2018-02-04	rJPSGCS	R-Interface to Gene Drop Simulation from JPSGCS
2018-02-04	rmdshower	'R' 'Markdown' Format for 'shower' Presentations
2018-02-04	rugarch	Univariate GARCH Models
2018-02-04	SASxport	Read and Write 'SAS' 'XPORT' Files
2018-02-04	sjstats	Collection of Convenient Functions for Common Statistical Computations
2018-02-04	spef	Semiparametric Estimating Functions
2018-02-04	spm12r	Wrapper Functions for 'SPM' (Statistical Parametric Mapping) Version 12 from the 'Wellcome' Trust Centre for 'Neuroimaging'
2018-02-04	webdriver	'WebDriver' Client for 'PhantomJS'
2018-02-03	FixedPoint	Algorithms for Finding Fixed Point Vectors of Functions
2018-02-03	fuzzyforest	Fuzzy Forests
2018-02-03	pcev	Principal Component of Explained Variance
2018-02-03	qicharts2	Quality Improvement Charts
2018-02-03	sjmisc	Data and Variable Transformation Functions
2018-02-03	soiltexture	Functions for Soil Texture Plot, Classification and Transformation
2018-02-02	adegenet	Exploratory Analysis of Genetic and Genomic Data
2018-02-02	antitrust	Tools for Antitrust Practitioners
2018-02-02	arsenal	An Arsenal of 'R' Functions for Large-Scale Statistical Summaries
2018-02-02	bayesImageS	Bayesian Methods for Image Segmentation using a Potts Model
2018-02-02	BNN	Bayesian Neural Network for High-Dimensional Nonlinear Variable Selection
2018-02-02	cellWise	Analyzing Data with Cellwise Outliers
2018-02-02	covatest	Tests on Properties of Space-Time Covariance Functions
2018-02-02	crunch	Crunch.io Data Tools
2018-02-02	ddalpha	Depth-Based Classification and Calculation of Data Depth
2018-02-02	detzrcr	Compare Detrital Zircon Suites
2018-02-02	fslr	Wrapper Functions for FSL ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB')
2018-02-02	gcite	Google Citation Parser
2018-02-02	GWASinlps	Nonlocal Prior Based Iterative SNP Selection Tool for Genome-Wide Association Studies
2018-02-02	HEMDAG	Hierarchical Ensemble Methods for Directed Acyclic Graphs
2018-02-02	ICSOutlier	Outlier Detection Using Invariant Coordinate Selection
2018-02-02	miic	Learning Causal or Non-Causal Graphical Models Using Information Theory
2018-02-02	msm	Multi-State Markov and Hidden Markov Models in Continuous Time
2018-02-02	openssl	Toolkit for Encryption, Signatures and Certificates Based on OpenSSL
2018-02-02	pbdRPC	Programming with Big Data – Remote Procedure Call
2018-02-02	pinnacle.API	A Wrapper for the Pinnacle API
2018-02-02	pipeGS	Permutation p-Value Estimation for Gene Set Tests
2018-02-02	pmclust	Parallel Model-Based Clustering using Expectation-Gathering-Maximization Algorithm for Finite Mixture Gaussian Model
2018-02-02	quantreg	Quantile Regression
2018-02-02	RBesT	R Bayesian Evidence Synthesis Tools
2018-02-02	SoyNAM	Soybean Nested Association Mapping Dataset
2018-02-02	SpaDES.addins	Development Tools for 'SpaDES' and 'SpaDES' Modules
2018-02-02	stapler	Simultaneous Truth and Performance Level Estimation
2018-02-02	viridis	Default Color Maps from 'matplotlib'
2018-02-02	wrswoR	Weighted Random Sampling without Replacement
2018-02-02	Zseq	Integer Sequence Generator
2018-02-01	ald	The Asymmetric Laplace Distribution
2018-02-01	asymmetry	Multidimensional Scaling of Asymmetric Data
2018-02-01	awsMethods	Class and Methods Definitions for Packages 'aws', 'adimpro', 'fmri', 'dwi'
2018-02-01	BsMD	Bayes Screening and Model Discrimination
2018-02-01	cbsodataR	Statistics Netherlands (CBS) Open Data API Client
2018-02-01	childhoodmortality	Calculating Childhood Mortality Rates
2018-02-01	cifti	Toolbox for Connectivity Informatics Technology Initiative ('CIFTI') Files
2018-02-01	CLME	Constrained Inference for Linear Mixed Effects Models
2018-02-01	d3heatmap	Interactive Heat Maps Using 'htmlwidgets' and 'D3.js'
2018-02-01	EMCluster	EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution
2018-02-01	fastLink	Fast Probabilistic Record Linkage with Missing Data
2018-02-01	FRESA.CAD	Feature Selection Algorithms for Computer Aided Diagnosis
2018-02-01	GGMselect	Gaussian Graphs Models Selection
2018-02-01	gifti	Reads in 'Neuroimaging' 'GIFTI' Files with Geometry Information
2018-02-01	googleway	Accesses Google Maps APIs to Retrieve Data and Plot Maps
2018-02-01	heatmaply	Interactive Cluster Heat Maps Using 'plotly'
2018-02-01	kirby21.fmri	Example Functional Imaging Data from the Multi-Modal MRI 'Reproducibility' Resource
2018-02-01	kirby21.t1	Example T1 Structural Data from the Multi-Modal MRI 'Reproducibility' Resource
2018-02-01	lqr	Robust Linear Quantile Regression
2018-02-01	matlabr	An Interface for MATLAB using System Calls
2018-02-01	modmarg	Calculating Marginal Effects and Levels with Errors
2018-02-01	neurobase	'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects
2018-02-01	neurohcp	Human 'Connectome' Project Interface
2018-02-01	oem	Orthogonalizing EM
2018-02-01	opticut	Likelihood Based Optimal Partitioning and Indicator Species Analysis
2018-02-01	reReg	Recurrent Event Regression
2018-02-01	rio	A Swiss-Army Knife for Data I/O
2018-02-01	RVowpalWabbit	R Interface to the Vowpal Wabbit
2018-02-01	SensMap	Sensory and Consumer Data Mapping
2018-02-01	solvebio	The Official SolveBio API Client
2018-02-01	SpaDES	Develop and Run Spatially Explicit Discrete Event Simulation Models
2018-02-01	SpaDES.tools	Additional Tools for Developing Spatially Explicit Discrete Event Simulation (SpaDES) Models
2018-02-01	tmle	Targeted Maximum Likelihood Estimation
2018-02-01	topmodel	Implementation of the Hydrological Model TOPMODEL in R
2018-02-01	TraMineRextras	TraMineR Extension
2018-02-01	vdiffr	Visual Regression Testing and Graphical Diffing
2018-02-01	viridisLite	Default Color Maps from 'matplotlib' (Lite Version)
2018-02-01	wTO	Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network
2018-02-01	xmrr	Generate XMR Control Chart Data from Time-Series Data
2018-01-31	attempt	Easy Condition Handling
2018-01-31	DatabionicSwarm	Swarm Intelligence for Self-Organized Clustering
2018-01-31	denoiSeq	Differential Expression Analysis Using a Bottom-Up Model
2018-01-31	detect	Analyzing Wildlife Data with Detection Error
2018-01-31	epanet2toolkit	Call 'EPANET' Functions to Simulate Pipe Networks
2018-01-31	GeneralizedUmatrix	Credible Visualization for Two-Dimensional Projections of Data
2018-01-31	GPareto	Gaussian Processes for Pareto Front Estimation and Optimization
2018-01-31	KarsTS	An Interface for Karstic Time Series
2018-01-31	lemon	Freshing Up your 'ggplot2' Plots
2018-01-31	lidR	Airborne LiDAR Data Manipulation and Visualization for Forestry Applications
2018-01-31	Massign	Simple Matrix Construction
2018-01-31	MixGHD	Model Based Clustering, Classification and Discriminant Analysis Using the Mixture of Generalized Hyperbolic Distributions
2018-01-31	MplusAutomation	An R Package for Facilitating Large-Scale Latent Variable Analyses in Mplus
2018-01-31	mvnfast	Fast Multivariate Normal and Student's t Methods
2018-01-31	nlsr	Functions for Nonlinear Least Squares Solutions
2018-01-31	OOR	Optimistic Optimization in R
2018-01-31	pbdZMQ	Programming with Big Data – Interface to 'ZeroMQ'
2018-01-31	prc	Paired Response Curve
2018-01-31	ProjectionBasedClustering	Projection Based Clustering
2018-01-31	RCrypto	'Httr' Implementation of the 'Coinmarketcap' API
2018-01-31	ri2	Randomization Inference for Randomized Experiments
2018-01-31	rPackedBar	Packed Bar Charts with 'plotly'
2018-01-31	rpdo	Pacific Decadal Oscillation Index Data
2018-01-31	RTriangle	Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator
2018-01-31	SiMRiv	Simulating Multistate Movements in River/Heterogeneous Landscapes
2018-01-31	sjlabelled	Labelled Data Utility Functions
2018-01-31	spant	MR Spectroscopy Analysis Tools
2018-01-31	survminer	Drawing Survival Curves using 'ggplot2'
2018-01-31	tidycensus	Load US Census Boundary and Attribute Data as 'tidyverse' and 'sf'-Ready Data Frames
2018-01-31	xwf	Extrema-Weighted Feature Extraction
2018-01-30	ABPS	The Abnormal Blood Profile Score to Detect Blood Doping
2018-01-30	apcluster	Affinity Propagation Clustering
2018-01-30	asciiruler	Render an ASCII Ruler
2018-01-30	BeSS	Best Subset Selection in Linear, Logistic and CoxPH Models
2018-01-30	colorednoise	Simulate Temporally Autocorrelated Population Time Series
2018-01-30	covTestR	Covariance Matrix Tests
2018-01-30	DataVisualizations	Visualizations of High-Dimensional Data
2018-01-30	desctable	Produce Descriptive and Comparative Tables Easily
2018-01-30	DT	A Wrapper of the JavaScript Library 'DataTables'
2018-01-30	Epi	A Package for Statistical Analysis in Epidemiology
2018-01-30	errorist	Automatically Search Errors or Warnings
2018-01-30	FarmSelect	Factor Adjusted Robust Model Selection
2018-01-30	gaston	Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models
2018-01-30	ggQC	Quality Control Charts for 'ggplot'
2018-01-30	gnorm	Generalized Normal/Exponential Power Distribution
2018-01-30	indelmiss	Insertion Deletion Analysis While Accounting for Possible Missing Data
2018-01-30	iotables	Importing and Manipulating Symmetric Input-Output Tables
2018-01-30	KRIG	Spatial Statistic with Kriging
2018-01-30	mapview	Interactive Viewing of Spatial Data in R
2018-01-30	markophylo	Markov Chain Models for Phylogenetic Trees
2018-01-30	mlegp	Maximum Likelihood Estimates of Gaussian Processes
2018-01-30	morse	Modelling Tools for Reproduction and Survival Data in Ecotoxicology
2018-01-30	mr.raps	Two Sample Mendelian Randomization using Robust Adjusted Profile Score
2018-01-30	MuMIn	Multi-Model Inference
2018-01-30	onewaytests	One-Way Tests in Independent Groups Designs
2018-01-30	personalized	Estimation and Validation Methods for Subgroup Identification and Personalized Medicine
2018-01-30	pracma	Practical Numerical Math Functions
2018-01-30	profmem	Simple Memory Profiling for R
2018-01-30	RBMRB	BMRB Data Access and Visualization
2018-01-30	relatable	Functions for Mapping Key-Value Pairs, Many-to-Many, One-to-Many, and Many-to-One Relations
2018-01-30	rexpokit	R Wrappers for EXPOKIT; Other Matrix Functions
2018-01-30	robustBLME	Robust Bayesian Linear Mixed-Effects Models using ABC
2018-01-30	rpivotTable	Build Powerful Pivot Tables and Dynamically Slice & Dice your Data
2018-01-30	rtfbs	Transcription Factor Binding Site Identification Tool
2018-01-30	scdensity	Shape-Constrained Kernel Density Estimation
2018-01-30	smotefamily	A Collection of Oversampling Techniques for Class Imbalance Problem Based on SMOTE
2018-01-30	spatstat.local	Extension to 'spatstat' for Local Composite Likelihood
2018-01-30	String2AdjMatrix	Creates an Adjacency Matrix from a List of Strings
2018-01-30	sunburstR	'Htmlwidget' for 'Kerry Rodden' 'd3.js' Sequence Sunburst
2018-01-30	tibbletime	Time Aware Tibbles
2018-01-30	timereg	Flexible Regression Models for Survival Data
2018-01-30	TipDatingBeast	Using Tip Dates with Phylogenetic Trees in BEAST (Software for Phylogenetic Analysis)
2018-01-30	WhiteStripe	White Matter Normalization for Magnetic Resonance Images using WhiteStripe
2018-01-30	xpose	Diagnostics for Pharmacometric Models
2018-01-29	atsd	Support Querying Axibase Time-Series Database
2018-01-29	autovarCore	Automated Vector Autoregression Models and Networks
2018-01-29	bmotif	Counting Motifs in Bipartite Networks
2018-01-29	breakDown	Break Down Plots
2018-01-29	checkr	Check Object Classes, Values, Names and Dimensions
2018-01-29	cherry	Multiple Testing Methods for Exploratory Research
2018-01-29	cometExactTest	Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm
2018-01-29	compareGroups	Descriptive Analysis by Groups
2018-01-29	ContaminatedMixt	Model-Based Clustering and Classification with the Multivariate Contaminated Normal Distribution
2018-01-29	dalmatian	Automating the Fitting of Double Linear Mixed Models in 'JAGS'
2018-01-29	dirichletprocess	Build Dirichlet Process Objects for Bayesian Modelling
2018-01-29	dplR	Dendrochronology Program Library in R
2018-01-29	dtwclust	Time Series Clustering Along with Optimizations for the Dynamic Time Warping Distance
2018-01-29	fDMA	Dynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes
2018-01-29	fields	Tools for Spatial Data
2018-01-29	ggraph	An Implementation of Grammar of Graphics for Graphs and Networks
2018-01-29	hdrcde	Highest Density Regions and Conditional Density Estimation
2018-01-29	LendingClub	A Lending Club API Wrapper
2018-01-29	ludic	Linkage Using Diagnosis Codes
2018-01-29	MultipleBubbles	Test and Detection of Explosive Behaviors for Time Series
2018-01-29	netCoin	Interactive Networks with R
2018-01-29	networkR	Network Analysis and Visualization
2018-01-29	NIRStat	Novel Statistical Methods for Studying Near-Infrared Spectroscopy (NIRS) Time Series Data
2018-01-29	phylotate	Phylogenies with Annotations
2018-01-29	qut	Quantile Universal Threshold
2018-01-29	rubias	Bayesian Inference from the Conditional Genetic Stock Identification Model
2018-01-29	seoR	SEO Related Analyses
2018-01-29	sirt	Supplementary Item Response Theory Models
2018-01-29	skynet	Generates Networks from BTS Data
2018-01-29	SpaDES.core	Core Utilities for Developing and Running Spatially Explicit Discrete Event Simulation Models
2018-01-29	spatstat	Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests
2018-01-29	SSDM	Stacked Species Distribution Modelling
2018-01-29	subselect	Selecting Variable Subsets
2018-01-29	tidyr	Easily Tidy Data with 'spread()' and 'gather()' Functions
2018-01-29	tidyRSS	Tidy RSS for R
2018-01-29	timetools	Seasonal/Sequential (Instants/Durations, Even or not) Time Series
2018-01-29	tRophicPosition	Bayesian Trophic Position Calculation with Stable Isotopes
2018-01-29	waver	Calculate Fetch and Wave Energy
2018-01-29	XGR	Exploring Genomic Relations for Enhanced Interpretation Through Enrichment, Similarity, Network and Annotation Analysis
2018-01-28	adehabitat	Analysis of Habitat Selection by Animals
2018-01-28	adehabitatLT	Analysis of Animal Movements
2018-01-28	bcrm	Bayesian Continual Reassessment Method for Phase I Dose-Escalation Trials
2018-01-28	billboarder	Create Interactive Chart with the JavaScript 'Billboard' Library
2018-01-28	brotli	A Compression Format Optimized for the Web
2018-01-28	clustRcompaR	Easy Interface for Clustering a Set of Documents and Exploring Group- Based Patterns
2018-01-28	diffobj	Diffs for R Objects
2018-01-28	digest	Create Compact Hash Digests of R Objects
2018-01-28	excursions	Excursion Sets and Contour Credibility Regions for Random Fields
2018-01-28	glmpath	L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model
2018-01-28	libsoc	Read, Create and Write 'PharmML' Standard Output (so) XML Files
2018-01-28	lwgeom	Bindings to Selected 'liblwgeom' Functions for Simple Features
2018-01-28	mokken	Conducts Mokken Scale Analysis
2018-01-28	mosaicData	Project MOSAIC Data Sets
2018-01-28	narray	Subset- And Name-Aware Array Utility Functions
2018-01-28	oce	Analysis of Oceanographic Data
2018-01-28	quanteda	Quantitative Analysis of Textual Data
2018-01-28	rdomains	Get the Category of Content Hosted by a Domain
2018-01-28	rrBLUP	Ridge Regression and Other Kernels for Genomic Selection
2018-01-28	shinyWidgets	Custom Inputs Widgets for Shiny
2018-01-28	sigr	Succinct and Correct Statistical Summaries for Reports
2018-01-28	stepPlr	L2 Penalized Logistic Regression with Stepwise Variable Selection
2018-01-28	stm	Estimation of the Structural Topic Model
2018-01-28	zeallot	Multiple, Unpacking, and Destructuring Assignment
2018-01-27	ANOVAreplication	Test ANOVA Replications by Means of the Prior Predictive p-Value
2018-01-27	bigtcr	Nonparametric Analysis of Bivariate Gap Time with Competing Risks
2018-01-27	CsChange	Testing for Change in C-Statistic
2018-01-27	epanetReader	Read Epanet Files into R
2018-01-27	FHDI	Fractional Hot Deck and Fully Efficient Fractional Imputation
2018-01-27	icr	Compute Krippendorff's Alpha
2018-01-27	MCMCvis	Tools to Visualize, Manipulate, and Summarize MCMC Output
2018-01-27	rgeopat2	Additional Functions for 'geoPAT' 2.0
2018-01-27	rhandsontable	Interface to the 'Handsontable.js' Library
2018-01-27	tableone	Create 'Table 1' to Describe Baseline Characteristics
2018-01-27	TraMineR	Trajectory Miner: a Toolbox for Exploring and Rendering Sequences
2018-01-27	weco	Western Electric Company Rules (WECO) for Shewhart Control Chart
2018-01-26	aidar	Tools for Reading AIDA Files
2018-01-26	asnipe	Animal Social Network Inference and Permutations for Ecologists
2018-01-26	bcrypt	'Blowfish' Password Hashing Algorithm
2018-01-26	cholera	Amend, Augment and Aid Analysis of John Snow's Cholera Data
2018-01-26	drake	Data Frames in R for Make
2018-01-26	eeptools	Convenience Functions for Education Data
2018-01-26	exampletestr	Help for Writing Unit Tests Based on Function Examples
2018-01-26	fs	Cross-Platform File System Operations Based on 'libuv'
2018-01-26	georob	Robust Geostatistical Analysis of Spatial Data
2018-01-26	GGUM	Generalized Graded Unfolding Model
2018-01-26	googlePolylines	Encoding Coordinates into 'Google' Polylines
2018-01-26	gutenbergr	Download and Process Public Domain Works from Project Gutenberg
2018-01-26	hypergea	Hypergeometric Tests
2018-01-26	ic.infer	Inequality Constrained Inference in Linear Normal Situations
2018-01-26	IndexNumR	Index Number Calculation
2018-01-26	jmuOutlier	Permutation Tests for Nonparametric Statistics
2018-01-26	kokudosuuchi	R Interface to 'Kokudo Suuchi' API
2018-01-26	languagelayeR	Access the 'languagelayer' API
2018-01-26	lavaanPlot	Path Diagrams for Lavaan Models via DiagrammeR
2018-01-26	LSD	Lots of Superior Depictions
2018-01-26	magic	Create and Investigate Magic Squares
2018-01-26	matchingR	Matching Algorithms in R and C++
2018-01-26	mogavs	Multiobjective Genetic Algorithm for Variable Selection in Regression
2018-01-26	multinets	Multilevel Networks Analysis
2018-01-26	mvtnorm	Multivariate Normal and t Distributions
2018-01-26	PlasmaMutationDetector	Tumor Mutation Detection in Plasma
2018-01-26	popkin	Estimate Kinship and FST under Arbitrary Population Structure
2018-01-26	prrd	Parallel Runs of Reverse Depends
2018-01-26	R2DT	Translation of Base R-Like Functions for 'data.table' Objects
2018-01-26	rcongresso	Wraps the API for the Brazilian Chamber of Deputies
2018-01-26	rENA	Epistemic Network Analysis
2018-01-26	reprex	Prepare Reproducible Example Code for Sharing
2018-01-26	ROI	R Optimization Infrastructure
2018-01-26	RunuranGUI	A GUI for the UNU.RAN Random Variate Generators
2018-01-26	sdcMicro	Statistical Disclosure Control Methods for Anonymization of Microdata and Risk Estimation
2018-01-26	SimDesign	Structure for Organizing Monte Carlo Simulation Designs
2018-01-26	TSrepr	Time Series Representations
2018-01-26	unrtf	Extract Text from Rich Text Format (RTF) Documents
2018-01-26	waterfalls	Create Waterfall Charts using 'ggplot2' Simply
2018-01-25	aggregation	p-Value Aggregation Methods
2018-01-25	APML0	Augmented and Penalized Minimization Method L0
2018-01-25	aucm	AUC Maximization
2018-01-25	BAwiR	Analysis of Basketball Data
2018-01-25	bigleaf	Physical and Physiological Ecosystem Properties from Eddy Covariance Data
2018-01-25	censusr	Collect Data from the Census API
2018-01-25	crimCV	Group-Based Modelling of Longitudinal Data
2018-01-25	DBItest	Testing 'DBI' Back Ends
2018-01-25	dendroextras	Extra Functions to Cut, Label and Colour Dendrogram Clusters
2018-01-25	devRate	Quantify the Relationship Between Development Rate and Temperature in Ectotherms
2018-01-25	diagis	Diagnostic Plot and Multivariate Summary Statistics of Weighted Samples from Importance Sampling
2018-01-25	EpiModel	Mathematical Modeling of Infectious Disease Dynamics
2018-01-25	ETLUtils	Utility Functions to Execute Standard Extract/Transform/Load Operations (using Package 'ff') on Large Data
2018-01-25	fabricatr	Imagine Your Data Before You Collect It
2018-01-25	finch	Parse Darwin Core Files
2018-01-25	fst	Lightning Fast Serialization of Data Frames for R
2018-01-25	gradDescent	Gradient Descent for Regression Tasks
2018-01-25	heims	Decode and Validate HEIMS Data from Department of Education, Australia
2018-01-25	HTSSIP	High Throughput Sequencing of Stable Isotope Probing Data Analysis
2018-01-25	icesTAF	Functions to Support the ICES Transparent Assessment Framework
2018-01-25	iotools	I/O Tools for Streaming
2018-01-25	lazyWeave	LaTeX Wrappers for R Users
2018-01-25	mgsub	Safe, Multiple, Simultaneous String Substitution
2018-01-25	MODIS	Acquisition and Processing of MODIS Products
2018-01-25	multiselect	Selecting Combinations of Predictors by Leveraging Multiple AUCs for an Ordered Multilevel Outcome
2018-01-25	pwrFDR	FDR Power
2018-01-25	qrmtools	Tools for Quantitative Risk Management
2018-01-25	quickPlot	A System of Plotting Optimized for Speed and Modularity
2018-01-25	rddapp	Regression Discontinuity Design Application
2018-01-25	reproducible	A Set of Tools that Enhance Reproducibility Beyond Package Management
2018-01-25	RGtk2	R Bindings for Gtk 2.8.0 and Above
2018-01-25	rpsftm	Rank Preserving Structural Failure Time Models
2018-01-25	smacpod	Statistical Methods for the Analysis of Case-Control Point Data
2018-01-25	SSN	Spatial Modeling on Stream Networks
2018-01-25	stranger	Simple Toolkit in R for ANomalies Get, Explain and Report
2018-01-25	valr	Genome Interval Arithmetic in R
2018-01-24	argparse	Command Line Optional and Positional Argument Parser
2018-01-24	BioInstaller	Lightweight Biology Software Installer
2018-01-24	blockcluster	Coclustering Package for Binary, Categorical, Contingency and Continuous Data-Sets
2018-01-24	blogdown	Create Blogs and Websites with R Markdown
2018-01-24	datapasta	R Tools for Data Copy-Pasta
2018-01-24	devFunc	Clear and Condense Argument Check for User-Defined Functions
2018-01-24	epitrix	Small Helpers and Tricks for Epidemics Analysis
2018-01-24	expss	Tables with Labels and Some Useful Functions from Spreadsheets and 'SPSS' Statistics
2018-01-24	FedData	Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources
2018-01-24	gap	Genetic Analysis Package
2018-01-24	generalCorr	Generalized Correlations and Initial Causal Path
2018-01-24	geno2proteo	Finding the DNA and Protein Sequences of Any Genomic or Proteomic Loci
2018-01-24	highlightHTML	Highlight HTML Text and Tables
2018-01-24	hms	Pretty Time of Day
2018-01-24	hutils	Miscellaneous R Functions and Aliases
2018-01-24	jomo	Multilevel Joint Modelling Multiple Imputation
2018-01-24	kerasformula	A High-Level R Interface for Neural Nets
2018-01-24	krm	Kernel Based Regression Models
2018-01-24	letsR	Tools for Data Handling and Analysis in Macroecology
2018-01-24	MAGNAMWAR	A Pipeline for Meta-Genome Wide Association
2018-01-24	Mcomp	Data from the M-Competitions
2018-01-24	microbenchmark	Accurate Timing Functions
2018-01-24	MortHump	Measure the Young Adult Mortality Hump
2018-01-24	MPR.genotyping	Maximum Parsimony of Recombination to Infer Parental Genotypes
2018-01-24	multifluo	Dealing with Several Images of a Same Object Constituted of Different Zones
2018-01-24	neverhpfilter	A Better Alternative to the Hodrick-Prescott Filter
2018-01-24	pgam	Poisson-Gamma Additive Models
2018-01-24	RcppGreedySetCover	Greedy Set Cover
2018-01-24	respirometry	Tools for Conducting Respirometry Experiments
2018-01-24	RInno	An Installation Framework for Shiny Apps
2018-01-24	RInSp	R Individual Specialization (RInSp)
2018-01-24	RJDBC	Provides Access to Databases Through the JDBC Interface
2018-01-24	SamplerCompare	A Framework for Comparing the Performance of MCMC Samplers
2018-01-24	santaR	Short Asynchronous Time-Series Analysis
2018-01-24	scanstatistics	Space-Time Anomaly Detection using Scan Statistics
2018-01-24	showimage	Show an Image on an 'R' Graphics Device
2018-01-24	sigmaNet	Render Graphs Using 'Sigma.js'
2018-01-24	srvyr	'dplyr'-Like Syntax for Summary Statistics of Survey Data
2018-01-24	strandCet	Estimation of Biological Parameters from Stranded Cetaceans
2018-01-24	TCIApathfinder	Client for the Cancer Imaging Archive REST API
2018-01-24	thief	Temporal Hierarchical Forecasting
2018-01-24	TSS.RESTREND	Time Series Segmentation of Residual Trends
2018-01-24	TTR	Technical Trading Rules
2018-01-24	tufte	Tufte's Styles for R Markdown Documents
2018-01-24	vegan	Community Ecology Package
2018-01-24	vein	Vehicular Emissions Inventories
2018-01-24	xml2	Parse XML
2018-01-23	ASICS	Automatic Statistical Identification in Complex Spectra
2018-01-23	BANEScarparkinglite	Working with Car Parking Data for Bath and North East Somerset
2018-01-23	bfp	Bayesian Fractional Polynomials
2018-01-23	BibPlots	Plot Functions for Use in Bibliometrics
2018-01-23	brms	Bayesian Regression Models using Stan
2018-01-23	cattonum	Encode Categorical Features
2018-01-23	civis	R Client for the 'Civis data science API'
2018-01-23	CMatching	Matching Algorithms for Causal Inference with Clustered Data
2018-01-23	crch	Censored Regression with Conditional Heteroscedasticity
2018-01-23	detpack	Density Estimation and Random Number Generation with Distribution Element Trees
2018-01-23	easycsv	Load Multiple 'csv' and 'txt' Tables
2018-01-23	frailtyHL	Frailty Models via Hierarchical Likelihood
2018-01-23	greta	Simple and Scalable Statistical Modelling in R
2018-01-23	hdm	High-Dimensional Metrics
2018-01-23	httk	High-Throughput Toxicokinetics
2018-01-23	jmv	The 'jamovi' Analyses
2018-01-23	MaxentVariableSelection	Selecting the Best Set of Relevant Environmental Variables along with the Optimal Regularization Multiplier for Maxent Niche Modeling
2018-01-23	memapp	The Moving Epidemic Method Web Application
2018-01-23	MRS	Multi-Resolution Scanning for Cross-Sample Differences
2018-01-23	mtsdi	Multivariate Time Series Data Imputation
2018-01-23	odbc	Connect to ODBC Compatible Databases (using the DBI Interface)
2018-01-23	pre	Prediction Rule Ensembles
2018-01-23	RATest	Randomization Tests
2018-01-23	RDocumentation	Integrate R with 'RDocumentation'
2018-01-23	red	IUCN Redlisting Tools
2018-01-23	RQGIS	Integrating R with QGIS
2018-01-23	rtkore	'STK++' Core Library Integration to 'R' using 'Rcpp'
2018-01-23	sensiPhy	Sensitivity Analysis for Comparative Methods
2018-01-23	soilDB	Soil Database Interface
2018-01-23	soundgen	Parametric Voice Synthesis
2018-01-23	sparklyr	R Interface to Apache Spark
2018-01-23	SpatialVx	Spatial Forecast Verification
2018-01-23	surveillance	Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena
2018-01-23	vpc	Create Visual Predictive Checks
2018-01-23	xgboost	Extreme Gradient Boosting
2018-01-23	XLConnect	Excel Connector for R
2018-01-23	XLConnectJars	JAR Dependencies for the XLConnect Package
2018-01-23	Xplortext	Statistical Analysis of Textual Data
2018-01-23	xtractomatic	Accessing Environmental Data from ERD's ERDDAP Server
2018-01-23	zoon	Reproducible, Accessible & Shareable Species Distribution Modelling
2018-01-22	BANOVA	Hierarchical Bayesian ANOVA Models
2018-01-22	BatchGetSymbols	Downloads and Organizes Financial Data for Multiple Tickers
2018-01-22	Bioi	Biological Image Analysis
2018-01-22	cleanNLP	A Tidy Data Model for Natural Language Processing
2018-01-22	crul	HTTP Client
2018-01-22	ECoL	Complexity Measures for Classification Problems
2018-01-22	elect	Estimation of Life Expectancies Using Multi-State Models
2018-01-22	enetLTS	Robust and Sparse Methods for High Dimensional Linear and Logistic Regression
2018-01-22	fastmaRching	Fast Marching Method for Modelling Evolving Boundaries
2018-01-22	gLRTH	Genome-Wide Association and Linkage Analysis under Heterogeneity
2018-01-22	infer	Tidy Statistical Inference
2018-01-22	jcext	Extended Classification of Weather Types
2018-01-22	moderndive	Accompaniment Package to ModernDive: An Introduction to Statistical and Data Sciences via R
2018-01-22	nonnest2	Tests of Non-Nested Models
2018-01-22	OBsMD	Objective Bayesian Model Discrimination in Follow-Up Designs
2018-01-22	OmicsPLS	Perform Two-Way Orthogonal Partial Least Squares
2018-01-22	pals	Color Palettes, Colormaps, and Tools to Evaluate Them
2018-01-22	PAmeasures	Prediction and Accuracy Measures for Nonlinear Models and for Right-Censored Time-to-Event Data
2018-01-22	promote	Client for the 'Alteryx Promote' API
2018-01-22	RRPP	Linear Model Evaluation with Randomized Residuals in a Permutation Procedure
2018-01-22	skpr	Design of Experiments Suite: Generate and Evaluate Optimal Designs
2018-01-22	survey	Analysis of Complex Survey Samples
2018-01-22	tibble	Simple Data Frames
2018-01-22	TimeSeries.OBeu	Time Series Analysis 'OpenBudgets'
2018-01-22	TimeVTree	Survival Analysis of Time Varying Coefficients Using a Tree-Based Approach
2018-01-22	tinytex	Helper Functions to Install and Maintain 'TeX Live', and Compile 'LaTeX' Documents
2018-01-22	tsDyn	Nonlinear Time Series Models with Regime Switching
2018-01-22	uiucthemes	'R' 'Markdown' Themes for 'UIUC' Documents and Presentations
2018-01-22	upwaver	Access 'Upwave' API
2018-01-22	xfun	Miscellaneous Functions by 'Yihui Xie'
2018-01-21	clustermq	Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM)
2018-01-21	CreditRisk	Evaluation of Credit Risk with Structural and Reduced Form Models
2018-01-21	datastructures	Implementation of Core Data Structures
2018-01-21	FindIt	Finding Heterogeneous Treatment Effects
2018-01-21	funModeling	Exploratory Data Analysis and Data Preparation Tool-Box Book
2018-01-21	geophys	Geophysics, Continuum Mechanics, Gravity Modeling
2018-01-21	ICAOD	Optimal Designs for Nonlinear Models
2018-01-21	itsmr	Time Series Analysis Using the Innovations Algorithm
2018-01-21	joineRML	Joint Modelling of Multivariate Longitudinal Data and Time-to-Event Outcomes
2018-01-21	LinkageMapView	Plot Linkage Group Maps with Quantitative Trait Loci
2018-01-21	listenv	Environments Behaving (Almost) as Lists
2018-01-21	MCMCpack	Markov Chain Monte Carlo (MCMC) Package
2018-01-21	MetaLonDA	Metagenomics Longitudinal Differential Abundance Method
2018-01-21	MGLM	Multivariate Response Generalized Linear Models
2018-01-21	nofrills	Low-Cost Anonymous Functions
2018-01-21	PropClust	Propensity Clustering and Decomposition
2018-01-21	Rblpapi	R Interface to 'Bloomberg'
2018-01-21	rMR	Importing Data from Loligo Systems Software, Calculating Metabolic Rates and Critical Tensions
2018-01-21	rSCA	An R Package for Stepwise Cluster Analysis
2018-01-21	RTransProb	Analyze and Forecast Credit Migrations
2018-01-21	scorecard	Credit Risk Scorecard
2018-01-21	snakecase	Convert Strings into any Case
2018-01-21	tropAlgebra	Tropical Algebraic Functions
2018-01-20	castor	Efficient Phylogenetics on Large Trees
2018-01-20	cdata	Fluid Data Transformations
2018-01-20	dat	Tools for Data Manipulation
2018-01-20	equSA	Estimate Directed and Undirected Graphical Models and Construct Networks
2018-01-20	ewoc	Escalation with Overdose Control
2018-01-20	htmlTable	Advanced Tables for Markdown/HTML
2018-01-20	htmlwidgets	HTML Widgets for R
2018-01-20	LoopAnalyst	A Collection of Tools to Conduct Levins' Loop Analysis
2018-01-20	metacom	Analysis of the 'Elements of Metacommunity Structure'
2018-01-20	randomizr	Easy-to-Use Tools for Common Forms of Random Assignment and Sampling
2018-01-20	RClickhouse	A 'DBI' Interface to the 'Yandex Clickhouse' Database Providing Basic 'dplyr' Support
2018-01-20	Rcpp	Seamless R and C++ Integration
2018-01-20	replyr	Reliable Plying of Remote or Big Data with R
2018-01-20	rstan	R Interface to Stan
2018-01-20	Rwave	Time-Frequency Analysis of 1-D Signals
2018-01-20	StanHeaders	C++ Header Files for Stan
2018-01-20	Surrogate	Evaluation of Surrogate Endpoints in Clinical Trials
2018-01-20	svgViewR	3D Animated Interactive Visualizations Using SVG
2018-01-20	unpivotr	Unpivot Complex and Irregular Data Layouts
2018-01-20	urltools	Vectorised Tools for URL Handling and Parsing
2018-01-20	vtreat	A Statistically Sound 'data.frame' Processor/Conditioner
2018-01-20	WVPlots	Common Plots for Analysis
2018-01-19	abjutils	Useful Tools for Jurimetrical Analysis Used by the Brazilian Jurimetrics Association
2018-01-19	adabag	Applies Multiclass AdaBoost.M1, SAMME and Bagging
2018-01-19	AnglerCreelSurveySimulation	Simulate a Bus Route Creel Survey of Anglers
2018-01-19	arrangements	Fast Generators and Iterators for Permutations, Combinations and Partitions
2018-01-19	bayesTFR	Bayesian Fertility Projection
2018-01-19	crossword.r	Generating Crosswords from Word Lists
2018-01-19	descr	Descriptive Statistics
2018-01-19	dmm	Dyadic Mixed Model for Pedigree Data
2018-01-19	dynatopmodel	Implementation of the Dynamic TOPMODEL Hydrological Model
2018-01-19	face	Fast Covariance Estimation for Sparse Functional Data
2018-01-19	glamlasso	Penalization in Large Scale Generalized Linear Array Models
2018-01-19	HDPenReg	High-Dimensional Penalized Regression
2018-01-19	ICcalib	Cox Model with Interval-Censored Starting Time of a Covariate
2018-01-19	jdx	'Java' Data Exchange for 'R' and 'rJava'
2018-01-19	lbreg	Log-Binomial Regression with Constrained Optimization
2018-01-19	LN0SCIs	Simultaneous CIs for Ratios of Means of Log-Normal Populations with Zeros
2018-01-19	longRPart2	Recursive Partitioning of Longitudinal Data
2018-01-19	LSAmitR	Daten, Beispiele und Funktionen zu 'Large-Scale Assessment mit R'
2018-01-19	mvabund	Statistical Methods for Analysing Multivariate Abundance Data
2018-01-19	pivotaltrackR	A Client for the 'Pivotal Tracker' API
2018-01-19	PSW	Propensity Score Weighting Methods for Dichotomous Treatments
2018-01-19	REddyProc	Post Processing of (Half-)Hourly Eddy-Covariance Measurements
2018-01-19	RNAseqNet	Log-Linear Poisson Graphical Model with Hot-Deck Multiple Imputation
2018-01-19	rosetteApi	'Rosette' API
2018-01-19	rrpack	Reduced-Rank Regression
2018-01-19	RSEIS	Seismic Time Series Analysis Tools
2018-01-19	rsMove	Remote Sensing for Movement Ecology
2018-01-19	sp	Classes and Methods for Spatial Data
2018-01-19	spcosa	Spatial Coverage Sampling and Random Sampling from Compact Geographical Strata
2018-01-19	usethis	Automate Package and Project Setup
2018-01-19	wrassp	Interface to the 'ASSP' Library
2018-01-18	bcmaps	Map Layers and Spatial Utilities for British Columbia
2018-01-18	bibliometrix	An R-Tool for Comprehensive Science Mapping Analysis
2018-01-18	binnednp	Nonparametric Estimation for Interval-Grouped Data
2018-01-18	canprot	Chemical Composition of Differential Protein Expression
2018-01-18	causaleffect	Deriving Expressions of Joint Interventional Distributions and Transport Formulas in Causal Models
2018-01-18	cgdsr	R-Based API for Accessing the MSKCC Cancer Genomics Data Server (CGDS)
2018-01-18	ctv	CRAN Task Views
2018-01-18	dtree	Decision Trees
2018-01-18	ensembleBMA	Probabilistic Forecasting using Ensembles and Bayesian Model Averaging
2018-01-18	EnvCpt	Detection of Structural Changes in Climate and Environment Time Series
2018-01-18	experiment	R Package for Designing and Analyzing Randomized Experiments
2018-01-18	furniture	Furniture for Quantitative Scientists
2018-01-18	fuzzywuzzyR	Fuzzy String Matching
2018-01-18	GEOmap	Topographic and Geologic Mapping
2018-01-18	gkmSVM	Gapped-Kmer Support Vector Machine
2018-01-18	GPoM	Generalized Polynomial Modelling
2018-01-18	haven	Import and Export 'SPSS', 'Stata' and 'SAS' Files
2018-01-18	homologene	Quick Access to Homology Information
2018-01-18	PEIP	Geophysical Inverse Theory and Optimization
2018-01-18	PMCMR	Calculate Pairwise Multiple Comparisons of Mean Rank Sums
2018-01-18	propr	Calculating Proportionality Between Vectors of Compositional Data
2018-01-18	PythonInR	Use 'Python' from Within 'R'
2018-01-18	redcapAPI	Interface to 'REDCap'
2018-01-18	Renvlp	Computing Envelope Estimators
2018-01-18	RFOC	Graphics for Spherical Distributions and Earthquake Focal Mechanisms
2018-01-18	rlas	Read and Write 'las' and 'laz' Binary File Formats Used for Remote Sensing Data
2018-01-18	RPMG	Graphical User Interface (GUI) for Interactive R Analysis Sessions
2018-01-18	rreg	Visualization for Norwegian Health Quality Registries
2018-01-18	rTableICC	Random Generation of Contingency Tables
2018-01-18	RTOMO	Visualization for Seismic Tomography
2018-01-18	SDT	Self-Determination Theory Measures
2018-01-18	seminr	Domain-Specific Language for Building PLS Structural Equation Models
2018-01-18	SMMA	Soft Maximin Estimation for Large Scale Array-Tensor Models
2018-01-18	spaMM	Mixed-Effect Models, Particularly Spatial Models
2018-01-18	tfestimators	Interface to 'TensorFlow' Estimators
2018-01-18	TukeyRegion	Tukey Region and Median
2018-01-18	vecsets	Like base::sets Tools But Keeps Duplicate Elements
2018-01-18	zenplots	Zigzag Expanded Navigation Plots
2018-01-18	zoeppritz	Seismic Reflection and Scattering Coefficients
2018-01-17	bbw	Blocked Weighted Bootstrap
2018-01-17	BMRBr	'BMRB' File Downloader
2018-01-17	ClusterR	Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans and K-Medoids Clustering
2018-01-17	conting	Bayesian Analysis of Contingency Tables
2018-01-17	datarobot	'DataRobot' Predictive Modeling API
2018-01-17	dLagM	Time Series Regression Models with Distributed Lag Models
2018-01-17	effectR	Predicts Oomycete Effectors
2018-01-17	GenSA	Generalized Simulated Annealing
2018-01-17	idefix	Efficient Designs for Discrete Choice Experiments
2018-01-17	interp	Interpolation Methods
2018-01-17	junctions	The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages
2018-01-17	keras	R Interface to 'Keras'
2018-01-17	lslx	Semi-Confirmatory Structural Equation Modeling via Penalized Likelihood
2018-01-17	markmyassignment	Automatic Marking of R Assignments
2018-01-17	mau	Decision Models with Multi Attribute Utility Theory
2018-01-17	Miso	Multi-Isotope Labeling for Metabolomics Analysis
2018-01-17	npsf	Nonparametric and Stochastic Efficiency and Productivity Analysis
2018-01-17	PMCMRplus	Calculate Pairwise Multiple Comparisons of Mean Rank Sums Extended
2018-01-17	PWFSLSmoke	Utilities for Working with Air Quality Monitoring Data
2018-01-17	rGroovy	Groovy Language Integration
2018-01-17	Rlda	Bayesian LDA for Mixed-Membership Clustering Analysis
2018-01-17	sumFREGAT	Fast Region-Based Association Tests on Summary Statistics
2018-01-17	tensorflow	R Interface to 'TensorFlow'
2018-01-17	tidypredict	Run Predictions Inside the Database
2018-01-16	adespatial	Multivariate Multiscale Spatial Analysis
2018-01-16	bnpsd	Simulate Genotypes from the BN-PSD Admixture Model
2018-01-16	dawai	Discriminant Analysis with Additional Information
2018-01-16	defrostR	An Amphibian Systematics Tool
2018-01-16	filenamer	Easy Management of File Names
2018-01-16	GCalignR	Simple Peak Alignment for Gas-Chromatography Data
2018-01-16	httptest	A Test Environment for HTTP Requests
2018-01-16	ioncopy	Calling Copy Number Alterations in Amplicon Sequencing Data
2018-01-16	Jdmbs	Monte Carlo Option Pricing Algorithm for Jump Diffusion Models with Correlational Companies
2018-01-16	KernelKnn	Kernel k Nearest Neighbors
2018-01-16	ks	Kernel Smoothing
2018-01-16	LPM	Linear Parametric Models Applied to Hydrological Series
2018-01-16	mazeinda	Monotonic Association on Zero-Inflated Data
2018-01-16	mma	Multiple Mediation Analysis
2018-01-16	natural	Estimating the Error Variance in a High-Dimensional Linear Model
2018-01-16	nngeo	k-Nearest Neighbor Join for Spatial Data
2018-01-16	opencage	Interface to the OpenCage API
2018-01-16	OpenImageR	An Image Processing Toolkit
2018-01-16	optimus	Model Based Diagnostics for Multivariate Cluster Analysis
2018-01-16	optmatch	Functions for Optimal Matching
2018-01-16	palmtree	Partially Additive (Generalized) Linear Model Trees
2018-01-16	prettydoc	Creating Pretty Documents from R Markdown
2018-01-16	randomLCA	Random Effects Latent Class Analysis
2018-01-16	RcppMsgPack	'MsgPack' C++ Header Files and Interface Functions for R
2018-01-16	ROI.plugin.lpsolve	'lp_solve' Plugin for the 'R' Optimization Infrastructure
2018-01-16	searcher	Query Search Interfaces
2018-01-16	sentimentr	Calculate Text Polarity Sentiment
2018-01-16	showtext	Using Fonts More Easily in R Graphs
2018-01-16	simmer.bricks	Helper Methods for 'simmer' Trajectories
2018-01-16	sparseinv	Computation of the Sparse Inverse Subset
2018-01-16	SPCAvRP	Sparse Principal Component Analysis via Random Projections (SPCAvRP)
2018-01-16	splashr	Tools to Work with the 'Splash' 'JavaScript' Rendering and Scraping Service
2018-01-16	StatCharrms	Statistical Analysis of Chemistry, Histopathology, and Reproduction Endpoints Including Repeated Measures and Multi-Generation Studies
2018-01-16	sysfonts	Loading Fonts into R
2018-01-16	TE	Insertion/Deletion Dynamics for Transposable Elements
2018-01-16	textTinyR	Text Processing for Small or Big Data Files
2018-01-16	toolmaRk	Tests for Same-Source of Toolmarks
2018-01-15	bnlearn	Bayesian Network Structure Learning, Parameter Learning and Inference
2018-01-15	CRPClustering	Bayesian Nonparametric Chinese Restaurant Process Clustering with Entropy
2018-01-15	dissever	Spatial Downscaling using the Dissever Algorithm
2018-01-15	easySdcTable	Easy Interface to the Statistical Disclosure Control Package 'sdcTable'
2018-01-15	EDA	Energy Decomposition Analysis
2018-01-15	FREGAT	Family REGional Association Tests
2018-01-15	future.apply	Apply Function to Elements in Parallel using Futures
2018-01-15	ggeffects	Create Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs
2018-01-15	GoogleKnowledgeGraphR	Retrieve Information from 'Google Knowledge Graph' API
2018-01-15	hexbin	Hexagonal Binning Routines
2018-01-15	io	A Unified Framework for Input-Output Operations in R
2018-01-15	kableExtra	Construct Complex Table with 'kable' and Pipe Syntax
2018-01-15	lingtypology	Linguistic Typology and Mapping
2018-01-15	mgcv	Mixed GAM Computation Vehicle with Automatic Smoothness Estimation
2018-01-15	microdemic	'Microsoft Academic' API Client
2018-01-15	miniCRAN	Create a Mini Version of CRAN Containing Only Selected Packages
2018-01-15	photobiologyFilters	Spectral Transmittance Data for Filters
2018-01-15	poppr	Genetic Analysis of Populations with Mixed Reproduction
2018-01-15	r6extended	Extension for 'R6' Base Class
2018-01-15	rNOMADS	An Interface to the NOAA Operational Model Archive and Distribution System
2018-01-15	RPPanalyzer	Reads, Annotates, and Normalizes Reverse Phase Protein Array Data
2018-01-15	seacarb	Seawater Carbonate Chemistry
2018-01-15	tcgsaseq	Time-Course Gene Set Analysis for RNA-Seq Data
2018-01-15	tfdatasets	Interface to 'TensorFlow' Datasets
2018-01-15	TrajDataMining	Trajectories Data Mining
2018-01-14	adaptMCMC	Implementation of a Generic Adaptive Monte Carlo Markov Chain Sampler
2018-01-14	COMBAT	A Combined Association Test for Genes using Summary Statistics
2018-01-14	Compositional	Compositional Data Analysis
2018-01-14	cordillera	Calculation of the OPTICS Cordillera
2018-01-14	Fragman	Fragment Analysis in R
2018-01-14	MonetDBLite	In-Process Version of 'MonetDB'
2018-01-14	pcaPP	Robust PCA by Projection Pursuit
2018-01-14	photobiologyLEDs	Spectral Data for Light-Emitting-Diodes
2018-01-14	pillar	Coloured Formatting for Columns
2018-01-14	rvinecopulib	High Performance Algorithms for Vine Copula Modeling
2018-01-14	shinymaterial	Implement Material Design in Shiny Applications
2018-01-14	textclean	Text Cleaning Tools
2018-01-13	bnclassify	Learning Discrete Bayesian Network Classifiers from Data
2018-01-13	EcoGenetics	Management and Exploratory Analysis of Spatial Data in Landscape Genetics
2018-01-13	Emcdf	Computation and Visualization of Empirical Joint Distribution (Empirical Joint CDF)
2018-01-13	fpc	Flexible Procedures for Clustering
2018-01-13	FRK	Fixed Rank Kriging
2018-01-13	gimms	Download and Process GIMMS NDVI3g Data
2018-01-13	hkclustering	Ensemble Clustering using K Means and Hierarchical Clustering
2018-01-13	IncDTW	Incremental Calculation of Dynamic Time Warping
2018-01-13	lava	Latent Variable Models
2018-01-13	lexicon	Lexicons for Text Analysis
2018-01-13	MatrixEQTL	Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix Operations
2018-01-13	metaSEM	Meta-Analysis using Structural Equation Modeling
2018-01-13	np	Nonparametric Kernel Smoothing Methods for Mixed Data Types
2018-01-13	PGRdup	Discover Probable Duplicates in Plant Genetic Resources Collections
2018-01-13	pointdensityP	Point Density for Geospatial Data
2018-01-13	PSPManalysis	Analysis of Physiologically Structured Population Models
2018-01-13	rgl	3D Visualization Using OpenGL
2018-01-13	RhpcBLASctl	Control the Number of Threads on 'BLAS'
2018-01-13	Rmpfr	R MPFR - Multiple Precision Floating-Point Reliable
2018-01-13	RndTexExams	Build and Grade Multiple Choice Exams with Randomized Content
2018-01-13	SARP.compo	Network-based Interpretation of Changes in Compositional Data
2018-01-13	stubthat	Stubbing Framework for R
2018-01-13	SuperRanker	Sequential Rank Agreement
2018-01-13	TukeyC	Conventional Tukey Test
2018-01-13	uavRmp	UAV Mission Planner
2018-01-13	wunderscraper	Scrape the 'Wunderground' API
2018-01-12	blavaan	Bayesian Latent Variable Analysis
2018-01-12	coga	Convolution of Gamma Distributions
2018-01-12	data.world	Functions and Add-Ins for Working with 'data.world' Data Sets and Projects
2018-01-12	moult	Models for Analysing Moult in Birds
2018-01-12	ngspatial	Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data
2018-01-12	preText	Diagnostics to Assess the Effects of Text Preprocessing Decisions
2018-01-12	PRIMME	Eigenvalues and Singular Values and Vectors from Large Matrices
2018-01-12	qCBA	Quantitative Classification by Association Rules
2018-01-12	Rhpc	Permits *apply() Style Dispatch for 'HPC'
2018-01-12	rSQM	Statistical Downscaling Toolkit for Climate Change Scenario using Non Parametric Quantile Mapping
2018-01-12	rtop	Interpolation of Data with Variable Spatial Support
2018-01-12	yearn	Use and if Needed Install Packages from CRAN, BioConductor, CRAN Archive, and GitHub
2018-01-11	AlleleRetain	Allele Retention, Inbreeding, and Demography
2018-01-11	bayesSurv	Bayesian Survival Regression with Flexible Error and Random Effects Distributions
2018-01-11	bigmemory	Manage Massive Matrices with Shared Memory and Memory-Mapped Files
2018-01-11	DiceView	Plot Methods for Computer Experiments Design and Surrogate
2018-01-11	DirectedClustering	Directed Weighted Clustering Coefficient
2018-01-11	dotCall64	Enhanced Foreign Function Interface Supporting Long Vectors
2018-01-11	esmprep	Data Preparation During and After the Use of the Experience Sampling Methodology (ESM)
2018-01-11	irlba	Fast Truncated Singular Value Decomposition and Principal Components Analysis for Large Dense and Sparse Matrices
2018-01-11	kexpmv	Matrix Exponential using Krylov Subspace Routines
2018-01-11	mapsapi	'sf'-Compatible Interface to 'Google Maps' APIs
2018-01-11	MortalityLaws	Parametric Mortality Models, Life Tables and HMD
2018-01-11	pompom	Person-Oriented Method and Perturbation on the Model
2018-01-11	QCApro	Advanced Functionality for Performing and Evaluating Qualitative Comparative Analysis
2018-01-11	recipes	Preprocessing Tools to Create Design Matrices
2018-01-11	Rrdrand	'DRNG' on Intel CPUs with the 'RdRand' Instruction for R
2018-01-11	spBayesSurv	Bayesian Modeling and Analysis of Spatially Correlated Survival Data
2018-01-11	startup	Friendly R Startup Configuration
2018-01-11	text2vec	Modern Text Mining Framework for R
2018-01-11	tidyhydat	Extract and Tidy Canadian 'Hydrometric' Data
2018-01-11	trackdem	Particle Tracking and Demography
2018-01-11	tsdf	Two-/Three-Stage Designs for Phase 1&2 Clinical Trials
2018-01-10	arules	Mining Association Rules and Frequent Itemsets
2018-01-10	BinOrdNonNor	Concurrent Generation of Binary, Ordinal and Continuous Data
2018-01-10	BivUnifBin	Generation of Bivariate Uniform Data and Its Relation to Bivariate Binary Data
2018-01-10	brant	Test for Parallel Regression Assumption
2018-01-10	changepointsVar	Change-Points Detections for Changes in Variance
2018-01-10	CorrToolBox	Modeling Correlational Magnitude Transformations in Discretization Contexts
2018-01-10	DataExplorer	Data Explorer
2018-01-10	dfcomb	Phase I/II Adaptive Dose-Finding Design for Combination Studies
2018-01-10	dfmta	Phase I/II Adaptive Dose-Finding Design for MTA
2018-01-10	DisHet	Estimate the Gene Expression Levels and Component Proportions of the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor Samples
2018-01-10	DMMF	Daily Based Morgan-Morgan-Finney (DMMF) Soil Erosion Model
2018-01-10	emmeans	Estimated Marginal Means, aka Least-Squares Means
2018-01-10	ExpDE	Modular Differential Evolution for Experimenting with Operators
2018-01-10	FinancialInstrument	Financial Instrument Model Infrastructure and Meta-Data
2018-01-10	flextable	Functions for Tabular Reporting
2018-01-10	globals	Identify Global Objects in R Expressions
2018-01-10	IATScore	Scoring Algorithm for the Implicit Association Test (IAT)
2018-01-10	influxdbr	R Interface to InfluxDB
2018-01-10	ISOpureR	Deconvolution of Tumour Profiles
2018-01-10	kutils	Project Management Tools
2018-01-10	lba	Latent Budget Analysis for Compositional Data
2018-01-10	MBESS	The MBESS R Package
2018-01-10	microplot	Microplots (Sparklines) in 'LaTeX', 'Word', 'HTML', 'Excel'
2018-01-10	motmot.2.0	Models of Trait Macroevolution on Trees
2018-01-10	MultiRNG	Multivariate Pseudo-Random Number Generation
2018-01-10	multiROC	Calculating and Visualizing ROC Curves Across Multi-Class Classifications
2018-01-10	multivariance	Measuring Multivariate Dependence Using Distance Multivariance
2018-01-10	ordinalCont	Ordinal Regression Analysis for Continuous Scales
2018-01-10	pbapply	Adding Progress Bar to '*apply' Functions
2018-01-10	phylosignal	Exploring the Phylogenetic Signal in Continuous Traits
2018-01-10	PoisBinOrdNonNor	Generation of Up to Four Different Types of Variables
2018-01-10	PoisBinOrdNor	Data Generation with Poisson, Binary, Ordinal and Normal Components
2018-01-10	PoisNonNor	Simultaneous Generation of Count and Continuous Data
2018-01-10	QCA	Qualitative Comparative Analysis
2018-01-10	QTLRel	Tools for Mapping of Quantitative Traits of Genetically Related Individuals and Calculating Identity Coefficients from Pedigrees
2018-01-10	R.rsp	Dynamic Generation of Scientific Reports
2018-01-10	RandPro	Random Projection with Classification
2018-01-10	rasterVis	Visualization Methods for Raster Data
2018-01-10	rFSA	Feasible Solution Algorithm for Finding Best Subsets and Interactions
2018-01-10	RMixpanel	API for Mixpanel
2018-01-10	skimr	Compact and Flexible Summaries of Data
2018-01-10	streamMOA	Interface for MOA Stream Clustering Algorithms
2018-01-10	strider	Strided Iterator and Range
2018-01-10	tadaatoolbox	Helpers for Data Analysis and Presentation Focused on Undergrad Psychology
2018-01-10	tdr	Target Diagram
2018-01-10	UnivRNG	Univariate Pseudo-Random Number Generation
2018-01-09	annovarR	Integrated Framework to Annotate Genetic Variants
2018-01-09	ATR	Alternative Tree Representation
2018-01-09	basicTrendline	Add Trendline of Basic Regression Models to Plot
2018-01-09	bullwhipgame	Bullwhip Effect Demo in Shiny
2018-01-09	CAST	'caret' Applications for Spatial-Temporal Models
2018-01-09	easySVG	An Easy SVG Basic Elements Generator
2018-01-09	elevatr	Access Elevation Data from Various APIs
2018-01-09	formulize	Add Formula Interfaces to Modelling Functions
2018-01-09	glmmsr	Fit a Generalized Linear Mixed Model
2018-01-09	grf	Generalized Random Forests (Beta)
2018-01-09	LinkedMatrix	Column-Linked and Row-Linked Matrices
2018-01-09	MatchIt	Nonparametric Preprocessing for Parametric Causal Inference
2018-01-09	OpVaR	Statistical Methods for Modeling Operational Risk
2018-01-09	osmose	Object Oriented Simulator of Marine Ecosystems
2018-01-09	packcircles	Circle Packing
2018-01-09	PCDimension	Finding the Number of Significant Principal Components
2018-01-09	pmap	Process Map Visualization
2018-01-09	ranger	A Fast Implementation of Random Forests
2018-01-09	Rbgs	Reading and Background Subtraction in Videos
2018-01-09	rclimateca	Fetch Climate Data from Environment Canada
2018-01-09	RGBM	LS-TreeBoost and LAD-TreeBoost for Gene Regulatory Network Reconstruction
2018-01-09	rlme	Rank-Based Estimation and Prediction in Random Effects Nested Models
2018-01-09	SNPknock	Knockoffs for Hidden Markov Models and Genomic Data
2018-01-09	sommer	Solving Mixed Model Equations in R
2018-01-09	univOutl	Detection of Univariate Outliers
2018-01-09	visNetwork	Network Visualization using 'vis.js' Library
2018-01-09	walker	Bayesian Regression with Time-Varying Coefficients
2018-01-08	afex	Analysis of Factorial Experiments
2018-01-08	boral	Bayesian Ordination and Regression AnaLysis
2018-01-08	clam	Classical Age-Depth Modelling of Cores from Deposits
2018-01-08	comorbidity	Computing Comorbidity Scores
2018-01-08	comparer	Compare Output and Run Time
2018-01-08	constants	Reference on Constants, Units and Uncertainty
2018-01-08	crochet	Implementation Helper for [ and [<- Of Custom Matrix-Like Types
2018-01-08	csv	Read and Write CSV Files with Selected Conventions
2018-01-08	dprint	Print Tabular Data to Graphics Device
2018-01-08	dynsbm	Dynamic Stochastic Block Models
2018-01-08	factoptd	Factorial Optimal Designs for Two-Colour cDNA Microarray Experiments
2018-01-08	fastDummies	Fast Creation of Dummy (Binary) Columns and Rows from Categorical Variables
2018-01-08	gtWAS	Genome and Transcriptome Wide Association Study
2018-01-08	KSgeneral	Computing P-Values of the K-S Test for (Dis)Continuous Null Distribution
2018-01-08	mistat	Data Sets, Functions and Examples from the Book: "Modern Industrial Statistics" by Kenett, Zacks and Amberti
2018-01-08	netrankr	Analyzing Partial Rankings in Networks
2018-01-08	officer	Manipulation of Microsoft Word and PowerPoint Documents
2018-01-08	ordinalClust	Ordinal Data Clustering, Co-Clustering and Classification
2018-01-08	pmml	Generate PMML for Various Models
2018-01-08	praznik	Collection of Information-Based Feature Selection Filters
2018-01-08	quotedargs	A Way of Writing Functions that Quote their Arguments
2018-01-08	rCBA	CBA Classifier for R
2018-01-08	ReporteRs	Microsoft Word and PowerPoint Documents Generation
2018-01-08	ReporteRsjars	External Jars Required for Package 'ReporteRs'
2018-01-08	sgee	Stagewise Generalized Estimating Equations
2018-01-08	shinyjs	Easily Improve the User Experience of Your Shiny Apps in Seconds
2018-01-08	simstudy	Simulation of Study Data
2018-01-08	spanish	Translate Quantities from Strings Spelled in Spanish to Integer
2018-01-08	SQRL	Database Query Interfaces
2018-01-08	TropFishR	Tropical Fisheries Analysis
2018-01-08	trtf	Transformation Trees and Forests
2018-01-08	TSEtools	Download and Manage Data from Tehran Stock Exchange
2018-01-08	units	Measurement Units for R Vectors
2018-01-08	xptr	Manipulating External Pointer
2018-01-08	zoo	S3 Infrastructure for Regular and Irregular Time Series (Z's Ordered Observations)
2018-01-07	ExplainPrediction	Explanation of Predictions for Classification and Regression Models
2018-01-07	fingerprint	Functions to Operate on Binary Fingerprint Data
2018-01-07	fold	A Self-Describing Dataset Format and Interface
2018-01-07	gets	General-to-Specific (GETS) Modelling and Indicator Saturation Methods
2018-01-07	grove	Wavelet Functional ANOVA Through Markov Groves
2018-01-07	MAINT.Data	Model and Analyse Interval Data
2018-01-07	micemd	Multiple Imputation by Chained Equations with Multilevel Data
2018-01-07	PhenotypeSimulator	Flexible Phenotype Simulation from Different Genetic and Noise Models
2018-01-07	RmarineHeatWaves	Detect Marine Heat Waves and Marine Cold Spells
2018-01-07	rms	Regression Modeling Strategies
2018-01-07	Rnightlights	Satellite Nightlight Data Extraction
2018-01-07	RWeka	R/Weka Interface
2018-01-07	RWekajars	R/Weka Interface Jars
2018-01-06	arfima	Fractional ARIMA (and Other Long Memory) Time Series Modeling
2018-01-06	chillR	Statistical Methods for Phenology Analysis in Temperate Fruit Trees
2018-01-06	chron	Chronological Objects which can Handle Dates and Times
2018-01-06	data.tree	General Purpose Hierarchical Data Structure
2018-01-06	date	Functions for Handling Dates
2018-01-06	DPpackage	Bayesian Nonparametric Modeling in R
2018-01-06	DRR	Dimensionality Reduction via Regression
2018-01-06	fmbasics	Financial Market Building Blocks
2018-01-06	lessR	Less Code, More Results
2018-01-06	LTRCtrees	Survival Trees to Fit Left-Truncated and Right-Censored and Interval-Censored Survival Data
2018-01-06	MetFns	Analysis of Visual Meteor Data
2018-01-06	qlcData	Processing Data for Quantitative Language Comparison (QLC)
2018-01-06	SciViews	SciViews - Main package
2018-01-06	sf	Simple Features for R
2018-01-06	sylly	Hyphenation and Syllable Counting for Text Analysis
2018-01-06	synthpop	Generating Synthetic Versions of Sensitive Microdata for Statistical Disclosure Control
2018-01-06	testthis	Utils and 'RStudio' Addins to Make Testing Even More Fun
2018-01-05	APPEstimation	Adjusted Prediction Model Performance Estimation
2018-01-05	bda	Density Estimation for Grouped Data
2018-01-05	BDgraph	Bayesian Structure Learning in Graphical Models using Birth-Death MCMC
2018-01-05	binst	Data Preprocessing, Binning for Classification and Regression
2018-01-05	bReeze	Functions for Wind Resource Assessment
2018-01-05	coindeskr	Access 'CoinDesk' Bitcoin Price Index API
2018-01-05	CREAM	Clustering of Genomic Regions Analysis Method
2018-01-05	dbplot	Simplifies Plotting Data Inside Databases
2018-01-05	diffusion	Forecast the Diffusion of New Products
2018-01-05	DNetFinder	Estimating Differential Networks under Semiparametric Gaussian Graphical Models
2018-01-05	ellipse	Functions for Drawing Ellipses and Ellipse-Like Confidence Regions
2018-01-05	fdrDiscreteNull	False Discovery Rate Procedures Under Discrete and Heterogeneous Null Distributions
2018-01-05	GPM	Gaussian Process Modeling of Multi-Response Datasets
2018-01-05	LearnGeom	Learning Plane Geometry
2018-01-05	MAPA	Multiple Aggregation Prediction Algorithm
2018-01-05	MatManlyMix	Matrix Clustering with Gaussian and Manly Mixture Models
2018-01-05	metacoder	Tools for Parsing, Manipulating, and Graphing Taxonomic Abundance Data
2018-01-05	mombf	Moment and Inverse Moment Bayes Factors
2018-01-05	mra	Mark-Recapture Analysis
2018-01-05	msaenet	Multi-Step Adaptive Estimation Methods for Sparse Regressions
2018-01-05	paramlink	Parametric Linkage and Other Pedigree Analysis in R
2018-01-05	PartCensReg	Partially Censored Regression Models Based on Heavy-Tailed Distributions
2018-01-05	pbdSLAP	Programming with Big Data – Scalable Linear Algebra Packages
2018-01-05	phuse	Web Application Framework for 'PhUSE' Scripts
2018-01-05	PracTools	Tools for Designing and Weighting Survey Samples
2018-01-05	probout	Unsupervised Multivariate Outlier Probabilities for Large Datasets
2018-01-05	profile	Read, Manipulate, and Write Profiler Data
2018-01-05	ramchoice	Estimation and Inference in Random Attention Models
2018-01-05	rapidraker	Rapid Automatic Keyword Extraction (RAKE) Algorithm
2018-01-05	refinr	Cluster and Merge Similar Values Within a Character Vector
2018-01-05	relSim	Relative Simulator
2018-01-05	remoter	Remote R: Control a Remote R Session from a Local One
2018-01-05	rmumps	Wrapper for MUMPS Library
2018-01-05	RVAideMemoire	Testing and Plotting Procedures for Biostatistics
2018-01-05	sfdct	Constrained Triangulation for Simple Features
2018-01-05	SpatialExtremes	Modelling Spatial Extremes
2018-01-05	taxlist	Handling Taxonomic Lists
2018-01-05	tint	'tint' is not 'Tufte'
2018-01-05	trajr	Animal Trajectory Analysis
2018-01-05	unitedR	Assessment and Evaluation of Formations in United
2018-01-05	walmartAPI	Walmart Open API Wrapper
2018-01-05	washdata	Urban Water and Sanitation Survey Dataset
2018-01-05	wavefunction	Wave Function Representation of Real Distributions
2018-01-05	ziphsmm	Zero-Inflated Poisson Hidden (Semi-)Markov Models
2018-01-04	afCEC	Active Function Cross-Entropy Clustering
2018-01-04	analogsea	Interface to 'Digital Ocean'
2018-01-04	bayesLopod	Bayesian Inference of Landscape Occupancy from Presence-Only Data
2018-01-04	chngpt	Estimation and Hypothesis Testing for Threshold Regression
2018-01-04	codep	Multiscale Codependence Analysis
2018-01-04	CORElearn	Classification, Regression and Feature Evaluation
2018-01-04	coxme	Mixed Effects Cox Models
2018-01-04	crs	Categorical Regression Splines
2018-01-04	CUFF	Charles's Utility Function using Formula
2018-01-04	dad	Three-Way Data Analysis Through Densities
2018-01-04	DoseFinding	Planning and Analyzing Dose Finding Experiments
2018-01-04	extraDistr	Additional Univariate and Multivariate Distributions
2018-01-04	fastrtext	'fastText' Wrapper for Text Classification and Word Representation
2018-01-04	FishResp	An Analytical Tool for Aquatic Respirometry
2018-01-04	fmdates	Financial Market Date Calculations
2018-01-04	GFD	Tests for General Factorial Designs
2018-01-04	git2r	Provides Access to Git Repositories
2018-01-04	gjam	Generalized Joint Attribute Modeling
2018-01-04	gWidgets2RGtk2	Implementation of gWidgets2 for the RGtk2 Package
2018-01-04	gWidgetsRGtk2	Toolkit Implementation of gWidgets for RGtk2
2018-01-04	ipft	Indoor Positioning Fingerprinting Toolset
2018-01-04	janitor	Simple Tools for Examining and Cleaning Dirty Data
2018-01-04	KFAS	Kalman Filter and Smoother for Exponential Family State Space Models
2018-01-04	kstIO	Knowledge Space Theory Input/Output
2018-01-04	LCAvarsel	Variable Selection for Latent Class Analysis
2018-01-04	lhs	Latin Hypercube Samples
2018-01-04	lmvar	Linear Regression with Non-Constant Variances
2018-01-04	LSDsensitivity	Sensitivity Analysis Tools for LSD
2018-01-04	memo	In-Memory Caching for Repeated Computations
2018-01-04	ngstk	Next-Generation Sequencing (NGS) Data Analysis Toolkit
2018-01-04	pbdMPI	Programming with Big Data – Interface to MPI
2018-01-04	PCMRS	Model Response Styles in Partial Credit Models
2018-01-04	ppclust	Probabilistic and Possibilistic Cluster Analysis
2018-01-04	proxy	Distance and Similarity Measures
2018-01-04	R.cache	Fast and Light-Weight Caching (Memoization) of Objects and Results to Speed Up Computations
2018-01-04	RcppAlgos	Tools for Combinatorics and Computational Mathematics
2018-01-04	RcppCNPy	Read-Write Support for 'NumPy' Files via 'Rcpp'
2018-01-04	RCurl	General Network (HTTP/FTP/...) Client Interface for R
2018-01-04	rioja	Analysis of Quaternary Science Data
2018-01-04	rmpw	Causal Mediation Analysis Using Weighting Approach
2018-01-04	Rnumerai	Interface to the Numerai Machine Learning Tournament API
2018-01-04	rptR	Repeatability Estimation for Gaussian and Non-Gaussian Data
2018-01-04	shadow	Geometric Shadow Calculations
2018-01-04	simmer	Discrete-Event Simulation for R
2018-01-04	SparseDC	Implementation of SparseDC Algorithm
2018-01-04	spind	Spatial Methods and Indices
2018-01-04	stacomiR	Fish Migration Monitoring
2018-01-04	tidystringdist	String Distance Calculation with Tidy Data Principles
2018-01-04	tigris	Load Census TIGER/Line Shapefiles
2018-01-04	visvow	A Tool for the Visualization of Vowel Variation
2018-01-03	Ball	Statistical Inference and Sure Independence Screening via Ball Statistics
2018-01-03	BIGL	Biochemically Intuitive Generalized Loewe Model
2018-01-03	BinNonNor	Data Generation with Binary and Continuous Non-Normal Components
2018-01-03	Biolinv	Modelling and Forecasting Biological Invasions
2018-01-03	biomartr	Genomic Data Retrieval
2018-01-03	bsamGP	Bayesian Spectral Analysis Models using Gaussian Process Priors
2018-01-03	burnr	Fire-History Analysis in R
2018-01-03	CATkit	Chronomics Analysis Toolkit (CAT): Periodicity Analysis
2018-01-03	CINNA	Deciphering Central Informative Nodes in Network Analysis
2018-01-03	CMplot	Circle Manhattan Plot
2018-01-03	compound.Cox	Estimation, Gene Selection, and Survival Prediction Based on the Compound Covariate Method Under the Cox Model
2018-01-03	ConvergenceClubs	Finding Convergence Clubs
2018-01-03	DeLorean	Estimates Pseudotimes for Single Cell Expression Data
2018-01-03	discgolf	Discourse API Client
2018-01-03	dlsem	Distributed-Lag Linear Structural Equation Models
2018-01-03	encode	Represent Ordered Lists and Pairs as Strings
2018-01-03	ether	Interaction with the 'Ethereum' Blockchain
2018-01-03	ExtremeBounds	Extreme Bounds Analysis (EBA)
2018-01-03	forecastHybrid	Convenient Functions for Ensemble Time Series Forecasts
2018-01-03	frequencyConnectedness	Spectral Decomposition of Connectedness Measures
2018-01-03	geostatsp	Geostatistical Modelling with Likelihood and Bayes
2018-01-03	hBayesDM	Hierarchical Bayesian Modeling of Decision-Making Tasks
2018-01-03	Hmisc	Harrell Miscellaneous
2018-01-03	httping	'Ping' 'URLs' to Time 'Requests'
2018-01-03	inctools	Incidence Estimation Tools
2018-01-03	kst	Knowledge Space Theory
2018-01-03	kyotil	Utility Functions for Statistical Analysis Report Generation and Monte Carlo Studies
2018-01-03	ltsk	Local Time Space Kriging
2018-01-03	macleish	Retrieve Data from MacLeish Field Station
2018-01-03	mcca	Multi-Category Classification Accuracy
2018-01-03	mekko	Variable Width Bar Charts: Bar Mekko
2018-01-03	MESS	Miscellaneous Esoteric Statistical Scripts
2018-01-03	MetaLandSim	Landscape and Range Expansion Simulation
2018-01-03	miRNAss	Genome-Wide Discovery of Pre-miRNAs with few Labeled Examples
2018-01-03	mixlm	Mixed Model ANOVA and Statistics for Education
2018-01-03	mobForest	Model Based Random Forest Analysis
2018-01-03	mongolite	Fast and Simple 'MongoDB' Client for R
2018-01-03	naivebayes	High Performance Implementation of the Naive Bayes Algorithm
2018-01-03	oaxaca	Blinder-Oaxaca Decomposition
2018-01-03	odr	Optimal Design and Statistical Power of Multilevel Randomized Trials
2018-01-03	pangaear	Client for the 'Pangaea' Database
2018-01-03	PKNCA	Perform Pharmacokinetic Non-Compartmental Analysis
2018-01-03	PoisBinNonNor	Data Generation with Poisson, Binary and Continuous Components
2018-01-03	PoisBinOrd	Data Generation with Poisson, Binary and Ordinal Components
2018-01-03	provenance	Statistical Toolbox for Sedimentary Provenance Analysis
2018-01-03	qualvar	Implements Indices of Qualitative Variation Proposed by Wilcox (1973)
2018-01-03	RcmdrPlugin.NMBU	R Commander Plug-in for University Level Applied Statistics
2018-01-03	rdrobust	Robust Data-Driven Statistical Inference in Regression-Discontinuity Designs
2018-01-03	reinforcelearn	Reinforcement Learning
2018-01-03	RobustGaSP	Robust Gaussian Stochastic Process Emulation
2018-01-03	ropenaq	Accesses Air Quality Data from the Open Data Platform OpenAQ
2018-01-03	rprojroot	Finding Files in Project Subdirectories
2018-01-03	Rsampletrees	MCMC Sampling of Gene Genealogies Conditional on Genetic Data
2018-01-03	rsq	R-Squared and Related Measures
2018-01-03	RtutoR	Shiny Apps for Plotting and Exploratory Analysis
2018-01-03	searchConsoleR	Google Search Console R Client
2018-01-03	SemiCompRisks	Hierarchical Models for Parametric and Semi-Parametric Analyses of Semi-Competing Risks Data
2018-01-03	sofa	Connector to 'CouchDB'
2018-01-03	stargazer	Well-Formatted Regression and Summary Statistics Tables
2018-01-03	tidytree	A Tidy Tool for Phylogenetic Tree Data Manipulation
2018-01-03	trend	Non-Parametric Trend Tests and Change-Point Detection
2018-01-03	utf8	Unicode Text Processing
2018-01-03	wbstats	Programmatic Access to Data and Statistics from the World Bank API
2018-01-03	woeR	Weight of Evidence Based Segmentation of a Variable
2018-01-03	wordcloud2	Create Word Cloud by 'htmlwidget'
2018-01-02	elasticsearchr	A Lightweight Interface for Interacting with Elasticsearch from R
2018-01-02	HydeNet	Hybrid Bayesian Networks Using R and JAGS
2018-01-02	mlrMBO	A Toolbox for Model-Based Optimization of Expensive Black-Box Functions
2017-12-27	PBSmodelling	GUI Tools Made Easy: Interact with Models and Explore Data
2017-12-27	RcppThread	R-Friendly Threading in C++
2017-12-24	ciTools	Confidence or Prediction Intervals, Quantiles, and Probabilities for Statistical Models
2017-12-23	addreg	Additive Regression for Discrete Data
2017-12-23	CytobankBridgeR	Bridging and Extending the CytobankAPI Package in R to the Cytobank Web Application
2017-12-23	rtdists	Response Time Distributions
2017-12-22	conformalClassification	Transductive and Inductive Conformal Predictions for Classification Problems
2017-12-22	dgo	Dynamic Estimation of Group-Level Opinion
2017-12-22	hydroscoper	Interface to Hydroscope
2017-12-22	pKSEA	Prediction-Based Kinase-Substrate Enrichment Analysis
2017-12-22	rust	Ratio-of-Uniforms Simulation with Transformation
2017-12-22	spam	SPArse Matrix
2017-12-22	spectacles	Storing, Manipulating and Analysis Spectroscopy and Associated Data
2017-12-21	alphashape3d	Implementation of the 3D Alpha-Shape for the Reconstruction of 3D Sets from a Point Cloud
2017-12-21	archiDART	Plant Root System Architecture Analysis Using DART and RSML Files
2017-12-21	bdsmatrix	Routines for Block Diagonal Symmetric Matrices
2017-12-21	boxcoxmix	Response Transformations for Random Effect and Variance Component Models
2017-12-21	BullsEyeR	Topic Modelling
2017-12-21	ePCR	Ensemble Penalized Cox Regression for Survival Prediction
2017-12-21	EValue	Sensitivity Analyses for Unmeasured Confounding in Observational Studies and Meta-Analyses
2017-12-21	fdcov	Analysis of Covariance Operators
2017-12-21	fractal	A Fractal Time Series Modeling and Analysis Package
2017-12-21	ggspectra	Extensions to 'ggplot2' for Radiation Spectra
2017-12-21	grapherator	A Modular Multi-Step Graph Generator
2017-12-21	labelVector	Label Attributes for Atomic Vectors
2017-12-21	lme4	Linear Mixed-Effects Models using 'Eigen' and S4
2017-12-21	OptSig	Optimal Level of Significance for Regression and Other Statistical Tests
2017-12-21	PairedData	Paired Data Analysis
2017-12-21	PBIBD	Partially Balanced Incomplete Block Designs
2017-12-21	propagate	Propagation of Uncertainty
2017-12-21	robis	Ocean Biogeographic Information System (OBIS) Client
2017-12-21	RSocrata	Download or Upload 'Socrata' Data Sets
2017-12-21	rstantools	Tools for Developing R Packages Interfacing with 'Stan'
2017-12-21	samplesizeCMH	Power and Sample Size Calculation for the Cochran-Mantel-Haenszel Test
2017-12-21	seaaroundus	Sea Around Us API Wrapper
2017-12-21	simmer.plot	Plotting Methods for 'simmer'
2017-12-21	SimRVPedigree	Simulate Pedigrees Ascertained for a Rare Disease
2017-12-21	simtimer	Datetimes as Integers for Discrete-Event Simulations
2017-12-21	slam	Sparse Lightweight Arrays and Matrices
2017-12-21	spam64	64-Bit Extension of the SPArse Matrix R Package 'spam'
2017-12-21	sparseEigen	Computation of Sparse Eigenvectors of a Matrix
2017-12-21	swatches	Read, Inspect, and Manipulate Color Swatch Files
2017-12-21	Ternary	A Package to Generate Ternary Plots
2017-12-21	TrioSGL	Trio Model with a Combination of Lasso and Group Lasso Regularization
2017-12-21	wikitaxa	Taxonomic Information from 'Wikipedia'
2017-12-21	wtss	An R Client for a Web Time-Series Service
2017-12-20	AnthropMMD	An R-Shiny Application for Smith's Mean Measure of Divergence (MMD)
2017-12-20	BayesianTools	General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics
2017-12-20	bhm	Biomarker Threshold Models
2017-12-20	circlize	Circular Visualization
2017-12-20	configr	An Implementation of Parsing and Writing Configuration File (JSON/INI/YAML/TOML)
2017-12-20	datoramar	Interface to the 'Datorama' API
2017-12-20	dfoptim	Derivative-Free Optimization
2017-12-20	ecm	Build Error Correction Models
2017-12-20	GAS	Generalized Autoregressive Score Models
2017-12-20	gllvm	Generalized Linear Latent Variable Models
2017-12-20	GWmodel	Geographically-Weighted Models
2017-12-20	HMP	Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP
2017-12-20	inpdfr	Analyse Text Documents Using Ecological Tools
2017-12-20	kgc	Koeppen-Geiger Climatic Zones
2017-12-20	MCDA	Functions to Support the Multicriteria Decision Aiding Process
2017-12-20	mdsr	Complement to 'Modern Data Science with R'
2017-12-20	memisc	Management of Survey Data and Presentation of Analysis Results
2017-12-20	MonoPoly	Functions to Fit Monotone Polynomials
2017-12-20	nparACT	Non-Parametric Measures of Actigraphy Data
2017-12-20	OGI	Objective General Index
2017-12-20	picasso	Pathwise Calibrated Sparse Shooting Algorithm
2017-12-20	pinbasic	Fast and Stable Estimation of the Probability of Informed Trading (PIN)
2017-12-20	qrnn	Quantile Regression Neural Network
2017-12-20	remotes	R Package Installation from Remote Repositories, Including 'GitHub'
2017-12-20	rmonad	A Monadic Pipeline System
2017-12-20	RPostgres	'Rcpp' Interface to 'PostgreSQL'
2017-12-20	rxylib	Import XY-Data into R
2017-12-20	SimCop	Simulate from Arbitrary Copulae
2017-12-20	theseus	Analysis and Visualization Tools for Microbial Community Data
2017-12-20	widgetframe	'Htmlwidgets' in Responsive 'iframes'
2017-12-20	xts	eXtensible Time Series
2017-12-19	bridgesampling	Bridge Sampling for Marginal Likelihoods and Bayes Factors
2017-12-19	checkpoint	Install Packages from Snapshots on the Checkpoint Server for Reproducibility
2017-12-19	deisotoper	Detection of Isotope Pattern of a Mass Spectrometric Measurement
2017-12-19	fitur	Fit Univariate Distributions
2017-12-19	GeDS	Geometrically Designed Spline Regression
2017-12-19	ggiraph	Make 'ggplot2' Graphics Interactive
2017-12-19	iprior	Regression Modelling using I-Priors
2017-12-19	labelled	Manipulating Labelled Data
2017-12-19	LaplacesDemon	Complete Environment for Bayesian Inference
2017-12-19	msde	Bayesian Inference for Multivariate Stochastic Differential Equations
2017-12-19	partitionComparison	Implements Measures for the Comparison of Two Partitions
2017-12-19	PathSelectMP	Backwards Variable Selection for Paths using M Plus
2017-12-19	quantregForest	Quantile Regression Forests
2017-12-19	reda	Recurrent Event Data Analysis
2017-12-19	rhmmer	Utilities Parsing 'HMMER' Results
2017-12-19	rhymer	Wrapper for the 'Datamuse' API to Find Rhyming and Associated Words
2017-12-19	stplanr	Sustainable Transport Planning
2017-12-19	taxa	Taxonomic Classes
2017-12-19	tis	Time Indexes and Time Indexed Series
2017-12-19	tmbstan	MCMC Sampling from 'TMB' Model Object using 'Stan'
2017-12-19	withr	Run Code 'With' Temporarily Modified Global State
2017-12-19	ZOIP	ZOIP Distribution, ZOIP Regression, ZOIP Mixed Regression
2017-12-18	adephylo	Exploratory Analyses for the Phylogenetic Comparative Method
2017-12-18	AIG	Automatic Item Generator
2017-12-18	BASiNET	Classification of mRNA and lncRNA Sequences using Complex Network Theory
2017-12-18	bootsPLS	Bootstrap Subsamplings of Sparse Partial Least Squares - Discriminant Analysis for Classification and Signature Identification
2017-12-18	Canopy	Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing
2017-12-18	driftR	Drift Correcting Water Quality Data
2017-12-18	gmfd	Inference and Clustering of Functional Data
2017-12-18	kimisc	Kirill's Miscellaneous Functions
2017-12-18	miceadds	Some Additional Multiple Imputation Functions, Especially for 'mice'
2017-12-18	MortCast	Estimation and Projection of Age-Specific Mortality Rates
2017-12-18	mudfold	Multiple UniDimensional unFOLDing
2017-12-18	partykit	A Toolkit for Recursive Partytioning
2017-12-18	photobiology	Photobiological Calculations
2017-12-18	polyPK	The Pharmacokinetics (PK) of Multi-Component Drugs Using a Metabolomics Approach
2017-12-18	qqplotr	Quantile-Quantile Plot Extensions for 'ggplot2'
2017-12-18	sft	Functions for Systems Factorial Technology Analysis of Data
2017-12-18	SpatialBall	Spatial NBA Visualization and Analysis
2017-12-18	spelling	Tools for Spell Checking in R
2017-12-18	textrank	Summarize Text by Ranking Sentences and Finding Keywords
2017-12-18	Umatrix	Visualization of Structures in High-Dimensional Data
2017-12-17	AmesHousing	The Ames Iowa Housing Data
2017-12-17	CoClust	Copula Based Cluster Analysis
2017-12-17	cowplot	Streamlined Plot Theme and Plot Annotations for 'ggplot2'
2017-12-17	fdasrvf	Elastic Functional Data Analysis
2017-12-17	ForecastComb	Forecast Combination Methods
2017-12-17	FreeSortR	Free Sorting Data Analysis
2017-12-17	littler	R at the Command-Line via 'r'
2017-12-17	mlapi	Abstract Classes for Building 'scikit-learn' Like API
2017-12-17	neatmaps	Heatmaps for Multiple Network Data
2017-12-17	PKPDmisc	Pharmacokinetic and Pharmacodynamic Data Management Functions
2017-12-17	pomp	Statistical Inference for Partially Observed Markov Processes
2017-12-17	SegCorr	Detecting Correlated Genomic Regions
2017-12-17	stringformattr	Dynamic String Formatting
2017-12-17	SyncRNG	A Synchronized Tausworthe RNG for R and Python
2017-12-17	zonator	Utilities for Zonation Spatial Conservation Prioritization Software
2017-12-16	cleanEHR	The Critical Care Clinical Data Processing Tools
2017-12-16	dexter	Data Management and Analysis of Tests
2017-12-16	diveMove	Dive Analysis and Calibration
2017-12-16	drat	'Drat' R Archive Template
2017-12-16	getCRUCLdata	Use and Explore CRU CL v. 2.0 Climatology Elements in R
2017-12-16	gofastr	Fast DocumentTermMatrix and TermDocumentMatrix Creation
2017-12-16	HardyWeinberg	Statistical Tests and Graphics for Hardy-Weinberg Equilibrium
2017-12-16	hunspell	High-Performance Stemmer, Tokenizer, and Spell Checker
2017-12-16	multiplex	Algebraic Tools for the Analysis of Multiple Social Networks
2017-12-16	Select	Determines Species Probabilities Based on Functional Traits
2017-12-15	ade4	Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
2017-12-15	adegraphics	An S4 Lattice-Based Package for the Representation of Multivariate Data
2017-12-15	astsa	Applied Statistical Time Series Analysis
2017-12-15	batchtools	Tools for Computation on Batch Systems
2017-12-15	BClustLonG	A Dirichlet Process Mixture Model for Clustering Longitudinal Gene Expression Data
2017-12-15	bioinactivation	Simulation of Dynamic Microbial Inactivation
2017-12-15	BisRNA	Analysis of RNA Cytosine-5 Methylation
2017-12-15	bomrang	Australian Government Bureau of Meteorology Data from R
2017-12-15	cit	Causal Inference Test
2017-12-15	clustEff	Clusters of Effects Curves in Quantile Regression Models
2017-12-15	earth	Multivariate Adaptive Regression Splines
2017-12-15	ecp	Non-Parametric Multiple Change-Point Analysis of Multivariate Data
2017-12-15	EMSC	Extended Multiplicative Signal Correction
2017-12-15	evtree	Evolutionary Learning of Globally Optimal Trees
2017-12-15	gimme	Group Iterative Multiple Model Estimation
2017-12-15	GMAC	Genomic Mediation Analysis with Adaptive Confounding Adjustment
2017-12-15	GSODR	Global Surface Summary of the Day (GSOD) Weather Data from R
2017-12-15	hypercube	Organizing Data in a Hypercube
2017-12-15	icesAdvice	Functions Related to ICES Advice
2017-12-15	ipumsr	Read 'IPUMS' Extract Files
2017-12-15	irtoys	A Collection of Functions Related to Item Response Theory (IRT)
2017-12-15	optiSel	Optimum Contribution Selection and Population Genetics
2017-12-15	plsVarSel	Variable Selection in Partial Least Squares
2017-12-15	PPforest	Projection Pursuit Classification Forest
2017-12-15	quantregRanger	Quantile Regression Forests for 'ranger'
2017-12-15	spMaps	Europe SpatialPolygonsDataFrame Builder
2017-12-15	storr	Simple Key Value Stores
2017-12-15	woeBinning	Supervised Weight of Evidence Binning of Numeric Variables and Factors
2017-12-14	clickstream	Analyzes Clickstreams Based on Markov Chains
2017-12-14	elo	Elo Ratings
2017-12-14	exprso	Rapid Deployment of Machine Learning Algorithms
2017-12-14	gge	Genotype Plus Genotype-by-Environment Biplots
2017-12-14	gravity	Estimation Methods for Gravity Models
2017-12-14	hsdar	Manage, Analyse and Simulate Hyperspectral Data
2017-12-14	humanleague	Synthetic Population Generator
2017-12-14	mizer	Multi-Species sIZE Spectrum Modelling in R
2017-12-14	multipanelfigure	Infrastructure to Assemble Multi-Panel Figures (from Grobs)
2017-12-14	PBNPA	Permutation Based Non-Parametric Analysis of CRISPR Screen Data
2017-12-14	phmm	Proportional Hazards Mixed-Effects Model (PHMM)
2017-12-14	PooledMeanGroup	Pooled Mean Group Estimation of Dynamic Heterogenous Panels
2017-12-14	RSNPset	Efficient Score Statistics for Genome-Wide SNP Set Analysis
2017-12-14	spAddins	A Set of RStudio Addins
2017-12-14	spatgraphs	Graph Edge Computations for Spatial Point Patterns
2017-12-14	sRDA	Sparse Redundancy Analysis
2017-12-14	stopwords	Multilingual Stopword Lists
2017-12-14	submax	Effect Modification in Observational Studies Using the Submax Method
2017-12-14	syuzhet	Extracts Sentiment and Sentiment-Derived Plot Arcs from Text
2017-12-14	tweedie	Evaluation of Tweedie Exponential Family Models
2017-12-13	backports	Reimplementations of Functions Introduced Since R-3.0.0
2017-12-13	binaryLogic	Binary Logic
2017-12-13	corpustools	Managing, Querying and Analyzing Tokenized Text
2017-12-13	doSNOW	Foreach Parallel Adaptor for the 'snow' Package
2017-12-13	GENEAsphere	Visualisation of Raw or Segmented Accelerometer Data
2017-12-13	GJRM	Generalised Joint Regression Modelling
2017-12-13	hysteresis	Tools for Modeling Rate-Dependent Hysteretic Processes and Ellipses
2017-12-13	LAGOSNE	Interface to the Lake Multi-Scaled Geospatial and Temporal Database
2017-12-13	lexRankr	Extractive Summarization of Text with the LexRank Algorithm
2017-12-13	libcoin	Linear Test Statistics for Permutation Inference
2017-12-13	liftr	Containerize R Markdown Documents
2017-12-13	ltmle	Longitudinal Targeted Maximum Likelihood Estimation
2017-12-13	mexhaz	Mixed Effect Excess Hazard Models
2017-12-13	party	A Laboratory for Recursive Partytioning
2017-12-13	pccc	Pediatric Complex Chronic Conditions
2017-12-13	POPdemog	Plot Population Demographic History
2017-12-13	RIA	Radiomics Image Analysis Toolbox for Grayscale Images
2017-12-13	SensoMineR	Sensory Data Analysis
2017-12-13	spectrolab	Class and Methods for Hyperspectral Data
2017-12-13	testthat	Unit Testing for R
2017-12-12	ChemoSpec	Exploratory Chemometrics for Spectroscopy
2017-12-12	control	A Control Systems Toolbox
2017-12-12	corpus	Text Corpus Analysis
2017-12-12	curl	A Modern and Flexible Web Client for R
2017-12-12	dobson	Data from the GLM Book by Dobson and Barnett
2017-12-12	doMC	Foreach Parallel Adaptor for 'parallel'
2017-12-12	EpiStats	Tools for Epidemiologists
2017-12-12	foreach	Provides Foreach Looping Construct for R
2017-12-12	fscaret	Automated Feature Selection from 'caret'
2017-12-12	fsdaR	Robust Data Analysis Through Monitoring and Dynamic Visualization
2017-12-12	iMRMC	Multi-Reader, Multi-Case Analysis Methods (ROC, Agreement, and Other Metrics)
2017-12-12	inum	Interval and Enum-Type Representation of Vectors
2017-12-12	iterators	Provides Iterator Construct for R
2017-12-12	jagsUI	A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses
2017-12-12	logiBin	Binning Variables to Use in Logistic Regression
2017-12-12	mazealls	Generate Recursive Mazes
2017-12-12	mlt.docreg	Most Likely Transformations: Documentation and Regression Tests
2017-12-12	mmapcharr	Memory-Map Character Files
2017-12-12	mschart	Chart Generation for 'Microsoft Word' and 'Microsoft PowerPoint' Documents
2017-12-12	NanoStringNorm	Normalize NanoString miRNA and mRNA Data
2017-12-12	numform	Tools to Format Numbers for Publication
2017-12-12	prettycode	Pretty Print R Code in the Terminal
2017-12-12	Rnets	Resistance Relationship Networks using Graphical LASSO
2017-12-12	rscorecard	A Method to Download Department of Education College Scorecard Data
2017-12-12	secrlinear	Spatially Explicit Capture-Recapture for Linear Habitats
2017-12-12	sets	Sets, Generalized Sets, Customizable Sets and Intervals
2017-12-12	textreadr	Read Text Documents into R
2017-12-12	XiMpLe	A Simple XML Tree Parser and Generator
2017-12-12	yaml	Methods to Convert R Data to YAML and Back
2017-12-11	catlearn	Formal Psychological Models of Categorization and Learning
2017-12-11	DescTools	Tools for Descriptive Statistics
2017-12-11	dyncomp	Complexity of Short and Coarse-Grained Time Series
2017-12-11	ECharts2Shiny	Embedding Interactive Charts Generated with ECharts Library into Shiny Applications
2017-12-11	epiR	Tools for the Analysis of Epidemiological Data
2017-12-11	europepmc	R Interface to the Europe PubMed Central RESTful Web Service
2017-12-11	filling	Matrix Completion, Imputation, and Inpainting Methods
2017-12-11	fitteR	Fit Hundreds of Theoretical Distributions to Empirical Data
2017-12-11	gamlss	Generalised Additive Models for Location Scale and Shape
2017-12-11	gamlss.dist	Distributions for Generalized Additive Models for Location Scale and Shape
2017-12-11	glmmTMB	Generalized Linear Mixed Models using Template Model Builder
2017-12-11	gMCP	Graph Based Multiple Comparison Procedures
2017-12-11	imp4p	Imputation for Proteomics
2017-12-11	incR	Analysis of Incubation Data
2017-12-11	isoph	Isotonic Proportional Hazards Model
2017-12-11	junr	Access Open Data Through the 'Junar' API
2017-12-11	mdsOpt	Searching for Optimal MDS Procedure for Metric and Interval-Valued Symbolic Data
2017-12-11	minimaxdesign	Minimax and Minimax Projection Designs
2017-12-11	MultiplierDEA	Multiplier Data Envelopment Analysis and Cross Efficiency
2017-12-11	nnfor	Time Series Forecasting with Neural Networks
2017-12-11	OpenMPController	Control Number of OpenMP Threads Dynamically
2017-12-11	ReIns	Functions from "Reinsurance: Actuarial and Statistical Aspects"
2017-12-11	reshape2	Flexibly Reshape Data: A Reboot of the Reshape Package
2017-12-11	RMariaDB	Database Interface and 'MariaDB' Driver
2017-12-11	snplist	Tools to Create Gene Sets
2017-12-11	styler	Non-Invasive Pretty Printing of R Code
2017-12-11	survivalMPL	Penalised Maximum Likelihood for Survival Analysis Models
2017-12-11	symbolicDA	Analysis of Symbolic Data
2017-12-11	TMB	Template Model Builder: A General Random Effect Tool Inspired by 'ADMB'
2017-12-10	caret	Classification and Regression Training
2017-12-10	dynCorr	Dynamic Correlation Package
2017-12-10	ESTER	Efficient Sequential Testing with Evidence Ratios
2017-12-10	JMcmprsk	Joint Models for Longitudinal Measurements and Competing Risks Failure Time Data
2017-12-10	KenSyn	Knowledge Synthesis in Agriculture - From Experimental Network to Meta-Analysis
2017-12-10	meaRtools	Micro-Electro Array (MEA) Analysis
2017-12-10	pdSpecEst	An Analysis Toolbox for Hermitian Positive Definite Matrices
2017-12-10	phylotools	Phylogenetic Tools for Eco-Phylogenetics
2017-12-10	quantmod	Quantitative Financial Modelling Framework
2017-12-10	refset	Subsets with Reference Semantics
2017-12-10	rpostgis	R Interface to a 'PostGIS' Database
2017-12-10	RSNNS	Neural Networks using the Stuttgart Neural Network Simulator (SNNS)
2017-12-10	s2	Google's S2 Library for Geometry on the Sphere
2017-12-10	tabularaster	Tidy Tools for 'Raster' Data
2017-12-10	yaImpute	Nearest Neighbor Observation Imputation and Evaluation Tools
2017-12-09	EFAutilities	Utility Functions for Exploratory Factor Analysis
2017-12-09	lifecontingencies	Financial and Actuarial Mathematics for Life Contingencies
2017-12-09	parsemsf	Parse ThermoFisher MSF Files and Estimate Protein Abundances
2017-12-09	TDA	Statistical Tools for Topological Data Analysis
2017-12-08	broman	Karl Broman's R Code
2017-12-08	ecotox	Analysis of Ecotoxicology
2017-12-08	iheatmapr	Interactive, Complex Heatmaps
2017-12-08	logitnorm	Functions for the Logitnormal Distribution
2017-12-08	momentuHMM	Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models
2017-12-08	NetworkDistance	Distance Measures for Networks
2017-12-08	penaltyLearning	Penalty Learning
2017-12-08	randomcoloR	Generate Attractive Random Colors
2017-12-08	rpf	Response Probability Functions
2017-12-08	rsvd	Randomized Singular Value Decomposition
2017-12-08	s20x	Functions for University of Auckland Course STATS 201/208 Data Analysis
2017-12-08	scrm	Simulating the Evolution of Biological Sequences
2017-12-08	snowflakes	Random Snowflake Generator
2017-12-08	spatialEco	Spatial Analysis and Modelling
2017-12-08	tvR	Total Variation Regularization
2017-12-08	UniDOE	Uniform Design of Experiments
2017-12-08	WARN	Weaning Age Reconstruction with Nitrogen Isotope Analysis
2017-12-08	xray	X Ray Vision on your Datasets
2017-12-07	bayesDP	Tools for the Bayesian Discount Prior Function
2017-12-07	controlTest	Quantile Comparison for Two-Sample Right-Censored Survival Data
2017-12-07	DOBAD	Analysis of Discretely Observed Linear Birth-and-Death(-and-Immigration) Markov Chains
2017-12-07	EpiILMCT	Continuous Time Distance-Based and Network-Based Individual Level Models for Epidemics
2017-12-07	HistDAWass	Histogram-Valued Data Analysis
2017-12-07	icenReg	Regression Models for Interval Censored Data
2017-12-07	jpndistrict	Create Japanese Administration Area and Office Maps
2017-12-07	LabourMarketAreas	Identification, Tuning, Visualisation and Analysis of Labour Market Areas
2017-12-07	manipulateWidget	Add Even More Interactivity to Interactive Charts
2017-12-07	MazamaSpatialUtils	Spatial Data Download and Utility Functions
2017-12-07	MMDai	Multivariate Multinomial Distribution Approximation and Imputation for Incomplete Data
2017-12-07	oddsratio	Odds Ratio Calculation for GAM(M)s & GLM(M)s
2017-12-07	plotrix	Various Plotting Functions
2017-12-07	sampleSelection	Sample Selection Models
2017-12-07	togglr	'Toggl.com' Api for 'Rstudio'
2017-12-06	CPMCGLM	Correction of the P-Value after Multiple Coding in Generalized Linear Models
2017-12-06	cubing	Rubik's Cube Solving
2017-12-06	dartR	Importing and Analysing Snp and Silicodart Data Generated by Genome-Wide Restriction Fragment Analysis
2017-12-06	dlnm	Distributed Lag Non-Linear Models
2017-12-06	earlyR	Estimation of Transmissibility in the Early Stages of a Disease Outbreak
2017-12-06	eha	Event History Analysis
2017-12-06	flipscores	Robust Testing in GLMs
2017-12-06	geniusr	Tools for Working with the 'Genius' API
2017-12-06	gldrm	Generalized Linear Density Ratio Models
2017-12-06	glm.predict	Predicted Values and Discrete Changes for GLM
2017-12-06	gTests	Graph-Based Two-Sample Tests
2017-12-06	Inventorymodel	Inventory Models
2017-12-06	ISM	Interpretive Structural Modelling (ISM)
2017-12-06	iterpc	Efficient Iterator for Permutations and Combinations
2017-12-06	JFE	A Menu-Driven GUI for Analyzing and Modelling Data of Just Finance and Econometrics
2017-12-06	kvh	Read/Write Files in Key-Value-Hierarchy Format
2017-12-06	LassoSIR	Sparsed Sliced Inverse Regression via Lasso
2017-12-06	leaflet.minicharts	Mini Charts for Interactive Maps
2017-12-06	MazamaWebUtils	Utility Functions for Building Web Databrowsers
2017-12-06	meme	Create Meme
2017-12-06	meta	General Package for Meta-Analysis
2017-12-06	MetamapsDB	Network Analysis of Metabolic Pathways and Gene Based Assemblies in Metagenomics
2017-12-06	metasens	Advanced Statistical Methods to Model and Adjust for Bias in Meta-Analysis
2017-12-06	netmeta	Network Meta-Analysis using Frequentist Methods
2017-12-06	projections	Project Future Case Incidence
2017-12-06	PSLM2015	Pakistan Social and Living Standards Measurement Survey 2014-15
2017-12-06	RcppArmadillo	'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library
2017-12-06	regsem	Regularized Structural Equation Modeling
2017-12-06	tm	Text Mining Package
2017-12-06	TriMatch	Propensity Score Matching of Non-Binary Treatments
2017-12-06	vcd	Visualizing Categorical Data
2017-12-06	wmtsa	Wavelet Methods for Time Series Analysis
2017-12-05	CaDENCE	Conditional Density Estimation Network Construction and Evaluation
2017-12-05	deGradInfer	Parameter Inference for Systems of Differential Equation
2017-12-05	edeaR	Exploratory and Descriptive Event-Based Data Analysis
2017-12-05	eventdataR	Event Data Repository
2017-12-05	foghorn	Summarize CRAN Check Results in the Terminal
2017-12-05	GEVcdn	GEV Conditional Density Estimation Network
2017-12-05	ggimage	Use Image in 'ggplot2'
2017-12-05	ghibli	Studio Ghibli Palette Generator
2017-12-05	hexSticker	Create Hexagon Sticker in R
2017-12-05	HMMEsolver	A Fast Solver for Henderson Mixed Model Equation via Row Operations
2017-12-05	lg	Locally Gaussian Distributions: Estimation and Methods
2017-12-05	MetaSubtract	Subtracting Summary Statistics of One or more Cohorts from Meta-GWAS Results
2017-12-05	mltools	Machine Learning Tools
2017-12-05	mmpf	Monte-Carlo Methods for Prediction Functions
2017-12-05	monmlp	Multi-Layer Perceptron Neural Network with Optional Monotonicity Constraints
2017-12-05	NHMSAR	Non-Homogeneous Markov Switching Autoregressive Models
2017-12-05	Nonpareil	Metagenome Coverage Estimation and Projections for 'Nonpareil'
2017-12-05	olsrr	Tools for Building OLS Regression Models
2017-12-05	ordinalNet	Penalized Ordinal Regression
2017-12-05	plotrr	Making Visual Exploratory Data Analysis with Nested Data Easier
2017-12-05	R2BayesX	Estimate Structured Additive Regression Models with 'BayesX'
2017-12-05	scatr	Create Scatter Plots with Marginal Density or Box Plots
2017-12-05	sdols	Summarizing Distributions of Latent Structures
2017-12-05	secrdesign	Sampling Design for Spatially Explicit Capture-Recapture
2017-12-05	sglg	Fitting Semi-Parametric Generalized log-Gamma Regression Models
2017-12-05	sptm	SemiParametric Transformation Model Methods
2017-12-05	VARSEDIG	An Algorithm for Morphometric Characters Selection and Statistical Validation in Morphological Taxonomy
2017-12-05	VWPre	Tools for Preprocessing Visual World Data
2017-12-05	x12	Interface to 'X12-ARIMA'/'X13-ARIMA-SEATS' and Structure for Batch Processing of Seasonal Adjustment
2017-12-04	aprof	Amdahl's Profiler, Directed Optimization Made Easy
2017-12-04	BayesVarSel	Bayes Factors, Model Choice and Variable Selection in Linear Models
2017-12-04	biolink	Create Hyperlinks to Biological Databases and Resources
2017-12-04	boclust	A Clustering Method Based on Boosting on Single Attributes
2017-12-04	bupaR	Business Process Analysis in R
2017-12-04	CollapseLevels	Collapses Levels, Computes Information Value and WoE
2017-12-04	colorSpec	Color Calculations with Emphasis on Spectral Data
2017-12-04	combiter	Combinatorics Iterators
2017-12-04	dae	Functions Useful in the Design and ANOVA of Experiments
2017-12-04	easyVerification	Ensemble Forecast Verification for Large Data Sets
2017-12-04	flora	Tools for Interacting with the Brazilian Flora 2020
2017-12-04	GRS.test	GRS Test for Portfolio Efficiency, Its Statistical Power Analysis, and Optimal Significance Level Calculation
2017-12-04	jpmesh	Utilities for Japanese Mesh Code
2017-12-04	loa	Lattice Options and Add-Ins
2017-12-04	MALDIquantForeign	Import/Export Routines for 'MALDIquant'
2017-12-04	mazeGen	Elithorn Maze Generator
2017-12-04	mdw	Maximum Diversity Weighting
2017-12-04	mutoss	Unified Multiple Testing Procedures
2017-12-04	mutossGUI	A Graphical User Interface for the MuToss Project
2017-12-04	networkGen	Network Maze Generator
2017-12-04	OSTSC	Over Sampling for Time Series Classification
2017-12-04	parallelDist	Parallel Distance Matrix Computation using Multiple Threads
2017-12-04	processmapR	Construct Process Maps Using Event Data
2017-12-04	rEDM	Applications of Empirical Dynamic Modeling from Time Series
2017-12-04	restriktor	Restricted Statistical Estimation and Inference for Linear Models
2017-12-04	ROptSpace	Matrix Reconstruction from a Few Entries
2017-12-04	scatterpie	Scatter Pie Plot
2017-12-04	striprtf	Extract Text from RTF File
2017-12-04	xesreadR	Read and Write XES Files
2017-12-03	coda.base	A Basic Set of Functions for Compositional Data Analysis
2017-12-03	Factoshiny	Perform Factorial Analysis from 'FactoMineR' with a Shiny Application
2017-12-03	hesim	Health-Economic Simulation Modeling and Decision Analysis
2017-12-03	imageData	Aids in Processing and Plotting Data from a Lemna-Tec Scananalyzer
2017-12-03	nCal	Nonlinear Calibration
2017-12-03	rcrossref	Client for Various 'CrossRef' 'APIs'
2017-12-03	registry	Infrastructure for R Package Registries
2017-12-03	robustrank	Robust Rank-Based Tests
2017-12-03	secr	Spatially Explicit Capture-Recapture
2017-12-03	tccox	Treatment Choice Cox Model
2017-12-02	EAinference	Estimator Augmentation and Simulation-Based Inference
2017-12-02	generalhoslem	Goodness of Fit Tests for Logistic Regression Models
2017-12-02	phyclust	Phylogenetic Clustering (Phyloclustering)
2017-12-02	ROI.models.globalOptTests	'ROI' Optimization Problems Based on 'globalOptTests'
2017-12-02	rtypeform	Interface to 'typeform' Results
2017-12-01	C50	C5.0 Decision Trees and Rule-Based Models
2017-12-01	Cubist	Rule- And Instance-Based Regression Modeling
2017-12-01	findpython	Functions to Find an Acceptable Python Binary
2017-12-01	gdpc	Generalized Dynamic Principal Components
2017-12-01	geosapi	GeoServer REST API R Interface
2017-12-01	h2o	R Interface for H2O
2017-12-01	harrietr	Wrangle Phylogenetic Distance Matrices and Other Utilities
2017-12-01	lrgs	Linear Regression by Gibbs Sampling
2017-12-01	magick	Advanced Graphics and Image-Processing in R
2017-12-01	mlbgameday	Tools to Gather Data from Major League Baseball Advanced Media (MLBAM)
2017-12-01	NestedCategBayesImpute	Modeling and Generating Synthetic Versions of Nested Categorical Data in the Presence of Impossible Combinations
2017-12-01	NetworkInference	Inferring Latent Diffusion Networks
2017-12-01	Numero	Statistical Framework to Define Subgroups in Complex Datasets
2017-12-01	perturbR	Random Perturbation of Count Matrices
2017-12-01	plumber	An API Generator for R
2017-12-01	RDS	Respondent-Driven Sampling
2017-12-01	SetMethods	Functions for Set-Theoretic Multi-Method Research and Advanced QCA
2017-12-01	splines2	Regression Spline Functions and Classes
2017-12-01	vegan3d	Static and Dynamic 3D Plots for the 'vegan' Package
2017-12-01	velox	Fast Raster Manipulation and Extraction
2017-12-01	whereport	Geolocalization of IATA Codes
2017-12-01	wnl	Minimization Tool for Pharmacokinetic-Pharmacodynamic Data Analysis
2017-11-30	adapr	Implementation of an Accountable Data Analysis Process
2017-11-30	BatchExperiments	Statistical Experiments on Batch Computing Clusters
2017-11-30	BGGE	Bayesian Genomic Linear Models Applied to GE Genome Selection
2017-11-30	bucky	Bucky's Archive for Data Analysis in the Social Sciences
2017-11-30	clusterSim	Searching for Optimal Clustering Procedure for a Data Set
2017-11-30	constellation	Identify Event Sequences Using Time Series Joins
2017-11-30	excerptr	Excerpt Structuring Comments from Your Code File and Set a Table of Contents
2017-11-30	flexdashboard	R Markdown Format for Flexible Dashboards
2017-11-30	float	32-Bit Floats
2017-11-30	geojsonR	A GeoJson Processing Toolkit
2017-11-30	goftte	Goodness-of-Fit for Time-to-Event Data
2017-11-30	lmerTest	Tests in Linear Mixed Effects Models
2017-11-30	nonmemica	Create and Evaluate NONMEM Models in a Project Context
2017-11-30	npregfast	Nonparametric Estimation of Regression Models with Factor-by-Curve Interactions
2017-11-30	oec	Observatory of Economic Complexity API Wrapper and Utility Program
2017-11-30	passport	Travel Smoothly Between Country Name and Code Formats
2017-11-30	SASmarkdown	'SAS' Markdown
2017-11-30	segmented	Regression Models with Break-Points / Change-Points Estimation
2017-11-30	SPOT	Sequential Parameter Optimization Toolbox
2017-11-30	SUMMER	Spatio-Temporal Under-Five Mortality Methods for Estimation
2017-11-30	Thermimage	Thermal Image Analysis
2017-11-30	tidyinftheo	Some Information-Theoretic Functions in the 'Tidy' Style
2017-11-30	TotalCopheneticIndex	Total Cophenetic Index: An R Package to Quantify Tree Balance
2017-11-29	agridat	Agricultural Datasets
2017-11-29	beast	Bayesian Estimation of Change-Points in the Slope of Multivariate Time-Series
2017-11-29	bmlm	Bayesian Multilevel Mediation
2017-11-29	ccfa	Continuous Counterfactual Analysis
2017-11-29	GWSDAT	GroundWater Spatiotemporal Data Analysis Tool (GWSDAT)
2017-11-29	lmomPi	(Precipitation) Frequency Analysis and Variability with L-Moments from 'lmom'
2017-11-29	MDSMap	High Density Genetic Linkage Mapping using Multidimensional Scaling
2017-11-29	mirt	Multidimensional Item Response Theory
2017-11-29	MUS	Monetary Unit Sampling and Estimation Methods, Widely Used in Auditing
2017-11-29	mvord	Multivariate Ordinal Regression Models
2017-11-29	NipponMap	Japanese Map Data and Functions
2017-11-29	StrainRanking	Ranking of Pathogen Strains
2017-11-29	streambugs	Parametric Ordinary Differential Equations Model of Growth, Death, and Respiration of Macroinvertebrate and Algae Taxa
2017-11-29	webshot	Take Screenshots of Web Pages
2017-11-28	adehabitatHR	Home Range Estimation
2017-11-28	adehabitatHS	Analysis of Habitat Selection by Animals
2017-11-28	adehabitatMA	Tools to Deal with Raster Maps
2017-11-28	ANN2	Artificial Neural Networks for Anomaly Detection
2017-11-28	asbio	A Collection of Statistical Tools for Biologists
2017-11-28	AssocAFC	Allele Frequency Comparison
2017-11-28	BALCONY	Better ALignment CONsensus analYsis
2017-11-28	BatchJobs	Batch Computing with R
2017-11-28	coin	Conditional Inference Procedures in a Permutation Test Framework
2017-11-28	dbmss	Distance-Based Measures of Spatial Structures
2017-11-28	decisionSupport	Quantitative Support of Decision Making under Uncertainty
2017-11-28	Dforest	Decision Forest
2017-11-28	ems	Epimed Solutions Collection for Data Editing, Analysis, and Benchmarking of Health Units
2017-11-28	geometa	Tools for Reading and Writing ISO/OGC Geographic Metadata
2017-11-28	GetHFData	Download and Aggregate High Frequency Trading Data from Bovespa
2017-11-28	GetLattesData	Reading Bibliometric Data from Lattes Platform
2017-11-28	ggFacetSample	Show Large Facet Dimensions by Sampling
2017-11-28	IndepTest	Nonparametric Independence Tests Based on Entropy Estimation
2017-11-28	jointseg	Joint Segmentation of Multivariate (Copy Number) Signals
2017-11-28	mosaic	Project MOSAIC Statistics and Mathematics Teaching Utilities
2017-11-28	mosaicCore	Common Utilities for Other MOSAIC-Family Packages
2017-11-28	Nippon	Japanese Utility Functions and Data
2017-11-28	outbreaker2	Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
2017-11-28	plantecophys	Modelling and Analysis of Leaf Gas Exchange Data
2017-11-28	preference	2-Stage Clinical Trial Design and Analysis
2017-11-28	Sim.DiffProc	Simulation of Diffusion Processes
2017-11-28	Sim.PLFN	Simulation of Piecewise Linear Fuzzy Numbers
2017-11-28	tipr	Tipping Point Analyses
2017-11-28	xltabr	Automatically Write Beautifully Formatted Cross Tabulations/Contingency Tables to Excel
2017-11-27	ballr	Access to Current and Historical Basketball Data
2017-11-27	ceg	Chain Event Graph
2017-11-27	EvolutionaryGames	Important Concepts of Evolutionary Game Theory
2017-11-27	gap.datasets	Datasets for 'gap'
2017-11-27	geecure	Marginal Proportional Hazards Mixture Cure Models with Generalized Estimating Equations
2017-11-27	highriskzone	Determining and Evaluating High-Risk Zones
2017-11-27	odk	Convert 'ODK' or 'XLSForm' to 'SPSS' Data Frame
2017-11-27	phase1RMD	Repeated Measurement Design for Phase I Clinical Trial
2017-11-27	PNADcIBGE	Downloading, Reading and Analysing PNADc Microdata
2017-11-27	PolynomF	Polynomials in R
2017-11-27	repo	A Data-Centered Data Flow Manager
2017-11-27	simEd	Simulation Education
2017-11-27	skeleSim	Genetic Simulation Engine
2017-11-27	SpatialFloor	Spatial Floor Simulation (Isotropic)
2017-11-27	texteffect	Discovering Latent Treatments in Text Corpora and Estimating Their Causal Effects
2017-11-27	trackeR	Infrastructure for Running and Cycling Data from GPS-Enabled Tracking Devices
2017-11-27	tvReg	Time-Varying Coefficients Linear Regression for Single and Multiple Equations
2017-11-27	voteogram	United States House and Senate Voting Cartogram Generators
2017-11-26	asciiSetupReader	Reads 'SPSS' and 'SAS' Files from ASCII Data Files (.txt) and Setup Files (.sps or .sas)
2017-11-26	EKMCMC	MCMC Procedures for Estimating Enzyme Kinetics Constants
2017-11-26	errors	Error Propagation for R Vectors
2017-11-26	FarmTest	Factor Adjusted Robust Multiple Testing
2017-11-26	intrinsicDimension	Intrinsic Dimension Estimation
2017-11-26	mixOmics	Omics Data Integration Project
2017-11-26	RAPTOR	Row and Position Tracheid Organizer
2017-11-26	rfoaas	R Interface to 'FOAAS'
2017-11-26	RNiftyReg	Image Registration Using the 'NiftyReg' Library
2017-11-26	shinyaframe	'WebVR' Data Visualizations with 'RStudio Shiny' and 'Mozilla A-Frame'
2017-11-26	wordnet	WordNet Interface
2017-11-25	bamboo	Protein Secondary Structure Prediction Using the Bamboo Method
2017-11-25	commonsMath	JAR Files of the Apache Commons Mathematics Library
2017-11-25	DescToolsAddIns	Some Functions to be Used as Shortcuts in 'RStudio'
2017-11-25	DLMtool	Data-Limited Methods Toolkit
2017-11-25	dynamichazard	Dynamic Hazard Models using State Space Models
2017-11-25	HelpersMG	Tools for Earth Meteorological Analysis
2017-11-25	jmcm	Joint Mean-Covariance Models using 'Armadillo' and S4
2017-11-25	phenology	Tools to Manage a Parametric Function that Describes Phenology
2017-11-25	scriptexec	Execute Native Scripts
2017-11-25	sparseHessianFD	Numerical Estimation of Sparse Hessians
2017-11-25	tidyxl	Read Untidy Excel Files
2017-11-24	Aoptbdtvc	A-Optimal Block Designs for Comparing Test Treatments with Controls
2017-11-24	cctools	Tools for the Continuous Convolution Trick in Nonparametric Estimation
2017-11-24	dixon	Nearest Neighbour Contingency Table Analysis
2017-11-24	galts	Genetic Algorithms and C-Steps Based LTS (Least Trimmed Squares) Estimation
2017-11-24	GFGM.copula	Generalized Farlie-Gumbel-Morgenstern Copula
2017-11-24	inferference	Methods for Causal Inference with Interference
2017-11-24	LAM	Some Latent Variable Models
2017-11-24	lime	Local Interpretable Model-Agnostic Explanations
2017-11-24	qle	Simulation-Based Quasi-Likelihood Estimation
2017-11-24	replicatedpp2w	Two-Way ANOVA-Like Method to Analyze Replicated Point Patterns
2017-11-24	Rramas	Matrix Population Models
2017-11-24	SNFtool	Similarity Network Fusion
2017-11-24	STARTS	Functions for the STARTS Model
2017-11-24	tgram	Compute and Plot Tracheidograms
2017-11-24	ThresholdROC	Threshold Estimation
2017-11-24	tscount	Analysis of Count Time Series
2017-11-24	unitizer	Interactive R Unit Tests
2017-11-24	vdmR	Visual Data Mining Tools
2017-11-24	venn	Draw Venn Diagrams
2017-11-23	adjustedcranlogs	Remove Automated and Repeated Downloads from 'RStudio' 'CRAN' Download Logs
2017-11-23	BinaryEPPM	Mean and Variance Modeling of Binary Data
2017-11-23	CopulaDTA	Copula Based Bivariate Beta-Binomial Model for Diagnostic Test Accuracy Studies
2017-11-23	CorporaCoCo	Corpora Co-Occurrence Comparison
2017-11-23	d3r	'd3.js' Utilities for R
2017-11-23	distcrete	Discrete Distribution Approximations
2017-11-23	ecospat	Spatial Ecology Miscellaneous Methods
2017-11-23	embryogrowth	Tools to Analyze the Thermal Reaction Norm of Embryo Growth
2017-11-23	forega	Floating-Point Genetic Algorithms with Statistical Forecast Based Inheritance Operator
2017-11-23	iClick	A Button-Based GUI for Financial and Economic Data Analysis
2017-11-23	IDCard	Update Chinese ID Card Number to Eighteen Digits
2017-11-23	joint.Cox	Penalized Likelihood Estimation and Dynamic Prediction under the Joint Frailty-Copula Models Between Tumour Progression and Death for Meta-Analysis
2017-11-23	lawstat	Tools for Biostatistics, Public Policy, and Law
2017-11-23	mgm	Estimating Time-Varying k-Order Mixed Graphical Models
2017-11-23	MHTdiscrete	Multiple Hypotheses Testing for Discrete Data
2017-11-23	mrfDepth	Depth Measures in Multivariate, Regression and Functional Settings
2017-11-23	MVar.pt	Analise multivariada (brazilian portuguese)
2017-11-23	palm	Fitting Point Process Models via the Palm Likelihood
2017-11-23	powdist	Power and Reversal Power Distributions
2017-11-23	RSurvey	Geographic Information System Application
2017-11-23	sn	The Skew-Normal and Related Distributions Such as the Skew-t
2017-11-23	TempleMetrics	Estimating Conditional Distributions
2017-11-23	wtest	The W-Test on Genetic Interactions Testing
2017-11-22	benthos	Marine Benthic Ecosystem Analysis
2017-11-22	blscrapeR	An API Wrapper for the Bureau of Labor Statistics (BLS)
2017-11-22	Directional	Directional Statistics
2017-11-22	dng	Distributions and Gradients
2017-11-22	domino	R Console Bindings for the 'Domino Command-Line Client'
2017-11-22	DVHmetrics	Analyze Dose-Volume Histograms and Check Constraints
2017-11-22	dyads	Dyadic Network Analysis
2017-11-22	fpmoutliers	Frequent Pattern Mining Outliers
2017-11-22	futility	Interim Analysis of Operational Futility in Randomized Trials with Time-to-Event Endpoints and Fixed Follow-Up
2017-11-22	gamRR	Calculate the RR for the GAM
2017-11-22	ggfan	Summarise a Distribution Through Coloured Intervals
2017-11-22	HiCblock	Systematic Analysis of Architectural Proteins and Functional Elements in Blocking Long-Range Contacts Between Loci
2017-11-22	KMgene	Gene-Based Association Analysis for Complex Traits
2017-11-22	LCF	Linear Combination Fitting
2017-11-22	LocalControl	Nonparametric Methods for Generating High Quality Comparative Effectiveness Evidence
2017-11-22	ManifoldOptim	An R Interface to the 'ROPTLIB' Library for Riemannian Manifold Optimization
2017-11-22	mclust	Gaussian Mixture Modelling for Model-Based Clustering, Classification, and Density Estimation
2017-11-22	nricens	NRI for Risk Prediction Models with Time to Event and Binary Response Data
2017-11-22	prioritizr	Systematic Conservation Prioritization in R
2017-11-22	RcppProgress	An Interruptible Progress Bar with OpenMP Support for C++ in R Packages
2017-11-22	RLumModel	Solving Ordinary Differential Equations to Understand Luminescence
2017-11-22	SELF	A Structural Equation Embedded Likelihood Framework for Causal Discovery
2017-11-22	spdep	Spatial Dependence: Weighting Schemes, Statistics and Models
2017-11-22	survClip	Survival Analysis for Pathways
2017-11-21	AMIAS	Alternating Minimization Induced Active Set Algorithms
2017-11-21	anMC	Compute High Dimensional Orthant Probabilities
2017-11-21	bigpca	PCA, Transpose and Multicore Functionality for 'big.matrix' Objects
2017-11-21	bikedata	Download and Aggregate Data from Public Hire Bicycle Systems
2017-11-21	biofiles	An Interface for GenBank/GenPept Flat Files
2017-11-21	CDM	Cognitive Diagnosis Modeling
2017-11-21	epicontacts	Handling, Visualisation and Analysis of Epidemiological Contacts
2017-11-21	ICRanks	Simultaneous Confidence Intervals for Ranks
2017-11-21	multichull	A Generic Convex-Hull-Based Model Selection Method
2017-11-21	ngram	Fast n-Gram 'Tokenization'
2017-11-21	ragt2ridges	Ridge Estimation of Vector Auto-Regressive (VAR) Processes
2017-11-21	RcppHMM	Rcpp Hidden Markov Model
2017-11-21	RcppTN	Rcpp-Based Truncated Normal Distribution RNG and Family
2017-11-21	rgdal	Bindings for the 'Geospatial' Data Abstraction Library
2017-11-21	rockchalk	Regression Estimation and Presentation
2017-11-21	rsed	Stream Editing
2017-11-21	Smisc	Sego Miscellaneous
2017-11-21	sspse	Estimating Hidden Population Size using Respondent Driven Sampling Data
2017-11-21	trialr	Clinical Trial Designs in 'RStan'
2017-11-20	bang	Bayesian Analysis, No Gibbs
2017-11-20	basad	Bayesian Variable Selection with Shrinking and Diffusing Priors
2017-11-20	broom	Convert Statistical Analysis Objects into Tidy Data Frames
2017-11-20	carx	Censored Autoregressive Model with Exogenous Covariates
2017-11-20	CommEcol	Community Ecology Analyses
2017-11-20	copBasic	General Bivariate Copula Theory and Many Utility Functions
2017-11-20	Countr	Flexible Univariate Count Models Based on Renewal Processes
2017-11-20	covafillr	Local Polynomial Regression of State Dependent Covariates in State-Space Models
2017-11-20	evaluator	Information Security Quantified Risk Assessment Toolkit
2017-11-20	fImport	Rmetrics - Importing Economic and Financial Data
2017-11-20	gcdnet	LASSO and Elastic Net (Adaptive) Penalized Least Squares, Logistic Regression, HHSVM, Squared Hinge SVM and Expectile Regression using a Fast GCD Algorithm
2017-11-20	LaF	Fast Access to Large ASCII Files
2017-11-20	ldat	Large Data Sets
2017-11-20	longROC	Time-Dependent Prognostic Accuracy with Multiply Evaluated Bio Markers or Scores
2017-11-20	LPKsample	LP Nonparametric High Dimension K-Sample Comparison
2017-11-20	oompaBase	Class Unions, Matrix Operations, and Color Schemes for OOMPA
2017-11-20	pcr	Analyzing Real-Time Quantitative PCR Data
2017-11-20	PCRedux	Quantitative Polymerase Chain Reaction (qPCR) Machine Learning Helper Tool
2017-11-20	Polychrome	Qualitative Palettes with Many Colors
2017-11-20	pulver	Parallel Ultra-Rapid p-Value Computation for Linear Regression Interaction Terms
2017-11-20	qdap	Bridging the Gap Between Qualitative Data and Quantitative Analysis
2017-11-20	raptr	Representative and Adequate Prioritization Toolkit in R
2017-11-20	siland	Spatial Influence of Landscape
2017-11-20	spatstat.data	Datasets for 'spatstat'
2017-11-20	spatstat.utils	Utility Functions for 'spatstat'
2017-11-20	tm.plugin.factiva	Import Articles from 'Factiva' Using the 'tm' Text Mining Framework
2017-11-19	AWR.Athena	'AWS' Athena 'DBI' Wrapper
2017-11-19	car	Companion to Applied Regression
2017-11-19	EditImputeCont	Simultaneous Edit-Imputation for Continuous Microdata
2017-11-19	FinePop	Fine-Scale Population Analysis
2017-11-19	FlowScreen	Daily Streamflow Trend and Change Point Screening
2017-11-19	InSilicoVA	Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm
2017-11-19	ManlyMix	Manly Mixture Modeling and Model-Based Clustering
2017-11-19	rbcb	R Interface to Brazilian Central Bank Web Services
2017-11-19	RcppClassic	Deprecated 'classic' 'Rcpp' 'API'
2017-11-19	reglogit	Simulation-Based Regularized Logistic Regression
2017-11-19	RLT	Reinforcement Learning Trees
2017-11-19	robustlmm	Robust Linear Mixed Effects Models
2017-11-19	uwIntroStats	Descriptive Statistics, Inference, Regression, and Plotting in an Introductory Statistics Course
2017-11-19	wicket	Utilities to Handle WKT Spatial Data
2017-11-19	wiqid	Quick and Dirty Estimates for Wildlife Populations
2017-11-18	easyAHP	Analytic Hierarchy Process (AHP)
2017-11-18	flowDiv	Cytometric Diversity Indices from Gated Data
2017-11-18	ompr.roi	A Solver for 'ompr' that Uses the R Optimization Infrastructure ('ROI')
2017-11-18	protr	Generating Various Numerical Representation Schemes for Protein Sequences
2017-11-18	RcppHoney	Iterator Based Expression Template Expansion of Standard Operators
2017-11-18	shapes	Statistical Shape Analysis
2017-11-18	sitmo	Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files
2017-11-18	treemapify	Draw Treemaps in 'ggplot2'
2017-11-18	xslt	Extensible Style-Sheet Language Transformations
2017-11-17	ArchaeoChron	Bayesian Modeling of Archaeological Chronologies
2017-11-17	available	Check if the Title of a Package is Available, Appropriate and Interesting
2017-11-17	bnspatial	Spatial Implementation of Bayesian Networks and Mapping
2017-11-17	ensembleMOS	Ensemble Model Output Statistics
2017-11-17	extremefit	Estimation of Extreme Conditional Quantiles and Probabilities
2017-11-17	fAsianOptions	Rmetrics - EBM and Asian Option Valuation
2017-11-17	fBasics	Rmetrics - Markets and Basic Statistics
2017-11-17	fExoticOptions	Rmetrics - Pricing and Evaluating Exotic Option
2017-11-17	fExtremes	Rmetrics - Modelling Extreme Events in Finance
2017-11-17	gamreg	Robust and Sparse Regression via Gamma-Divergence
2017-11-17	ggfittext	Fit Text Inside a Box in 'ggplot2'
2017-11-17	googleCloudStorageR	Interface with Google Cloud Storage API
2017-11-17	imfr	Download Data from the International Monetary Fund's Data API
2017-11-17	KnowBR	Discriminating Well Surveyed Spatial Units from Exhaustive Biodiversity Databases
2017-11-17	logihist	Combined Graphs for Logistic Regression
2017-11-17	mldr.datasets	R Ultimate Multilabel Dataset Repository
2017-11-17	mpmcorrelogram	Multivariate Partial Mantel Correlogram
2017-11-17	nmfem	NMF-EM Algorithm
2017-11-17	ompr	Model and Solve Mixed Integer Linear Programs
2017-11-17	ores	Connector to the Objective Revision Evaluation Service (ORES)
2017-11-17	proPubBills	'ProPublica' U.S. Congress Bills API Wrapper
2017-11-17	protViz	Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
2017-11-17	queuecomputer	Computationally Efficient Queue Simulation
2017-11-17	Relatedness	Maximum Likelihood Estimation of Relatedness using EM Algorithm
2017-11-17	revgeo	Reverse Geocoding with the Photon Geocoder for OpenStreetMap, Google Maps, and Bing
2017-11-17	Rfast	A Collection of Efficient and Extremely Fast R Functions
2017-11-17	Rgretl	Interface to 'gretlcli'
2017-11-17	RHawkes	Renewal Hawkes Process
2017-11-17	rmarkdown	Dynamic Documents for R
2017-11-17	RNeXML	Semantically Rich I/O for the 'NeXML' Format
2017-11-17	sparkavro	Load Avro File into 'Apache Spark'
2017-11-17	spiderbar	Parse and Test Robots Exclusion Protocol Files and Rules
2017-11-17	spotifyr	Pull Track Audio Features from the 'Spotify' Web API
2017-11-17	sppmix	Modeling Spatial Poisson and Related Point Processes
2017-11-17	stringi	Character String Processing Facilities
2017-11-17	timeSeries	Rmetrics - Financial Time Series Objects
2017-11-17	tsBSS	Blind Source Separation and Supervised Dimension Reduction for Time Series
2017-11-17	userfriendlyscience	Quantitative Analysis Made Accessible
2017-11-17	YPInterimTesting	Interim Monitoring Using Adaptively Weighted Log-Rank Test in Clinical Trials
2017-11-16	CIEE	Estimating and Testing Direct Effects in Directed Acyclic Graphs using Estimating Equations
2017-11-16	dequer	Stacks, Queues, and 'Deques' for R
2017-11-16	easyanova	Analysis of Variance and Other Important Complementary Analyses
2017-11-16	epr	Easy Polynomial Regression
2017-11-16	fArma	Rmetrics - Modelling ARMA Time Series Processes
2017-11-16	fAssets	Rmetrics - Analysing and Modelling Financial Assets
2017-11-16	fCopulae	Rmetrics - Bivariate Dependence Structures with Copulae
2017-11-16	fcros	A Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations
2017-11-16	fGarch	Rmetrics - Autoregressive Conditional Heteroskedastic Modelling
2017-11-16	flatr	Transforms Contingency Tables to Data Frames, and Analyses Them
2017-11-16	fMultivar	Rmetrics - Analysing and Modeling Multivariate Financial Return Distributions
2017-11-16	fNonlinear	Rmetrics - Nonlinear and Chaotic Time Series Modelling
2017-11-16	fOptions	Rmetrics - Pricing and Evaluating Basic Options
2017-11-16	fPortfolio	Rmetrics - Portfolio Selection and Optimization
2017-11-16	fUnitRoots	Rmetrics - Modelling Trends and Unit Roots
2017-11-16	googleLanguageR	Call Google's 'Natural Language' API, 'Cloud Translation' API and 'Cloud Speech' API
2017-11-16	hashmap	The Faster Hash Map
2017-11-16	ICSShiny	ICS via a Shiny Application
2017-11-16	JuliaCall	Seamless Integration Between R and 'Julia'
2017-11-16	learnr	Interactive Tutorials for R
2017-11-16	Matrix	Sparse and Dense Matrix Classes and Methods
2017-11-16	MixedPsy	Statistical Tools for the Analysis of Psychophysical Data
2017-11-16	modest	Model-Based Dose-Escalation Trials
2017-11-16	MSGARCH	Markov-Switching GARCH Models
2017-11-16	Myrrix	Interface to Myrrix. Myrrix is a Complete, Real-Time, Scalable Clustering and Recommender System, Evolved from Apache Mahout
2017-11-16	Myrrixjars	R/Myrrix Interface Jars
2017-11-16	padr	Quickly Get Datetime Data Ready for Analysis
2017-11-16	PtProcess	Time Dependent Point Process Modelling
2017-11-16	rtweet	Collecting Twitter Data
2017-11-16	SequentialDesign	Observational Database Study Planning using Exact Sequential Analysis for Poisson and Binomial Data
2017-11-16	TAM	Test Analysis Modules
2017-11-16	taskscheduleR	Schedule R Scripts and Processes with the Windows Task Scheduler
2017-11-16	texmex	Statistical Modelling of Extreme Values
2017-11-16	thregI	Threshold Regression for Interval-Censored Data with a Cure Rate Option
2017-11-16	utility	Construct, Evaluate and Plot Value and Utility Functions
2017-11-16	vennLasso	Variable Selection for Heterogeneous Populations
2017-11-15	arc	Association Rule Classification
2017-11-15	easynls	Easy Nonlinear Model
2017-11-15	enc	Portable Tools for 'UTF-8' Character Data
2017-11-15	EurosarcBayes	Bayesian Single Arm Sample Size Calculation Software
2017-11-15	FateID	Quantification of Fate Bias in Multipotent Progenitors
2017-11-15	fBonds	Rmetrics - Pricing and Evaluating Bonds
2017-11-15	fRegression	Rmetrics - Regression Based Decision and Prediction
2017-11-15	fTrading	Rmetrics - Trading and Rebalancing Financial Instruments
2017-11-15	icensBKL	Accompanion to the Book on Interval Censoring by Bogaerts, Komarek, and Lesaffre
2017-11-15	IQCC	Improved Quality Control Charts
2017-11-15	jmvcore	Dependencies for the 'jamovi' Framework
2017-11-15	laGP	Local Approximate Gaussian Process Regression
2017-11-15	logmult	Log-Multiplicative Models, Including Association Models
2017-11-15	matchMulti	Optimal Multilevel Matching using a Network Algorithm
2017-11-15	meteoland	Landscape Meteorology Tools
2017-11-15	openEBGM	EBGM Scores for Mining Large Contingency Tables
2017-11-15	rFerns	Random Ferns Classifier
2017-11-15	rpicosat	R Bindings for the 'PicoSAT' SAT Solver
2017-11-15	scraEP	Scrape European Parliament Careers
2017-11-15	tactile	New and Extended Plots, Methods, and Panel Functions for 'lattice'
2017-11-15	TOSTER	Two One-Sided Tests (TOST) Equivalence Testing
2017-11-14	bazar	Miscellaneous Basic Functions
2017-11-14	BootValidation	Adjusting for Optimism in 'glmnet' Regression using Bootstrapping
2017-11-14	cdcfluview	Retrieve 'U.S'. Flu Season Data from the 'CDC' 'FluView' Portal
2017-11-14	coop	Co-Operation: Fast Covariance, Correlation, and Cosine Similarity Operations
2017-11-14	dataCompareR	Compare Two Data Frames and Summarise the Difference
2017-11-14	dynsurv	Dynamic Models for Survival Data
2017-11-14	ggpubr	'ggplot2' Based Publication Ready Plots
2017-11-14	googleAuthR	Authenticate and Create Google APIs
2017-11-14	ICCbin	Facilitates Clustered Binary Data Generation, and Estimation of Intracluster Correlation Coefficient (ICC) for Binary Data
2017-11-14	L1pack	Routines for L1 Estimation
2017-11-14	likelihoodExplore	Likelihood Exploration
2017-11-14	ML.MSBD	Maximum Likelihood Inference on Multi-State Trees
2017-11-14	oaqc	Computation of the Orbit-Aware Quad Census
2017-11-14	OptimalTiming	Optimal Timing Identification
2017-11-14	popEpi	Functions for Epidemiological Analysis using Population Data
2017-11-14	PreciseSums	Accurate Floating Point Sums and Products
2017-11-14	rpgm	Fast Simulation of Normal/Exponential Random Variables and Stochastic Differential Equations / Poisson Processes
2017-11-14	subsamp	Subsample Winner Algorithm for Variable Selection in Linear Regression with a Large Number of Variables
2017-11-14	systemicrisk	A Toolbox for Systemic Risk
2017-11-14	tidyposterior	Bayesian Analysis to Compare Models using Resampling Statistics
2017-11-14	tidyverse	Easily Install and Load the 'Tidyverse'
2017-11-14	tribe	Play with the Tribe of Attributes
2017-11-14	variosig	Spatial Dependence Based on Empirical Variograms
2017-11-13	ALEPlot	Accumulated Local Effects (ALE) Plots and Partial Dependence (PD) Plots
2017-11-13	ameco	European Commission Annual Macro-Economic (AMECO) Database
2017-11-13	auctestr	Statistical Testing for AUC Data
2017-11-13	Bergm	Bayesian Exponential Random Graph Models
2017-11-13	bootcluster	Bootstrapping Estimates of Clustering Stability
2017-11-13	cartography	Thematic Cartography
2017-11-13	CHNOSZ	Thermodynamic Calculations for Geobiochemistry
2017-11-13	clubSandwich	Cluster-Robust (Sandwich) Variance Estimators with Small-Sample Corrections
2017-11-13	Dasst	Tools for Reading, Processing and Writing 'DSSAT' Files
2017-11-13	dparser	Port of 'Dparser' Package
2017-11-13	episensr	Basic Sensitivity Analysis of Epidemiological Results
2017-11-13	esc	Effect Size Computation for Meta Analysis
2017-11-13	keyholder	Store Data About Rows
2017-11-13	LSRS	Land Surface Remote Sensing
2017-11-13	MALDIquant	Quantitative Analysis of Mass Spectrometry Data
2017-11-13	multiway	Component Models for Multi-Way Data
2017-11-13	OneArmPhaseTwoStudy	Planning, Conducting, and Analysing Single-Arm Phase II Studies
2017-11-13	osrm	Interface Between R and the OpenStreetMap-Based Routing Service OSRM
2017-11-13	QuantumClone	Clustering Mutations using High Throughput Sequencing (HTS) Data
2017-11-13	raster	Geographic Data Analysis and Modeling
2017-11-13	rethinker	RethinkDB Client
2017-11-13	sentometrics	An Integrated Framework for Textual Sentiment Time Series Aggregation and Prediction
2017-11-13	StakeholderAnalysis	Measuring Stakeholder Influence
2017-11-13	tables	Formula-Driven Table Generation
2017-11-13	tmuxr	Manage 'tmux'
2017-11-13	ToolsForCoDa	Multivariate Tools for Compositional Data Analysis
2017-11-13	utilsIPEA	IPEA Common Functions
2017-11-13	yasp	String Functions for Compact and Expressive Code
2017-11-12	aire.zmvm	Download Mexico City Pollution, Wind, and Temperature Data
2017-11-12	aqp	Algorithms for Quantitative Pedology
2017-11-12	epitab	Flexible Contingency Tables for Epidemiology
2017-11-12	ggplotAssist	'RStudio' Addin for Teaching and Learning 'ggplot2'
2017-11-12	incidence	Compute, Handle, Plot and Model Incidence of Dated Events
2017-11-12	mudata2	Interchange Tools for Multi-Parameter Spatiotemporal Data
2017-11-12	nat	NeuroAnatomy Toolbox for Analysis of 3D Image Data
2017-11-12	openNLPdata	Apache OpenNLP Jars and Basic English Language Models
2017-11-12	phytools	Phylogenetic Tools for Comparative Biology (and Other Things)
2017-11-12	prioritizrdata	Conservation Planning Data Sets
2017-11-12	qboxplot	Quantile-Based Boxplot
2017-11-12	rcbalance	Large, Sparse Optimal Matching with Refined Covariate Balance
2017-11-12	rcbsubset	Optimal Subset Matching with Refined Covariate Balance
2017-11-12	rgbif	Interface to the Global 'Biodiversity' Information Facility API
2017-11-12	RKEAjars	R/KEA Interface Jars
2017-11-12	rsample	General Resampling Infrastructure
2017-11-12	rwalkr	API to Melbourne Pedestrian Data
2017-11-12	SentimentAnalysis	Dictionary-Based Sentiment Analysis
2017-11-12	snnR	Sparse Neural Networks for Genomic Selection in Animal Breeding
2017-11-12	ThankYouStars	Give your Dependencies Stars on GitHub!
2017-11-12	yardstick	Tidy Characterizations of Model Performance
2017-11-12	Zelig	Everyone's Statistical Software
2017-11-11	BatchMap	Software for the Creation of High Density Linkage Maps in Outcrossing Species
2017-11-11	rwunderground	R Interface to Weather Underground API
2017-11-11	sugrrants	Supporting Graphs for Analysing Time Series
2017-11-10	AID	Box-Cox Power Transformation
2017-11-10	airGR	Suite of GR Hydrological Models for Precipitation-Runoff Modelling
2017-11-10	anocva	A Non-Parametric Statistical Test to Compare Clustering Structures
2017-11-10	berryFunctions	Function Collection Related to Plotting and Hydrology
2017-11-10	climwin	Climate Window Analysis
2017-11-10	CoordinateCleaner	Automated Cleaning of Occurrence Records from Biological Collections
2017-11-10	Crossover	Analysis and Search of Crossover Designs
2017-11-10	ctmle	Collaborative Targeted Maximum Likelihood Estimation
2017-11-10	FactoMineR	Multivariate Exploratory Data Analysis and Data Mining
2017-11-10	geojsonio	Convert Data from and to 'GeoJSON' or 'TopoJSON'
2017-11-10	Infusion	Inference Using Simulation
2017-11-10	IsoplotR	Statistical Toolbox for Radiometric Geochronology
2017-11-10	memuse	Memory Estimation Utilities
2017-11-10	mockery	Mocking Library for R
2017-11-10	parSim	Parallel Simulation Studies
2017-11-10	PdPDB	Pattern Discovery in PDB Structures of Metalloproteins
2017-11-10	quokar	Quantile Regression Outlier Diagnostics with K Left Out Analysis
2017-11-10	rGoodData	GoodData API Client Package
2017-11-10	rLDCP	Text Generation from Data
2017-11-10	rODE	Ordinary Differential Equation (ODE) Solvers Written in R Using S4 Classes
2017-11-10	RStoolbox	Tools for Remote Sensing Data Analysis
2017-11-10	sound	A Sound Interface for R
2017-11-10	StAMPP	Statistical Analysis of Mixed Ploidy Populations
2017-11-09	bigtime	Sparse Estimation of Large Time Series Models
2017-11-09	cjoint	AMCE Estimator for Conjoint Experiments
2017-11-09	famSKATRC	Family Sequence Kernel Association Test for Rare and Common Variants
2017-11-09	MOST	Multiphase Optimization Strategy
2017-11-09	nesRdata	National Eutrophication Survey Data
2017-11-09	predkmeans	Covariate Adaptive Clustering
2017-11-09	roccv	ROC for Cross Validation Results
2017-11-09	rWishart	Random Wishart Matrix Generation
2017-11-09	SimMultiCorrData	Simulation of Correlated Data with Multiple Variable Types
2017-11-09	TPD	Methods for Measuring Functional Diversity Based on Trait Probability Density
2017-11-09	wNNSel	Weighted Nearest Neighbor Imputation of Missing Values using Selected Variables
2017-11-08	condusco	Query-Driven Pipeline Execution and Query Templates
2017-11-08	deepboost	Deep Boosting Ensemble Modeling
2017-11-08	FHtest	Tests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class
2017-11-08	geojson	Classes for 'GeoJSON'
2017-11-08	graphon	A Collection of Graphon Estimation Methods
2017-11-08	HIMA	High-Dimensional Mediation Analysis
2017-11-08	intsvy	International Assessment Data Manager
2017-11-08	lintr	A 'Linter' for R Code
2017-11-08	lmomco	L-Moments, Censored L-Moments, Trimmed L-Moments, L-Comoments, and Many Distributions
2017-11-08	lsl	Latent Structure Learning
2017-11-08	MittagLeffleR	The Mittag-Leffler Distribution
2017-11-08	MOLHD	Multiple Objective Latin Hypercube Design
2017-11-08	multcomp	Simultaneous Inference in General Parametric Models
2017-11-08	prophet	Automatic Forecasting Procedure
2017-11-08	RcmdrPlugin.GWRM	R Commander Plug-in for Fitting Generalized Waring Regression Models
2017-11-08	REndo	Fitting Linear Models with Endogenous Regressors using Latent Instrumental Variables
2017-11-08	RQuantLib	R Interface to the 'QuantLib' Library
2017-11-08	seqHMM	Hidden Markov Models for Life Sequences and Other Multivariate, Multichannel Categorical Time Series
2017-11-07	APCanalysis	Analysis of Unreplicated Orthogonal Experiments using All Possible Comparisons
2017-11-07	changepointsHD	Change-Point Estimation for Expensive and High-Dimensional Models
2017-11-07	ClinicalTrialSummary	Summary Measures for Clinical Trials with Survival Outcomes
2017-11-07	covr	Test Coverage for Packages
2017-11-07	EmpiricalCalibration	Routines for Performing Empirical Calibration of Observational Study Estimates
2017-11-07	epxToR	Import 'Epidata' XML Files '.epx'
2017-11-07	ess	Download Data from the European Social Survey on the Fly
2017-11-07	hues	Distinct Colours Palettes Based on 'iwanthue'
2017-11-07	metScanR	Find, Map, and Gather Environmental Data and Metadata
2017-11-07	move	Visualizing and Analyzing Animal Track Data
2017-11-07	pcnetmeta	Patient-Centered Network Meta-Analysis
2017-11-07	plm	Linear Models for Panel Data
2017-11-07	RadOnc	Analytical Tools for Radiation Oncology
2017-11-07	rdryad	Access for Dryad Web Services
2017-11-07	Rsymphony	SYMPHONY in R
2017-11-07	sharpr2	Estimating Regulatory Scores and Identifying HiDRA Data
2017-11-07	SqlRender	Rendering Parameterized SQL and Translation to Dialects
2017-11-07	TFisher	Optimal Thresholding Fisher's P-Value Combination Method
2017-11-07	TreeSearch	Phylogenetic Tree Search Using Custom Optimality Criteria
2017-11-07	UniIsoRegression	Unimodal and Isotonic L1, L2 and Linf Regression
2017-11-07	vardpoor	Variance Estimation for Sample Surveys by the Ultimate Cluster Method
2017-11-06	ABCoptim	Implementation of Artificial Bee Colony (ABC) Optimization
2017-11-06	BMisc	Miscellaneous Functions for Panel Data, Quantiles, and Printing Results
2017-11-06	dcminfo	Information Matrix for Diagnostic Classification Models
2017-11-06	Diderot	Bibliographic Network Analysis
2017-11-06	dslabs	Data Science Labs
2017-11-06	enrichwith	Methods to Enrich R Objects with Extra Components
2017-11-06	genoPlotR	Plot Publication-Grade Gene and Genome Maps
2017-11-06	glmpathcr	Fit a Penalized Continuation Ratio Model for Predicting an Ordinal Response
2017-11-06	goft	Tests of Fit for some Probability Distributions
2017-11-06	googlePublicData	Working with Google's 'Public Data Explorer' DSPL Metadata Files
2017-11-06	hypervolume	High Dimensional Geometry and Set Operations Using Kernel Density Estimation, Support Vector Machines, and Convex Hulls
2017-11-06	nowcasting	Nowcast Analysis and Create Real-Time Data Basis
2017-11-06	OpenMx	Extended Structural Equation Modelling
2017-11-06	pCalibrate	Bayesian Calibrations of P-Values
2017-11-06	RcppQuantuccia	R Bindings to the 'Quantuccia' Header-Only Essentials of 'QuantLib'
2017-11-06	servr	A Simple HTTP Server to Serve Static Files or Dynamic Documents
2017-11-06	splm	Econometric Models for Spatial Panel Data
2017-11-06	tidyselect	Select from a Set of Strings
2017-11-05	approxmatch	Approximately Optimal Fine Balance Matching with Multiple Groups
2017-11-05	ArCo	Artificial Counterfactual Package
2017-11-05	breathteststan	Stan-Based Fit to Gastric Emptying Curves
2017-11-05	cli	Helpers for Developing Command Line Interfaces
2017-11-05	extremeStat	Extreme Value Statistics and Quantile Estimation
2017-11-05	geosphere	Spherical Trigonometry
2017-11-05	gnFit	Goodness of Fit Test for Continuous Distribution Functions
2017-11-05	grex	Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data
2017-11-05	lplyr	'dplyr' Verbs for Lists and Other Verbs for Data Frames
2017-11-05	lsmeans	Least-Squares Means
2017-11-05	nomine	Classify Names by Gender, U.S. Ethnicity, and Leaf Nationality
2017-11-05	pdftools	Text Extraction, Rendering and Converting of PDF Documents
2017-11-05	Pstat	Assessing Pst Statistics
2017-11-05	R.utils	Various Programming Utilities
2017-11-05	statip	Statistical Functions for Probability Distributions
2017-11-05	stylo	Stylometric Analyses
2017-11-05	tableHTML	A Tool to Create HTML Tables
2017-11-04	inaparc	Initialization Algorithms for Partitioning Cluster Analysis
2017-11-04	later	Utilities for Delaying Function Execution
2017-11-04	pinp	'pinp' is not 'PNAS'
2017-11-04	TeXCheckR	Parses LaTeX Documents for Errors
2017-11-03	adfExplorer	Import from and Export to Amiga Disk Files
2017-11-03	AnnuityRIR	Annuity Random Interest Rates
2017-11-03	bioset	Convert a Matrix of Raw Values into Nice and Tidy Data
2017-11-03	blackbox	Black Box Optimization and Exploration of Parameter Space
2017-11-03	clipr	Read and Write from the System Clipboard
2017-11-03	convoSPAT	Convolution-Based Nonstationary Spatial Modeling
2017-11-03	dief	Metrics for Continuous Efficiency
2017-11-03	dynRB	Dynamic Range Boxes
2017-11-03	GMSE	Generalised Management Strategy Evaluation Simulator
2017-11-03	lcyanalysis	Stock Data Analysis Functions
2017-11-03	Metrics	Evaluation Metrics for Machine Learning
2017-11-03	moveVis	Movement Data Visualization
2017-11-03	movMF	Mixtures of von Mises-Fisher Distributions
2017-11-03	mRMRe	Parallelized Minimum Redundancy, Maximum Relevance (mRMR) Ensemble Feature Selection
2017-11-03	patternplot	Versatile Pie Charts, Bar Charts and Box Plots using Patterns, Colors and Images
2017-11-03	PDN	Personalized Disease Network
2017-11-03	pense	Penalized Elastic Net S/MM-Estimator of Regression
2017-11-03	phylopath	Perform Phylogenetic Path Analysis
2017-11-03	pool	Object Pooling
2017-11-03	predatory	Tools for Detecting Predatory Publishers and Journals
2017-11-03	PRIMsrc	PRIM Survival Regression Classification
2017-11-03	PSM	Non-Linear Mixed-Effects Modelling using Stochastic Differential Equations
2017-11-03	rdatacite	'DataCite' Client for 'OAI-PMH' Methods and their Search API
2017-11-03	rdwd	Select and Download Climate Data from 'DWD' (German Weather Service)
2017-11-03	ritis	Integrated Taxonomic Information System Client
2017-11-03	rplos	Interface to the Search 'API' for 'PLoS' Journals
2017-11-03	scoringRules	Scoring Rules for Parametric and Simulated Distribution Forecasts
2017-11-03	SPAtest	Score Test Based on Saddlepoint Approximation
2017-11-03	spatialwarnings	Spatial Early Warning Signals of Ecosystem Degradation
2017-11-03	spew	SPEW Framework for Generating Synthetic Ecosystems
2017-11-03	StepReg	Stepwise Regression Analysis
2017-11-03	topicmodels	Topic Models
2017-11-03	validatetools	Checking and Simplifying Validation Rule Sets
2017-11-03	vmd	Variational Mode Decomposition
2017-11-02	convevol	Analysis of Convergent Evolution
2017-11-02	DatAssim	Data Assimilation
2017-11-02	emojifont	Emoji and Font Awesome in Graphics
2017-11-02	equateIRT	IRT Equating Methods
2017-11-02	equateMultiple	Equating of Multiple Forms
2017-11-02	FFTrees	Generate, Visualise, and Evaluate Fast-and-Frugal Decision Trees
2017-11-02	fsthet	Fst-Heterozygosity Smoothed Quantiles
2017-11-02	hnp	Half-Normal Plots with Simulation Envelopes
2017-11-02	l2boost	Friedman's Boosting Algorithm for Regularized Linear Regression
2017-11-02	mda	Mixture and Flexible Discriminant Analysis
2017-11-02	Mega2R	Accessing and Processing a 'Mega2' Genetic Database
2017-11-02	mobsim	Spatial Simulation and Scale-Dependent Analysis of Biodiversity Changes
2017-11-02	nopp	Nash Optimal Party Positions
2017-11-02	orthoDr	An Orthogonality Constrained Optimization Approach for Semi-Parametric Dimension Reduction Problems
2017-11-02	pglm	Panel Generalized Linear Models
2017-11-02	PReMiuM	Dirichlet Process Bayesian Clustering, Profile Regression
2017-11-02	readobj	Fast Reader for 'Wavefront' OBJ 3D Scene Files
2017-11-02	rhub	Connect to 'R-hub'
2017-11-02	RJSplot	Interactive Graphs with R
2017-11-02	Rpolyhedra	Polyhedra Database
2017-11-02	SLDAssay	Software for Analyzing Limiting Dilution Assays
2017-11-02	slowraker	A Slow Version of the Rapid Automatic Keyword Extraction (RAKE) Algorithm
2017-11-02	solrium	General Purpose R Interface to 'Solr'
2017-11-02	spass	Study Planning and Adaptation of Sample Size
2017-11-02	stilt	Separable Gaussian Process Interpolation (Emulation)
2017-11-02	Taxonstand	Taxonomic Standardization of Plant Species Names
2017-11-02	TBFmultinomial	TBF Methodology Extension for Multinomial Outcomes
2017-11-01	alterryx	An 'API' Client for the 'Alteryx' Gallery
2017-11-01	HiddenMarkov	Hidden Markov Models
2017-11-01	infraFDTD.assist	IO Help for infraFDTD Model
2017-11-01	KraljicMatrix	A Quantified Implementation of the Kraljic Matrix
2017-11-01	mrgsolve	Simulate from ODE-Based Population PK/PD and Systems Pharmacology Models
2017-11-01	multigraph	Plot and Manipulate Multigraphs
2017-11-01	orloca.es	Spanish version of orloca package
2017-11-01	PanJen	A Semi-Parametric Test for Specifying Functional Form
2017-11-01	questionr	Functions to Make Surveys Processing Easier
2017-11-01	Rcrawler	Web Crawler and Scraper
2017-11-01	robustbase	Basic Robust Statistics
2017-11-01	Rsomoclu	Somoclu
2017-11-01	simule	A Constrained L1 Minimization Approach for Estimating Multiple Sparse Gaussian or Nonparanormal Graphical Models
2017-11-01	unittest	TAP-Compliant Unit Testing
2017-10-31	gapminder	Data from Gapminder
2017-10-31	genlogis	Generalized Logistic Distribution
2017-10-31	gfer	Green Finance and Environmental Risk
2017-10-31	haploR	Query 'HaploReg' and 'RegulomeDB'
2017-10-31	lpme	Nonparametric Estimation of Measurement Error Models
2017-10-31	mclustcomp	Measures for Comparing Clusters
2017-10-31	metricTester	Test Metric and Null Model Statistical Performance
2017-10-31	nodiv	Compares the Distribution of Sister Clades Through a Phylogeny
2017-10-31	QNB	Differential RNA Methylation Analysis for Count-Based Small-Sample Sequencing Data with a Quad-Negative Binomial Model
2017-10-31	rcdk	Interface to the 'CDK' Libraries
2017-10-31	rgeos	Interface to Geometry Engine - Open Source ('GEOS')
2017-10-31	SHELF	Tools to Support the Sheffield Elicitation Framework
2017-10-31	textstem	Tools for Stemming and Lemmatizing Text
2017-10-31	wec	Weighted Effect Coding
2017-10-30	abe	Augmented Backward Elimination
2017-10-30	ape	Analyses of Phylogenetics and Evolution
2017-10-30	bbmle	Tools for General Maximum Likelihood Estimation
2017-10-30	coala	A Framework for Coalescent Simulation
2017-10-30	conover.test	Conover-Iman Test of Multiple Comparisons Using Rank Sums
2017-10-30	dbhydroR	'DBHYDRO' Hydrologic and Water Quality Data
2017-10-30	dodgr	Distances on Directed Graphs
2017-10-30	dynfrail	Fitting Dynamic Frailty Models with the EM Algorithm
2017-10-30	flan	FLuctuation ANalysis on Mutation Models
2017-10-30	JMbayes	Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach
2017-10-30	MBHdesign	Spatial Designs for Ecological and Environmental Surveys
2017-10-30	n1qn1	Port of the 'Scilab' 'n1qn1' Module for Unconstrained BFGS Optimization
2017-10-30	phylocanvas	Interactive Phylogenetic Trees Using the 'Phylocanvas' JavaScript Library
2017-10-30	R2admb	'ADMB' to R Interface Functions
2017-10-30	Rduino	A Microcontroller Interface
2017-10-30	reportROC	An Easy Way to Report ROC Analysis
2017-10-30	roadoi	Find Free Versions of Scholarly Publications via the oaDOI Service
2017-10-30	rsurfer	Manipulating 'Freesurfer' Generated Data
2017-10-30	safer	Encrypt and Decrypt Strings, R Objects and Files
2017-10-30	shadowtext	Shadow Text Grob and Layer
2017-10-29	CAISEr	Comparison of Algorithms with Iterative Sample Size Estimation
2017-10-29	clickR	Fix Data and Create Report Tables from Different Objects
2017-10-29	diffusr	Network Diffusion Algorithms
2017-10-29	episode	Estimation with Penalisation in Systems of Ordinary Differential Equations
2017-10-29	FSA	Simple Fisheries Stock Assessment Methods
2017-10-29	glue	Interpreted String Literals
2017-10-29	gridSVG	Export 'grid' Graphics as SVG
2017-10-29	HMMoce	Improved Analysis of Marine Animal Movement Data Using Hidden Markov Models
2017-10-29	lazyeval	Lazy (Non-Standard) Evaluation
2017-10-29	linl	'linl' is not 'Letter'
2017-10-29	mBvs	Bayesian Variable Selection Methods for Multivariate Data
2017-10-29	rgen	Random Sampling Distribution C++ Routines for Armadillo
2017-10-29	rpg	Easy Interface to Advanced PostgreSQL Features
2017-10-29	spgwr	Geographically Weighted Regression
2017-10-29	SurrogateTest	Early Testing for a Treatment Effect using Surrogate Marker Information
2017-10-29	tidystats	Create a Tidy Statistics Output File
2017-10-29	websearchr	Access Domains and Search Popular Websites
2017-10-28	coppeCosenzaR	COPPE-Cosenza Fuzzy Hierarchy Model
2017-10-28	Evapotranspiration	Modelling Actual, Potential and Reference Crop Evapotranspiration
2017-10-28	inlmisc	Miscellaneous Functions for the USGS INL Project Office
2017-10-28	mctest	Multicollinearity Diagnostic Measures
2017-10-28	nets	Network Estimation for Time Series
2017-10-28	PieceExpIntensity	Bayesian Model to Find Changepoints Based on Rates and Count Data
2017-10-28	RZigZag	Zig-Zag Sampler
2017-10-28	sinew	Create 'roxygen2' Skeleton with Information from Function Script
2017-10-27	AbSim	Time Resolved Simulations of Antibody Repertoires
2017-10-27	data.table	Extension of 'data.frame'
2017-10-27	distdrawr	Download Occurrence Data of Vascular Plants in Germany from the FLORKART Database
2017-10-27	dunn.test	Dunn's Test of Multiple Comparisons Using Rank Sums
2017-10-27	pixels	Tools for Working with Image Pixels
2017-10-27	Power2Stage	Power and Sample-Size Distribution of 2-Stage Bioequivalence Studies
2017-10-27	rcreds	Securely Use Credentials Within R Scripts
2017-10-27	snpReady	Preparing Genotypic Datasets in Order to Run Genomic Analysis
2017-10-27	swagger	Dynamically Generates Documentation from a 'Swagger' Compliant API
2017-10-27	vfcp	Computation of v Values for U and Copula C(U, v)
2017-10-26	BIFIEsurvey	Tools for Survey Statistics in Educational Assessment
2017-10-26	BTLLasso	Modelling Heterogeneity in Paired Comparison Data
2017-10-26	catnet	Categorical Bayesian Network Inference
2017-10-26	census	Scrape US Census Data
2017-10-26	countyfloods	Quantify United States County-Level Flood Measurements
2017-10-26	di	Deficit Index (DI)
2017-10-26	epitools	Epidemiology Tools
2017-10-26	fiery	A Lightweight and Flexible Web Framework
2017-10-26	FinAna	Financial Analysis and Regression Diagnostic Analysis
2017-10-26	kaphom	Test the Homogeneity of Kappa Statistics
2017-10-26	meanr	Sentiment Analysis Scorer
2017-10-26	modifiedmk	Modified Mann Kendall Trend Tests
2017-10-26	nyctaxi	Accessing New York City Taxi Data
2017-10-26	oro.nifti	Rigorous - NIfTI + ANALYZE + AFNI : Input / Output
2017-10-26	routr	A Simple Router for HTTP and WebSocket Requests
2017-10-26	SCMA	Single-Case Meta-Analysis
2017-10-26	SpATS	Spatial Analysis of Field Trials with Splines
2017-10-26	surveyplanning	Survey Planning Tools
2017-10-25	actogrammr	Read in Activity Data and Plot Actograms
2017-10-25	asus	Adaptive SURE Thresholding Using Side Information
2017-10-25	camtrapR	Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses
2017-10-25	GerminaR	Germination Indexes for Seed Germination Variables for Ecophysiological Studies
2017-10-25	gmeta	Meta-Analysis via a Unified Framework of Confidence Distribution
2017-10-25	hdf5r	Interface to the 'HDF5' Binary Data Format
2017-10-25	IDmining	Intrinsic Dimension for Data Mining
2017-10-25	MEPDF	Multivariate Empirical Density Function
2017-10-25	multitaper	Spectral Analysis Tools using the Multitaper Method
2017-10-25	netdiffuseR	Analysis of Diffusion and Contagion Processes on Networks
2017-10-25	OPI	Open Perimetry Interface
2017-10-25	reqres	Powerful Classes for HTTP Requests and Responses
2017-10-25	Runuran	R Interface to the UNU.RAN Random Variate Generators
2017-10-25	unfoldr	Stereological Unfolding for Spheroidal Particles
2017-10-25	WaveletArima	Wavelet ARIMA Model
2017-10-25	WWR	Weighted Win Loss Statistics and their Variances
2017-10-24	autoimage	Multiple Heat Maps for Projected Coordinates
2017-10-24	bigKRLS	Optimized Kernel Regularized Least Squares
2017-10-24	BIS	Programmatic Access to Bank for International Settlements Data
2017-10-24	cbar	Contextual Bayesian Anomaly Detection in R
2017-10-24	checkmate	Fast and Versatile Argument Checks
2017-10-24	comtradr	Interface with the United Nations Comtrade API
2017-10-24	densityClust	Clustering by Fast Search and Find of Density Peaks
2017-10-24	dfpk	Bayesian Dose-Finding Designs using Pharmacokinetics (PK) for Phase I Clinical Trials
2017-10-24	fbar	An Extensible Approach to Flux Balance Analysis
2017-10-24	glm2	Fitting Generalized Linear Models
2017-10-24	jsTree	Create Interactive Trees with the 'jQuery' 'jsTree' Plugin
2017-10-24	lexiconPT	Lexicons for Portuguese Text Analysis
2017-10-24	mice	Multivariate Imputation by Chained Equations
2017-10-24	MOEADr	Component-Wise MOEA/D Implementation
2017-10-24	MoLE	Modeling Language Evolution
2017-10-24	nspmix	Nonparametric and Semiparametric Mixture Estimation
2017-10-24	OOBCurve	Out of Bag Learning Curve
2017-10-24	optimization	Flexible Optimization of Complex Loss Functions with State and Parameter Space Constraints
2017-10-24	orloca	Operations Research LOCational Analysis Models
2017-10-24	paramtest	Run a Function Iteratively While Varying Parameters
2017-10-24	Rlibeemd	Ensemble Empirical Mode Decomposition (EEMD) and Its Complete Variant (CEEMDAN)
2017-10-24	rsm	Response-Surface Analysis
2017-10-24	sads	Maximum Likelihood Models for Species Abundance Distributions
2017-10-24	spTDyn	Spatially Varying and Spatio-Temporal Dynamic Linear Models
2017-10-24	subrank	Computes Copula using Ranks and Subsampling
2017-10-24	SubTite	Subgroup Specific Optimal Dose Assignment
2017-10-24	XR	A Structure for Interfaces from R
2017-10-24	XRPython	Structured Interface to 'Python'
2017-10-24	zebu	Local Association Measures
2017-10-23	AzureML	Interface with Azure Machine Learning Datasets, Experiments and Web Services
2017-10-23	bayesPop	Probabilistic Population Projection
2017-10-23	BBMV	Models for Continuous Traits Evolving in Macroevolutionary Landscapes of any Shape
2017-10-23	bigQueryR	Interface with Google BigQuery with Shiny Compatibility
2017-10-23	carfima	Continuous-Time Fractionally Integrated ARMA Process for Irregularly Spaced Long-Memory Time Series Data
2017-10-23	COMBIA	Synergy/Antagonism Analyses of Drug Combinations
2017-10-23	DBEST	Detecting Breakpoints and Estimating Segments in Trend
2017-10-23	EfficientMaxEigenpair	Efficient Initials for Computing the Maximal Eigenpair
2017-10-23	KGode	Kernel Based Gradient Matching for Parameter Inference in Ordinary Differential Equations
2017-10-23	lsei	Solving Least Squares or Quadratic Programming Problems under Equality/Inequality Constraints
2017-10-23	mem	The Moving Epidemic Method
2017-10-23	MHCtools	Analysis of MHC Data in Non-Model Species
2017-10-23	MlBayesOpt	Hyper Parameter Tuning for Machine Learning, Using Bayesian Optimization
2017-10-23	mpath	Regularized Linear Models
2017-10-23	orcutt	Estimate Procedure in Case of First Order Autocorrelation
2017-10-23	PCAmixdata	Multivariate Analysis of Mixed Data
2017-10-23	Publish	Format Output of Various Routines in a Suitable Way for Reports and Publication
2017-10-23	rgenoud	R Version of GENetic Optimization Using Derivatives
2017-10-23	ROI.plugin.deoptim	'DEoptim' and 'DEoptimR' Plugin for the 'R' Optimization Interface
2017-10-23	WaveLetLongMemory	Estimating Long Memory Parameter using Wavelet
2017-10-23	zFactor	Calculate the Compressibility Factor 'z' for Hydrocarbon Gases
2017-10-22	BAS	Bayesian Variable Selection and Model Averaging using Bayesian Adaptive Sampling
2017-10-22	cytometree	Automated Cytometry Gating and Annotation
2017-10-22	debugme	Debug R Packages
2017-10-22	docuSignr	Connect to 'DocuSign' API
2017-10-22	dr4pl	Dose Response Data Analysis using the 4 Parameter Logistic (4PL) Model
2017-10-22	GetITRData	Reading Financial Reports from Bovespa's ITR System
2017-10-22	groupdata2	Creating Groups from Data
2017-10-22	growthrates	Estimate Growth Rates from Experimental Data
2017-10-22	modcmfitr	Fit a Modified Connor-Mosimann Distribution to Elicited Quantiles in Multinomial Problems
2017-10-22	oii	Crosstab and Statistical Tests for OII MSc Stats Course
2017-10-22	PCA4you	PCA Plotting in a User Friendly Way
2017-10-22	ROI.plugin.alabama	'alabama' Plug-in for the 'R' Optimization Infrastructure
2017-10-22	ROI.plugin.ecos	'ECOS' Plugin for the 'R' Optimization Infrastructure
2017-10-22	ROI.plugin.msbinlp	'Multi-Solution' Binary Linear Problem Plug-in for the 'R' Optimization Interface
2017-10-22	ROI.plugin.nloptr	'nloptr' Plug-in for the 'R' Optimization Infrastructure
2017-10-22	ROI.plugin.optimx	'optimx' Plug-in for the 'R' Optimization Infrastructure
2017-10-22	ROI.plugin.scs	'SCS' Plug-in for the 'R' Optimization Infrastructure
2017-10-22	sankey	Illustrate the Flow of Information or Material
2017-10-22	simecol	Simulation of Ecological (and Other) Dynamic Systems
2017-10-22	subprocess	Manage Sub-Processes in R
2017-10-21	auk	eBird Data Extraction and Processing with AWK
2017-10-21	CANSIM2R	Directly Extracts Complete CANSIM Data Tables
2017-10-21	giphyr	R Interface to the Giphy API
2017-10-21	gmapsdistance	Distance and Travel Time Between Two Points from Google Maps
2017-10-21	hogsvdR	Higher-Order Generalized Singular Value Decomposition
2017-10-21	paleotree	Paleontological and Phylogenetic Analyses of Evolution
2017-10-21	RcmdrPlugin.survival	R Commander Plug-in for the 'survival' Package
2017-10-21	securitytxt	Identify and Parse Web Security Policies Files
2017-10-21	skyscapeR	Skyscape Archaeology Data Reduction, Visualization and Analysis
2017-10-20	accrual	Bayesian Accrual Prediction
2017-10-20	datafsm	Estimating Finite State Machine Models from Data
2017-10-20	doFuture	A Universal Foreach Parallel Adaptor using the Future API of the 'future' Package
2017-10-20	DOvalidation	Kernel Hazard Estimation with Best One-Sided and Double One-Sided Cross-Validation
2017-10-20	EHR	Electronic Health Record (EHR) Data Processing and Analysis Tool
2017-10-20	genomic.autocorr	Models Dealing with Spatial Dependency in Genomic Data
2017-10-20	hNMF	Hierarchical Non-Negative Matrix Factorization
2017-10-20	ISLR	Data for an Introduction to Statistical Learning with Applications in R
2017-10-20	Kpart	Cubic Spline Fitting with Knot Selection
2017-10-20	liteq	Lightweight Portable Message Queue Using 'SQLite'
2017-10-20	miLineage	Association Tests for Microbial Lineages on a Taxonomic Tree
2017-10-20	mortAAR	Analysis of Archaeological Mortality Data
2017-10-20	mvMonitoring	Multi-State Adaptive Dynamic Principal Component Analysis for Multivariate Process Monitoring
2017-10-20	NMOF	Numerical Methods and Optimization in Finance
2017-10-20	nmw	Understanding Nonlinear Mixed Effects Modeling for Population Pharmacokinetics
2017-10-20	OnAge	Test of Between-Group Differences in the Onset of Senescence
2017-10-20	ordinalForest	Ordinal Forests: Prediction and Variable Ranking with Ordinal Target Variables
2017-10-20	ROI.plugin.cplex	ROI Plug-in CPLEX
2017-10-20	ROI.plugin.glpk	'ROI' Plug-in 'GLPK'
2017-10-20	rospca	Robust Sparse PCA using the ROSPCA Algorithm
2017-10-20	ShortForm	Automatic Short Form Creation
2017-10-20	smapr	Acquisition and Processing of NASA Soil Moisture Active-Passive (SMAP) Data
2017-10-20	webchem	Chemical Information from the Web
2017-10-20	whoami	Username, Full Name, Email Address, 'GitHub' Username of the Current User
2017-10-20	XRJulia	Structured Interface to 'Julia'
2017-10-19	bdots	Bootstrapped Differences of Time Series
2017-10-19	CausalGAM	Estimation of Causal Effects with Generalized Additive Models
2017-10-19	ChainLadder	Statistical Methods and Models for Claims Reserving in General Insurance
2017-10-19	condformat	Conditional Formatting in Data Frames
2017-10-19	EasyMx	Easy Model-Builder Functions for 'OpenMx'
2017-10-19	EpiContactTrace	Epidemiological Tool for Contact Tracing
2017-10-19	Gmisc	Descriptive Statistics, Transition Plots, and More
2017-10-19	gtrendsR	Perform and Display Google Trends Queries
2017-10-19	gwrpvr	Genome-Wide Regression P-Value (Gwrpv)
2017-10-19	htm2txt	Convert Html into Text
2017-10-19	mafs	Multiple Automatic Forecast Selection
2017-10-19	monoreg	Bayesian Monotonic Regression Using a Marked Point Process Construction
2017-10-19	multimode	Mode Testing and Exploring
2017-10-19	nlcv	Nested Loop Cross Validation
2017-10-19	rabi	Generate Codes to Uniquely and Robustly Identify Individuals for Animal Behavior Studies
2017-10-19	rex	Friendly Regular Expressions
2017-10-19	rslurm	Submit R Calculations to a Slurm Cluster
2017-10-19	spTimer	Spatio-Temporal Bayesian Modelling
2017-10-18	areaplot	Plot Stacked Areas and Confidence Bands as Filled Polygons
2017-10-18	BayesRS	Bayes Factors for Hierarchical Linear Models with Continuous Predictors
2017-10-18	ctsem	Continuous Time Structural Equation Modelling
2017-10-18	divo	Tools for Analysis of Diversity and Similarity in Biological Systems
2017-10-18	FlowRegEnvCost	The Environmental Costs of Flow Regulation
2017-10-18	geoRglm	A Package for Generalised Linear Spatial Models
2017-10-18	gpuR	GPU Functions for R Objects
2017-10-18	GreedySBTM	Greedy Stochastic Block Transition Models
2017-10-18	Haplin	Analyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes
2017-10-18	HHG	Heller-Heller-Gorfine Tests of Independence and Equality of Distributions
2017-10-18	HSAR	Hierarchical Spatial Autoregressive Model
2017-10-18	LZeroSpikeInference	Exact Spike Train Inference via L0 Optimization
2017-10-18	mathpix	Support for the 'Mathpix' API (Image to 'LaTeX')
2017-10-18	NNMIS	Nearest Neighbor Based Multiple Imputation for Survival Data with Missing Covariates
2017-10-18	onemap	Construction of Genetic Maps in Experimental Crosses: Full-Sib, RILs, F2 and Backcrosses
2017-10-18	purrr	Functional Programming Tools
2017-10-18	rarhsmm	Regularized Autoregressive Hidden Semi Markov Model
2017-10-18	RonFHIR	Read and Search Interface to the 'HL7 FHIR' REST API
2017-10-18	satellite	Handling and Manipulating Remote Sensing Data
2017-10-18	SimInf	A Framework for Data-Driven Stochastic Disease Spread Simulations
2017-10-18	swa	Subsampling Winner Algorithm for Classification
2017-10-18	tempR	Temporal Sensory Data Analysis
2017-10-17	clustMixType	k-Prototypes Clustering for Mixed Variable-Type Data
2017-10-17	crosswalkr	Rename and Encode Data Frames Using External Crosswalk Files
2017-10-17	data360r	Wrapper for TC/Govdata360 API
2017-10-17	dbstats	Distance-Based Statistics
2017-10-17	geomedb	Fetch 'GeOMe-db' FIMS Data
2017-10-17	geoops	'GeoJSON' Topology Calculations and Operations
2017-10-17	httpcache	Query Cache for HTTP Clients
2017-10-17	ivmodel	Statistical Inference and Sensitivity Analysis for Instrumental Variables Model
2017-10-17	knockoff	The Knockoff Filter for Controlled Variable Selection
2017-10-17	mregions	Marine Regions Data from 'Marineregions.org'
2017-10-17	OpenML	Open Machine Learning and Open Data Platform
2017-10-17	randomForestSRC	Random Forests for Survival, Regression, and Classification (RF-SRC)
2017-10-17	reddPrec	Reconstruction of Daily Data - Precipitation
2017-10-17	RegularizedSCA	Regularized Simultaneous Component Based Data Integration
2017-10-17	sicegar	Analysis of Single-Cell Viral Growth Curves
2017-10-17	snht	Standard Normal Homogeneity Test
2017-10-17	vennplot	Venn Diagrams in 2D and 3D
2017-10-16	BiG	Bayesian Aggregation in Genomic Applications
2017-10-16	bWGR	Bayesian Whole-Genome Regression
2017-10-16	copulaData	Data Sets for Copula Modeling
2017-10-16	corrplot	Visualization of a Correlation Matrix
2017-10-16	fishmethods	Fishery Science Methods and Models in R
2017-10-16	forestinventory	Design-Based Global and Small-Area Estimations for Multiphase Forest Inventories
2017-10-16	GSMX	Multivariate Genomic Selection
2017-10-16	gsynth	Generalized Synthetic Control Method
2017-10-16	LMest	Latent Markov Models with and without Covariates
2017-10-16	metacart	Meta-CART: A Flexible Approach to Identify Moderators in Meta-Analysis
2017-10-16	metaheuristicOpt	Metaheuristic for Optimization
2017-10-16	mvdalab	Multivariate Data Analysis Laboratory
2017-10-16	rmsfuns	Quickly View Data Frames in 'Excel', Build Folder Paths and Create Date Vectors
2017-10-16	sarima	Simulation and Prediction with Seasonal ARIMA Models
2017-10-16	SelvarMix	Regularization for Variable Selection in Model-Based Clustering and Discriminant Analysis
2017-10-16	SILGGM	Statistical Inference of Large-Scale Gaussian Graphical Model in Gene Networks
2017-10-16	sperrorest	Perform Spatial Error Estimation and Variable Importance in Parallel
2017-10-16	TSclust	Time Series Clustering Utilities
2017-10-16	uGMAR	Estimate Univariate Gaussian or Student's t Mixture Autoregressive Model
2017-10-16	VarSelLCM	Variable Selection for Model-Based Clustering of Continuous, Count, Categorical or Mixed-Type Data Set with Missing Values
2017-10-15	lagged	Classes and Methods for Lagged Objects
2017-10-15	pdfetch	Fetch Economic and Financial Time Series Data from Public Sources
2017-10-15	Plasmode	'Plasmode' Simulation
2017-10-15	regnet	Network-Based Regularization for Generalized Linear Models
2017-10-15	RSentiment	Analyse Sentiment of English Sentences
2017-10-15	RViennaCL	'ViennaCL' C++ Header Files
2017-10-15	water	Actual Evapotranspiration with Energy Balance Models
2017-10-14	asht	Applied Statistical Hypothesis Tests
2017-10-14	AssocTests	Genetic Association Studies
2017-10-14	bayesLife	Bayesian Projection of Life Expectancy
2017-10-14	collectArgs	Quickly and Neatly Collect Arguments from One Environment to Pass to Another
2017-10-14	covequal	Test for Equality of Covariance Matrices
2017-10-14	exifr	EXIF Image Data in R
2017-10-14	lawn	Client for 'Turfjs' for 'Geospatial' Analysis
2017-10-14	npsurv	Nonparametric Survival Analysis
2017-10-14	oshka	Recursive Quoted Language Expansion
2017-10-14	otvPlots	Over Time Variable Plots
2017-10-14	ProTrackR	Manipulate and Play 'ProTracker' Modules
2017-10-14	RcmdrPlugin.UCA	UCA Rcmdr Plug-in
2017-10-14	SEMID	Identifiability of Linear Structural Equation Models
2017-10-14	slickR	Create Interactive Carousels with the JavaScript 'Slick' Library
2017-10-14	welchADF	Welch-James Statistic for Robust Hypothesis Testing under Heterocedasticity and Non-Normality
2017-10-13	bedr	Genomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix'
2017-10-13	breathtestcore	Core Functions to Read and Fit 13c Time Series from Breath Tests
2017-10-13	ChoR	Chordalysis R Package
2017-10-13	dave	Functions for "Data Analysis in Vegetation Ecology"
2017-10-13	desplot	Plotting Field Plans for Agricultural Experiments
2017-10-13	LMfilteR	Filter Methods for Parameter Estimation in Linear Regression Models
2017-10-13	PLmixed	Estimate (Generalized) Linear Mixed Models with Factor Structures
2017-10-13	queueing	Analysis of Queueing Networks and Models
2017-10-13	rucrdtw	R Bindings for the UCR Suite
2017-10-13	RxODE	Facilities for Simulating from ODE-Based Models
2017-10-12	BETS	Brazilian Economic Time Series
2017-10-12	brainR	Helper Functions to 'misc3d' and 'rgl' Packages for Brain Imaging
2017-10-12	curstatCI	Confidence Intervals for the Current Status Model
2017-10-12	icd	Tools for Working with ICD-9 and ICD-10 Codes, and Finding Comorbidities
2017-10-12	icmm	Empirical Bayes Variable Selection via ICM/M Algorithm
2017-10-12	iDINGO	Integrative Differential Network Analysis in Genomics
2017-10-12	incgraph	Incremental Graphlet Counting for Network Optimisation
2017-10-12	opencpu	Producing and Reproducing Results
2017-10-12	poplite	Tools for Simplifying the Population and Querying of SQLite Databases
2017-10-12	PubMedWordcloud	'Pubmed' Word Clouds
2017-10-12	rJava	Low-Level R to Java Interface
2017-10-11	AmyloGram	Prediction of Amyloid Proteins
2017-10-11	condvis	Conditional Visualization for Statistical Models
2017-10-11	dblr	Discrete Boosting Logistic Regression
2017-10-11	HybridFS	A Hybrid Filter-Wrapper Feature Selection Method
2017-10-11	kirby21.base	Example Data from the Multi-Modal MRI 'Reproducibility' Resource
2017-10-11	mnreadR	MNREAD Parameters Estimation and Curve Plotting
2017-10-11	rgrass7	Interface Between GRASS 7 Geographical Information System and R
2017-10-11	rollmatch	Rolling Entry Matching
2017-10-11	rscopus	Scopus Database 'API' Interface
2017-10-11	rvertnet	Search 'Vertnet', a 'Database' of Vertebrate Specimen Records
2017-10-11	SDMPlay	Species Distribution Modelling Playground
2017-10-11	SIMMS	Subnetwork Integration for Multi-Modal Signatures
2017-10-11	survidm	Inference and Prediction in an Illness-Death Model
2017-10-11	temperatureresponse	Temperature Response
2017-10-11	triversity	Diversity Measures on Tripartite Graphs
2017-10-11	XKCDdata	Get XKCD Comic Data
2017-10-11	xSub	Cross-National Data on Sub-National Violence
2017-10-10	acs	Download, Manipulate, and Present American Community Survey and Decennial Data from the US Census
2017-10-10	bookdownplus	Generate Varied Types of Books and Documents with R 'bookdown' Package
2017-10-10	CCTpack	Consensus Analysis, Model-Based Clustering, and Cultural Consensus Theory Applications
2017-10-10	colt	Command-Line Color Themes
2017-10-10	explor	Interactive Interfaces for Results Exploration
2017-10-10	freesurfer	Wrapper Functions for 'Freesurfer'
2017-10-10	GUTS	Fast Calculation of the Likelihood of a Stochastic Survival Model
2017-10-10	hisse	Hidden State Speciation and Extinction
2017-10-10	Kernelheaping	Kernel Density Estimation for Heaped and Rounded Data
2017-10-10	mapfuser	Construct Consensus Genetic Maps and Estimate Recombination Rates
2017-10-10	MCI	Multiplicative Competitive Interaction (MCI) Model
2017-10-10	meltt	Matching Event Data by Location, Time and Type
2017-10-10	pscl	Political Science Computational Laboratory
2017-10-10	PTE	Personalized Treatment Evaluator
2017-10-10	rakeR	Easy Spatial Microsimulation (Raking) in R
2017-10-10	RatingScaleReduction	Rating Scale Reduction Procedure
2017-10-10	rWind	Download, Edit and Include Wind Data in Ecological and Evolutionary Analysis
2017-10-10	sys	Portable System Utilities
2017-10-09	brea	Bayesian Recurrent Event Analysis
2017-10-09	CatPredi	Optimal Categorisation of Continuous Variables in Prediction Models
2017-10-09	colf	Constrained Optimization on Linear Function
2017-10-09	colourvision	Colour Vision Models
2017-10-09	ctmcd	Estimating the Parameters of a Continuous-Time Markov Chain from Discrete-Time Data
2017-10-09	EffectStars	Visualization of Categorical Response Models
2017-10-09	EnvStats	Package for Environmental Statistics, Including US EPA Guidance
2017-10-09	hansard	Provides Easy Downloading Capabilities for the UK Parliament API
2017-10-09	mada	Meta-Analysis of Diagnostic Accuracy
2017-10-09	QGglmm	Estimate Quantitative Genetics Parameters from Generalised Linear Mixed Models
2017-10-09	rcarbon	Calibration and Analysis of Radiocarbon Dates
2017-10-09	RcppBlaze	'Rcpp' Integration for the 'Blaze' High-Performance C++ Math Library
2017-10-09	Replicate	Statistical Metrics for Multisite Replication Studies
2017-10-09	survivALL	Continuous Biomarker Assessment by Exhaustive Survival Analysis
2017-10-08	anominate	Alpha-NOMINATE Ideal Point Estimator
2017-10-08	BMhyb	Hybrid Trait Evolution under Brownian Motion
2017-10-08	gcKrig	Analysis of Geostatistical Count Data using Gaussian Copulas
2017-10-08	mozzie	Weekly Notified Dengue Cases in Sri Lanka
2017-10-08	rerf	Randomer Forest
2017-10-08	RNetCDF	Interface to NetCDF Datasets
2017-10-08	simcausal	Simulating Longitudinal Data with Causal Inference Applications
2017-10-08	trustOptim	Trust Region Optimization for Nonlinear Functions with Sparse Hessians
2017-10-08	vagalumeR	Access to the 'Vagalume' API
2017-10-07	D3partitionR	Interactive Charts of Nested and Hierarchical Data with 'D3.js'
2017-10-07	editData	'RStudio' Addin for Editing a 'data.frame'
2017-10-07	GROAN	Genomic Regression Workbench
2017-10-07	pmhtutorial	Minimal Working Examples for Particle Metropolis-Hastings
2017-10-07	RPEnsemble	Random Projection Ensemble Classification
2017-10-07	SQUAREM	Squared Extrapolation Methods for Accelerating EM-Like Monotone Algorithms
2017-10-06	BaTFLED3D	Bayesian Tensor Factorization Linked to External Data
2017-10-06	Blaunet	Calculate and Analyze Blau Status for (Covert) Organizations
2017-10-06	BLRPM	Stochastic Rainfall Generator Bartlett-Lewis Rectangular Pulse Model
2017-10-06	BrownDog	Brown Dog R Interface
2017-10-06	dcmodify	Modify Data Using Externally Defined Modification Rules
2017-10-06	DWLasso	Degree Weighted Lasso
2017-10-06	frailtypack	General Frailty Models: Shared, Joint and Nested Frailty Models with Prediction
2017-10-06	gemlog	File Conversion for 'Gem Infrasound Logger'
2017-10-06	genridge	Generalized Ridge Trace Plots for Ridge Regression
2017-10-06	GSCAD	Implementing GSCAD Method for Image Denoising and Inpainting
2017-10-06	hyperSpec	Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...)
2017-10-06	IIS	Datasets to Accompany Wolfe and Schneider - Intuitive Introductory Statistics
2017-10-06	kdecopula	Kernel Smoothing for Bivariate Copula Densities
2017-10-06	MareyMap	Estimation of Meiotic Recombination Rates Using Marey Maps
2017-10-06	oro.pet	Rigorous - Positron Emission Tomography
2017-10-06	PResiduals	Probability-Scale Residuals and Residual Correlations
2017-10-06	rLakeAnalyzer	Lake Physics Tools
2017-10-06	shelltrace	Bivalve Growth and Trace Element Accumulation Model
2017-10-06	SnakeCharmR	R and Python Integration
2017-10-06	SSDforR	Functions to Analyze Single System Data
2017-10-06	tensorBSS	Blind Source Separation Methods for Tensor-Valued Observations
2017-10-05	clifro	Easily Download and Visualise Climate Data from CliFlo
2017-10-05	DataEntry	Make it Easier to Enter Questionnaire Data
2017-10-05	diffMeanVar	Detecting Gene Probes with Different Means or Variances Between Two Groups
2017-10-05	EWGoF	Goodness-of-Fit Tests for the Exponential and Two-Parameter Weibull Distributions
2017-10-05	GBJ	Generalized Berk-Jones Test for Set-Based Inference in Genetic Association Studies
2017-10-05	gbutils	Simulation of Real and Complex Numbers and Small Programming Utilities
2017-10-05	gghighlight	Highlight Lines and Points in 'ggplot2'
2017-10-05	INCATome	Internal Control Analysis of Translatome Studies by Microarrays
2017-10-05	latexpdf	Convert Tables to PDF or PNG
2017-10-05	matchbook	Wrapper for the 'Matchbook' API
2017-10-05	MCMCglmm	MCMC Generalised Linear Mixed Models
2017-10-05	OutbreakTools	Basic Tools for the Analysis of Disease Outbreaks
2017-10-05	RelimpPCR	Relative Importance PCA Regression
2017-10-05	relsurv	Relative Survival
2017-10-05	spc	Statistical Process Control – Collection of Some Useful Functions
2017-10-04	birtr	The R Package for "The Basics of Item Response Theory Using R"
2017-10-04	FactoInvestigate	Automatic Description of Factorial Analysis
2017-10-04	hamlet	Hierarchical Optimal Matching and Machine Learning Toolbox
2017-10-04	highlight	Syntax Highlighter
2017-10-04	IDF	Estimation and Plotting of IDF Curves
2017-10-04	infuser	A Very Basic Templating Engine
2017-10-04	kader	Kernel Adaptive Density Estimation and Regression
2017-10-04	lagsarlmtree	Spatial Lag Model Trees
2017-10-04	polmineR	Toolkit for Corpus Analysis
2017-10-04	proustr	Tools for Natural Language Processing in French
2017-10-04	recombinator	Recombinate Nested Lists to Dataframes
2017-10-04	rma.exact	Exact Confidence Intervals for Random Effects Meta-Analyses
2017-10-04	Rssa	A Collection of Methods for Singular Spectrum Analysis
2017-10-04	selectiveInference	Tools for Post-Selection Inference
2017-10-04	SixSigma	Six Sigma Tools for Quality Control and Improvement
2017-10-04	smpic	Creates Images Sized for Social Media
2017-10-04	spduration	Split-Population Duration (Cure) Regression
2017-10-04	Sunclarco	Survival Analysis using Copulas
2017-10-03	confinterpret	Descriptive Interpretations of Confidence Intervals
2017-10-03	ecd	Elliptic Lambda Distribution and Option Pricing Model
2017-10-03	fedreporter	Interface to Federal 'RePORTER' API
2017-10-03	InvariantCausalPrediction	Invariant Causal Prediction
2017-10-03	RProtoBuf	R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3)
2017-10-03	splot	Split Plot
2017-10-03	tidyboot	Tidyverse-Compatible Bootstrapping
2017-10-03	transport	Optimal Transport in Various Forms
2017-10-02	additiveDEA	Additive Data Envelopment Analysis Models
2017-10-02	ConSpline	Partial Linear Least-Squares Regression using Constrained Splines
2017-10-02	DoubleCone	Test Against Parametric Regression Function
2017-10-02	EnergyOnlineCPM	Distribution Free Multivariate Control Chart Based on Energy Test
2017-10-02	exactci	Exact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases
2017-10-02	GenomicMating	Efficient Breeding by Genomic Mating
2017-10-02	ggallin	Grab Bag of 'ggplot2' Functions
2017-10-02	gphmm	Generalized Pair Hidden Markov Chain Model for Sequence Alignment
2017-10-02	nzelect	New Zealand Election Data
2017-10-02	pavo	Perceptual Analysis, Visualization and Organization of Spectral Color Data in R
2017-10-02	pivottabler	Create Pivot Tables in R
2017-10-02	polyCub	Cubature over Polygonal Domains
2017-10-02	RSwissMaps	Plot and Save Customised Swiss Maps
2017-10-02	rzmq	R Bindings for 'ZeroMQ'
2017-10-02	shallot	Random Partition Distribution Indexed by Pairwise Information
2017-10-02	SigTree	Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree
2017-10-02	SPYvsSPY	Spy vs. Spy Data
2017-10-02	tangram	The Grammar of Tables
2017-10-02	triangle	Provides the Standard Distribution Functions for the Triangle Distribution
2017-10-02	TSCS	Time Series Cointegrated System
2017-10-01	childsds	Data and Methods Around Reference Values in Pediatrics
2017-10-01	convexjlr	Disciplined Convex Programming in R using 'Convex.jl'
2017-10-01	msaR	Multiple Sequence Alignment for R Shiny
2017-10-01	PWEALL	Design and Monitoring of Survival Trials Accounting for Complex Situations
2017-10-01	realestateDK	A Wrapper for the API of the Danish Housing Market Statistics
2017-10-01	teamcolors	Color Palettes for Pro Sports Teams
2017-09-30	basictabler	Construct Rich Tables for Output to 'HTML'/'Excel'
2017-09-30	DSAIDE	Dynamical Systems Approach to Infectious Disease Epidemiology
2017-09-30	ggsci	Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2'
2017-09-30	ini	Read and Write '.ini' Files
2017-09-30	msu	Multivariate Symmetric Uncertainty and Other Measurements
2017-09-30	SimTimeVar	Simulate Longitudinal Dataset with Time-Varying Correlated Covariates
2017-09-30	statsDK	A Wrapper for the API of Statistics Denmark
2017-09-29	apercu	Quick Look at your Data
2017-09-29	CHMM	Coupled Hidden Markov Models
2017-09-29	ggrepel	Repulsive Text and Label Geoms for 'ggplot2'
2017-09-29	hdnom	Benchmarking and Visualization Toolkit for Penalized Cox Models
2017-09-29	htmltidy	Tidy Up and Test XPath Queries on HTML and XML Content
2017-09-29	MANOVA.RM	Analysis of Multivariate Data and Repeated Measures Designs
2017-09-29	MFKnockoffs	Model-Free Knockoff Filter for Controlled Variable Selection
2017-09-29	mmpp	Various Similarity and Distance Metrics for Marked Point Processes
2017-09-29	pairwise	Rasch Model Parameters by Pairwise Algorithm
2017-09-29	paleofire	Analysis of Charcoal Records from the Global Charcoal Database
2017-09-29	RCPmod	Regions of Common Profiles Modelling with Mixtures-of-Experts
2017-09-29	rdrop2	Programmatic Interface to the 'Dropbox' API
2017-09-29	simr	Power Analysis for Generalised Linear Mixed Models by Simulation
2017-09-29	vcdExtra	'vcd' Extensions and Additions
2017-09-28	ArchaeoPhases	Post-Processing of the Markov Chain Simulated by 'ChronoModel', 'Oxcal' or 'BCal'
2017-09-28	breakfast	Multiple Change-Point Detection and Segmentation
2017-09-28	catcont	Test for and Identify Categorical or Continuous Values
2017-09-28	chopthin	The Chopthin Resampler
2017-09-28	clusterSEs	Calculate Cluster-Robust p-Values and Confidence Intervals
2017-09-28	dataRetrieval	Retrieval Functions for USGS and EPA Hydrologic and Water Quality Data
2017-09-28	DoE.MIParray	Creation of Arrays by Mixed Integer Programming
2017-09-28	doParallel	Foreach Parallel Adaptor for the 'parallel' Package
2017-09-28	dplyr	A Grammar of Data Manipulation
2017-09-28	electoral	Allocating Seats Methods and Party System Scores
2017-09-28	enaR	Tools for Ecological Network Analysis
2017-09-28	gesca	Generalized Structured Component Analysis (GSCA)
2017-09-28	glacierSMBM	Glacier Surface Mass Balance Model
2017-09-28	isnullptr	Check if an 'externalptr' is a Null Pointer
2017-09-28	jqr	Client for 'jq', a 'JSON' Processor
2017-09-28	Momocs	Morphometrics using R
2017-09-28	pder	Panel Data Econometrics with R
2017-09-28	pifpaf	Potential Impact Fraction and Population Attributable Fraction for Cross-Sectional Data
2017-09-28	projector	Project Dense Vectors Representation of Texts on a 2D Plan
2017-09-28	qGaussian	The q-Gaussian Distribution
2017-09-28	quickReg	Build Regression Models Quickly and Display the Results Using 'ggplot2'
2017-09-28	repfdr	Replicability Analysis for Multiple Studies of High Dimension
2017-09-27	APfun	Geo-Processing Helper Functions
2017-09-27	colourpicker	A Colour Picker Tool for Shiny and for Selecting Colours in Plots
2017-09-27	ecoseries	An R Interface to Brazilian Central Bank and Sidra APIs and the IPEA Data
2017-09-27	enpls	Ensemble Partial Least Squares Regression
2017-09-27	epitable	Create HTML Tables in the Style Used in Epidemiological Papers
2017-09-27	etl	Extract-Transform-Load Framework for Medium Data
2017-09-27	EventStudy	Event Study Analysis
2017-09-27	hybridModels	Stochastic Hybrid Models in Dynamic Networks
2017-09-27	importar	Enables Importing/Loading of Packages or Functions While Creating an Alias for Them
2017-09-27	ISOcodes	Selected ISO Codes
2017-09-27	kfda	Kernel Fisher Discriminant Analysis
2017-09-27	LFDREmpiricalBayes	Estimating Local False Discovery Rates Using Empirical Bayes Methods
2017-09-27	MNP	R Package for Fitting the Multinomial Probit Model
2017-09-27	MSbox	Mass Spectrometry Tools
2017-09-27	RcppZiggurat	'Rcpp' Integration of Different "Ziggurat" Normal RNG Implementations
2017-09-27	regplot	Enhanced Regression Nomogram Plot
2017-09-27	sampSurf	Sampling Surface Simulation for Areal Sampling Methods
2017-09-27	surrosurv	Evaluation of Failure Time Surrogate Endpoints in Individual Patient Data Meta-Analyses
2017-09-27	tau	Text Analysis Utilities
2017-09-27	taxize	Taxonomic Information from Around the Web
2017-09-27	tinyProject	A Lightweight Template for Data Analysis Projects
2017-09-27	vetr	Trust, but Verify
2017-09-26	bayesAB	Fast Bayesian Methods for AB Testing
2017-09-26	BNPMIXcluster	Bayesian Nonparametric Model for Clustering with Mixed Scale Variables
2017-09-26	coinmarketcapr	Get Cryptocurrencies Market Cap Prices from Coin Market Cap
2017-09-26	ggraptR	Allows Interactive Visualization of Data Through a Web Browser GUI
2017-09-26	kmi	Kaplan-Meier Multiple Imputation for the Analysis of Cumulative Incidence Functions in the Competing Risks Setting
2017-09-26	RcppAnnoy	'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest Neighbors
2017-09-26	rsurface	Design of Rotatable Central Composite Experiments and Response Surface Analysis
2017-09-25	Cprob	The Conditional Probability Function of a Competing Event
2017-09-25	d3plus	Seamless 'D3Plus' Integration
2017-09-25	econullnetr	Null Model Analysis for Ecological Networks
2017-09-25	forecast	Forecasting Functions for Time Series and Linear Models
2017-09-25	MPSEM	Modeling Phylogenetic Signals using Eigenvector Maps
2017-09-25	MTA	Multiscalar Territorial Analysis
2017-09-25	prioritylasso	Analyzing Multiple Omics Data with an Offset Approach
2017-09-25	PSTR	Panel Smooth Transition Regression Modelling
2017-09-25	RDML	Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files
2017-09-25	Rpdb	Read, Write, Visualize and Manipulate PDB Files
2017-09-25	svd	Interfaces to Various State-of-Art SVD and Eigensolvers
2017-09-25	TreeSimGM	Simulating Phylogenetic Trees under General Bellman Harris and Lineage Shift Model
2017-09-25	wrswoR.benchmark	Benchmark and Correctness Data for Weighted Random Sampling Without Replacement
2017-09-25	wsrf	Weighted Subspace Random Forest for Classification
2017-09-24	ICBayes	Bayesian Semiparametric Models for Interval-Censored Data
2017-09-24	JGR	Java GUI for R
2017-09-24	MatrixCorrelation	Matrix Correlation Coefficients
2017-09-24	RcppGSL	'Rcpp' Integration for 'GNU GSL' Vectors and Matrices
2017-09-24	scam	Shape Constrained Additive Models
2017-09-24	smoothSurv	Survival Regression with Smoothed Error Distribution
2017-09-24	spacetime	Classes and Methods for Spatio-Temporal Data
2017-09-23	apex	Phylogenetic Methods for Multiple Gene Data
2017-09-23	collapsibleTree	Interactive Collapsible Tree Diagrams using 'D3.js'
2017-09-23	exams	Automatic Generation of Exams in R
2017-09-23	parlitools	Tools for Analysing UK Politics
2017-09-23	sensitivity	Global Sensitivity Analysis of Model Outputs
2017-09-23	sparseFLMM	Functional Linear Mixed Models for Irregularly or Sparsely Sampled Data
2017-09-23	wikipediatrend	Public Subject Attention via Wikipedia Page View Statistics
2017-09-22	AdaptFitOS	Adaptive Semiparametric Regression with Simultaneous Confidence Bands
2017-09-22	anomalyDetection	Implementation of Augmented Network Log Anomaly Detection Procedures
2017-09-22	DescriptiveStats.OBeu	Descriptive Statistics OpenBudgets.eu
2017-09-22	glmnet	Lasso and Elastic-Net Regularized Generalized Linear Models
2017-09-22	GPPFourier	Calculate Gross Primary Production (GPP) from O2 Time Series
2017-09-22	leabRa	The Artificial Neural Networks Algorithm Leabra
2017-09-22	mosaicModel	An Interface to Statistical Modeling Independent of Model Architecture
2017-09-22	MRFA	Fitting and Predicting Large-Scale Nonlinear Regression Problems using Multi-Resolution Functional ANOVA (MRFA) Approach
2017-09-22	OBMbpkg	Estimate the Population Size for the Mb Capture-Recapture Model
2017-09-22	qrcmNP	Nonlinear and Penalized Quantile Regression Coefficients Modeling
2017-09-22	rase	Range Ancestral State Estimation for Phylogeography and Comparative Analyses
2017-09-22	RcmdrPlugin.sutteForecastR	'Rcmdr' Plugin for Alpha-Sutte Indicator 'sutteForecastR'
2017-09-22	regexSelect	Regular Expressions in 'shiny' Select Lists
2017-09-22	rprev	Estimating Disease Prevalence from Registry Data
2017-09-22	traits	Species Trait Data from Around the Web
2017-09-22	USCF	Elo Rating of a USCF Member
2017-09-22	WikidataR	API Client Library for 'Wikidata'
2017-09-21	AbsFilterGSEA	Improved False Positive Control of Gene-Permuting GSEA with Absolute Filtering
2017-09-21	alakazam	Immunoglobulin Clonal Lineage and Diversity Analysis
2017-09-21	augSIMEX	Analysis of Data with Mixed Measurement Error and Misclassification in Covariates
2017-09-21	brazilmaps	Brazilian Maps from Different Geographic Levels
2017-09-21	formula.tools	Programmatic Utilities for Manipulating Formulas, Expressions, Calls, Assignments and Other R Objects
2017-09-21	genBaRcode	Analysis and Visualization Tools for Genetic Barcode Data
2017-09-21	magicLamp	'WeMo Switch' Smart Plug Utilities
2017-09-21	metRology	Support for Metrological Applications
2017-09-21	QLearning	Reinforcement Learning using the Q Learning Algorithm
2017-09-21	rstansim	Simulation Studies with Stan
2017-09-21	softermax	Read Exported Data from 'SoftMax Pro'
2017-09-21	SSLASSO	The Spike-and-Slab LASSO
2017-09-21	tigger	R Tools for Inferring New Immunoglobulin Alleles from Rep-Seq Data
2017-09-20	BradleyTerry2	Bradley-Terry Models
2017-09-20	cptec	An Interface to the 'CPTEC/INPE' API
2017-09-20	darksky	Tools to Work with the 'Dark Sky' 'API'
2017-09-20	ensemblepp	Ensemble Postprocessing Data Sets
2017-09-20	FDRSeg	FDR-Control in Multiscale Change-Point Segmentation
2017-09-20	fergm	Estimation and Fit Assessment of Frailty Exponential Random Graph Models
2017-09-20	InterpretMSSpectrum	Interpreting High Resolution Mass Spectra
2017-09-20	molaR	Dental Surface Complexity Measurement Tools
2017-09-20	NSM3	Functions and Datasets to Accompany Hollander, Wolfe, and Chicken - Nonparametric Statistical Methods, Third Edition
2017-09-20	prettymapr	Scale Bar, North Arrow, and Pretty Margins in R
2017-09-20	ROI.plugin.clp	'Clp (Coin-or linear programming)' Plugin for the 'R' Optimization Interface
2017-09-20	rstpm2	Generalized Survival Models
2017-09-20	rwc	Random Walk Covariance Models
2017-09-20	SOIL	Sparsity Oriented Importance Learning
2017-09-20	Tides	Quasi-Periodic Time Series Characteristics
2017-09-20	trelliscope	Create and Navigate Large Multi-Panel Visual Displays
2017-09-19	binaryGP	Fit and Predict a Gaussian Process Model with (Time-Series) Binary Response
2017-09-19	BMT	The BMT Distribution
2017-09-19	candisc	Visualizing Generalized Canonical Discriminant and Canonical Correlation Analysis
2017-09-19	CluMix	Clustering and Visualization of Mixed-Type Data
2017-09-19	COCONUT	COmbat CO-Normalization Using conTrols (COCONUT)
2017-09-19	coneproj	Primal or Dual Cone Projections with Routines for Constrained Regression
2017-09-19	curvecomp	Multiple Curve Comparisons Using Parametric Bootstrap
2017-09-19	envDocument	Document the R Working Environment
2017-09-19	EQUIVNONINF	Testing for Equivalence and Noninferiority
2017-09-19	fusionclust	Clustering and Feature Screening using L1 Fusion Penalty
2017-09-19	gma	Granger Mediation Analysis
2017-09-19	IGP	Interchangeable Gaussian Process Models
2017-09-19	kpeaks	Determination of K Using Peak Counts of Features for Clustering
2017-09-19	lgtdl	A Set of Methods for Longitudinal Data Objects
2017-09-19	magicaxis	Pretty Scientific Plotting with Minor-Tick and Log Minor-Tick Support
2017-09-19	MALDIrppa	MALDI Mass Spectrometry Data Robust Pre-Processing and Analysis
2017-09-19	manet	Multiple Allocation Model for Actor-Event Networks
2017-09-19	predtoolsTS	Time Series Prediction
2017-09-19	QuantTools	Enhanced Quantitative Trading Modelling
2017-09-19	qvcalc	Quasi Variances for Factor Effects in Statistical Models
2017-09-19	rsparkling	R Interface for H2O Sparkling Water
2017-09-19	SiER	Signal Extraction Approach for Sparse Multivariate Response Regression
2017-09-19	speaq	Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment, Peak Based Processing, Quantitative Analysis and Visualizations
2017-09-19	stochvol	Efficient Bayesian Inference for Stochastic Volatility (SV) Models
2017-09-19	sure	Surrogate Residuals for Ordinal and General Regression Models
2017-09-19	Unicode	Unicode Data and Utilities
2017-09-18	BNSL	Bayesian Network Structure Learning
2017-09-18	egcm	Engle-Granger Cointegration Models
2017-09-18	leafSTAR	Silhouette to Area Ratio of Tilted Surfaces
2017-09-18	mcMST	A Toolbox for the Multi-Criteria Minimum Spanning Tree Problem
2017-09-18	mvLSW	Multivariate, Locally Stationary Wavelet Process Estimation
2017-09-18	prefmod	Utilities to Fit Paired Comparison Models for Preferences
2017-09-18	recmap	Compute the Rectangular Statistical Cartogram
2017-09-18	scaleboot	Approximately Unbiased P-Values via Multiscale Bootstrap
2017-09-18	tsgui	Gui for Simulating Time Series
2017-09-17	cytominer	Methods for Image-Based Cell Profiling
2017-09-17	ggpmisc	Miscellaneous Extensions to 'ggplot2'
2017-09-17	randnet	Random Network Model Selection and Parameter Tuning
2017-09-17	rbtt	Alternative Bootstrap-Based t-Test Aiming to Reduce Type-I Error for Non-Negative, Zero-Inflated Data
2017-09-17	SampleSize4ClinicalTrials	Sample Size Calculation for Mean and Proportion Comparisons in Phase 3 Clinical Trials
2017-09-17	vegclust	Fuzzy Clustering of Vegetation Data
2017-09-16	crayon	Colored Terminal Output
2017-09-16	DES	Discrete Event Simulation
2017-09-16	EthSEQ	Ethnicity Annotation from Whole Exome Sequencing Data
2017-09-16	forestplot	Advanced Forest Plot Using 'grid' Graphics
2017-09-16	gensphere	Generalized Spherical Distributions
2017-09-16	googleComputeEngineR	R Interface with Google Compute Engine
2017-09-16	lambda.r	Modeling Data with Functional Programming
2017-09-16	MsdeParEst	Parametric Estimation in Mixed-Effects Stochastic Differential Equations
2017-09-16	mvmesh	Multivariate Meshes and Histograms in Arbitrary Dimensions
2017-09-16	PKI	Public Key Infrastucture for R Based on the X.509 Standard
2017-09-16	SphericalCubature	Numerical Integration over Spheres and Balls in n-Dimensions; Multivariate Polar Coordinates
2017-09-16	wildcard	Templates for Data Frames
2017-09-15	ASIP	Automated Satellite Image Processing
2017-09-15	AurieLSHGaussian	Creates a Neighbourhood Using Locality Sensitive Hashing for Gaussian Projections
2017-09-15	CATTexact	Computation of the p-Value for the Exact Conditional Cochran-Armitage Trend Test
2017-09-15	DoE.wrapper	Wrapper Package for Design of Experiments Functionality
2017-09-15	effects	Effect Displays for Linear, Generalized Linear, and Other Models
2017-09-15	fastcox	Lasso and Elastic-Net Penalized Cox's Regression in High Dimensions Models using the Cocktail Algorithm
2017-09-15	ggjoy	Joyplots in 'ggplot2'
2017-09-15	gglasso	Group Lasso Penalized Learning Using a Unified BMD Algorithm
2017-09-15	ggridges	Ridgeline Plots in 'ggplot2'
2017-09-15	Gmedian	Geometric Median, k-Median Clustering and Robust Median PCA
2017-09-15	gradientPickerD3	Interactive Color Gradient Picker Using 'htmlwidgets' and the Modified JS Script 'jquery-gradient-picker'
2017-09-15	heemod	Markov Models for Health Economic Evaluations
2017-09-15	heplots	Visualizing Hypothesis Tests in Multivariate Linear Models
2017-09-15	linemap	Line Maps
2017-09-15	liureg	Liu Regression with Liu Biasing Parameters and Statistics
2017-09-15	medflex	Flexible Mediation Analysis Using Natural Effect Models
2017-09-15	MFT	The Multiple Filter Test for Change Point Detection
2017-09-15	SCORPIUS	Inferring Developmental Chronologies from Single-Cell RNA Sequencing Data
2017-09-15	sitar	Super Imposition by Translation and Rotation Growth Curve Analysis
2017-09-15	spmoran	Moran's Eigenvector-Based Spatial Regression Models
2017-09-15	veccompare	Perform Set Operations on Vectors, Automatically Generating All n-Wise Comparisons, and Create Markdown Output
2017-09-14	adiv	Analysis of Diversity
2017-09-14	adwave	Wavelet Analysis of Genomic Data from Admixed Populations
2017-09-14	alineR	Alignment of Phonetic Sequences Using the 'ALINE' Algorithm
2017-09-14	ASMap	Linkage Map Construction using the MSTmap Algorithm
2017-09-14	bizdays	Business Days Calculations and Utilities
2017-09-14	CausalImpact	Inferring Causal Effects using Bayesian Structural Time-Series Models
2017-09-14	causalMGM	Causal Learning of Mixed Graphical Models
2017-09-14	elastic	General Purpose Interface to 'Elasticsearch'
2017-09-14	energy	E-Statistics: Multivariate Inference via the Energy of Data
2017-09-14	eVenn	A Powerful Tool to Quickly Compare Huge Lists and Draw Venn Diagrams
2017-09-14	glassdoor	Interface to 'Glassdoor' API
2017-09-14	MAMS	Designing Multi-Arm Multi-Stage Studies
2017-09-14	mmand	Mathematical Morphology in Any Number of Dimensions
2017-09-14	nprobust	Nonparametric Robust Estimation and Inference Methods using Local Polynomial Regression and Kernel Density Estimation
2017-09-14	perccalc	Estimate Percentiles from an Ordered Categorical Variable
2017-09-14	plsgenomics	PLS Analyses for Genomics
2017-09-14	RNifti	Fast R and C++ Access to NIfTI Images
2017-09-14	RSA	Response Surface Analysis
2017-09-14	smoothAPC	Smoothing of Two-Dimensional Demographic Data, Optionally Taking into Account Period and Cohort Effects
2017-09-14	TR8	A Tool for Downloading Functional Traits Data for Plant Species
2017-09-13	adlift	An Adaptive Lifting Scheme Algorithm
2017-09-13	ADPF	Use Least Squares Polynomial Regression and Statistical Testing to Improve Savitzky-Golay
2017-09-13	aroma.core	Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework
2017-09-13	asdreader	Reading ASD Binary Files in R
2017-09-12	agricolae	Statistical Procedures for Agricultural Research
2017-09-12	auto.pca	Automatic Variable Reduction Using Principal Component Analysis
2017-09-12	bayesplot	Plotting for Bayesian Models
2017-09-12	BSSasymp	Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing Matrix Estimates
2017-09-12	DCD	Differential Community Detection in Paired Biological Networks
2017-09-12	dosresmeta	Multivariate Dose-Response Meta-Analysis
2017-09-12	egg	Extensions for 'ggplot2', to Align Plots, and Set Panel Sizes
2017-09-12	fICA	Classical, Reloaded and Adaptive FastICA Algorithms
2017-09-12	FractalParameterEstimation	Simulation and Parameter Estimation of Randomized Sierpinski Carpets using the p-p-p-q-Model
2017-09-12	gains	Lift (Gains) Tables and Charts
2017-09-12	intccr	Semiparametric Competing Risks Regression under Interval Censoring
2017-09-12	medmod	Simple Mediation and Moderation Analysis
2017-09-12	PredPsych	Predictive Approaches in Psychology
2017-09-12	pubmed.mineR	Text Mining of PubMed Abstracts
2017-09-12	qtlbook	Datasets for the R/qtl Book
2017-09-12	sparsebn	Learning Sparse Bayesian Networks from High-Dimensional Data
2017-09-12	SpatialNP	Multivariate Nonparametric Methods Based on Spatial Signs and Ranks
2017-09-12	tergm	Fit, Simulate and Diagnose Models for Network Evolution Based on Exponential-Family Random Graph Models
2017-09-12	unifDAG	Uniform Sampling of Directed Acyclic Graphs
2017-09-12	womblR	Spatiotemporal Boundary Detection Model for Areal Unit Data
2017-09-11	BayesCR	Bayesian Analysis of Censored Regression Models Under Scale Mixture of Skew Normal Distributions
2017-09-11	blocksdesign	Nested and Crossed Block Designs for Factorial, Fractional Factorial and Unstructured Treatment Sets
2017-09-11	bmp	Read Windows Bitmap (BMP) Images
2017-09-11	ccdrAlgorithm	CCDr Algorithm for Learning Sparse Gaussian Bayesian Networks
2017-09-11	clhs	Conditioned Latin Hypercube Sampling
2017-09-11	compareDF	Do a Git Style Diff of the Rows Between Two Dataframes with Similar Structure
2017-09-11	future.BatchJobs	A Future API for Parallel and Distributed Processing using BatchJobs
2017-09-11	future.batchtools	A Future API for Parallel and Distributed Processing using 'batchtools'
2017-09-11	GauPro	Gaussian Process Fitting
2017-09-11	gmt	Interface Between GMT Map-Making Software and R
2017-09-11	liftLRD	Wavelet Lifting Estimators of the Hurst Exponent for Regularly and Irregularly Sampled Time Series
2017-09-11	ltm	Latent Trait Models under IRT
2017-09-11	mvna	Nelson-Aalen Estimator of the Cumulative Hazard in Multistate Models
2017-09-11	nos	Compute Node Overlap and Segregation in Ecological Networks
2017-09-11	opendotaR	Interface for OpenDota API
2017-09-11	powerlmm	Power Calculations for Longitudinal Multilevel Models
2017-09-11	serial	The Serial Interface Package
2017-09-11	showtextdb	Font Files for the 'showtext' Package
2017-09-11	sutteForecastR	Forecasting Data using Alpha-Sutte Indicator
2017-09-11	svglite	An 'SVG' Graphics Device
2017-09-11	TideCurves	Analysis and Prediction of Tides
2017-09-11	TideTables	Tide Analysis and Prediction of Predominantly Semi-Diurnal Tides
2017-09-11	yuimaGUI	A Graphical User Interface for the 'yuima' Package
2017-09-10	discretecdAlgorithm	Coordinate-Descent Algorithm for Learning Sparse Discrete Bayesian Networks
2017-09-10	MTSYS	Methods in Mahalanobis-Taguchi (MT) System
2017-09-10	SNSequate	Standard and Nonstandard Statistical Models and Methods for Test Equating
2017-09-09	arulesViz	Visualizing Association Rules and Frequent Itemsets
2017-09-09	CARS	Covariate Assisted Ranking and Screening for Large-Scale Two-Sample Inference
2017-09-09	cwhmisc	Miscellaneous Functions for Math, Plotting, Printing, Statistics, Strings, and Tools
2017-09-09	fecR	Fishing Effort Calculator in R
2017-09-09	GeoMongo	Geospatial Queries Using 'PyMongo'
2017-09-09	gridExtra	Miscellaneous Functions for "Grid" Graphics
2017-09-09	jointDiag	Joint Approximate Diagonalization of a Set of Square Matrices
2017-09-09	keyring	Access the System Credential Store from R
2017-09-09	metaforest	Exploring Heterogeneity in Meta-Analysis using Random Forests
2017-09-09	psych	Procedures for Psychological, Psychometric, and Personality Research
2017-09-09	RcppRedis	'Rcpp' Bindings for 'Redis' using the 'hiredis' Library
2017-09-09	RTaxometrics	Taxometric Analysis
2017-09-09	sparsebnUtils	Utilities for Learning Sparse Bayesian Networks
2017-09-08	AdapSamp	Adaptive Sampling Algorithms
2017-09-08	BiDAG	Bayesian Inference for Directed Acyclic Graphs (BiDAG)
2017-09-08	corehunter	Multi-Purpose Core Subset Selection
2017-09-08	DAC	Calculating Data Agreement Criterion Scores to Rank Experts Based on Their Beliefs
2017-09-08	distrr	Estimate and Manage Empirical Distributions
2017-09-08	dMod	Dynamic Modeling and Parameter Estimation in ODE Models
2017-09-08	fdANOVA	Analysis of Variance for Univariate and Multivariate Functional Data
2017-09-08	ForestTools	Analyzing Remotely Sensed Forest Data
2017-09-08	graphkernels	Graph Kernels
2017-09-08	openintro	Data Sets and Supplemental Functions from 'OpenIntro' Textbooks
2017-09-08	PhylogeneticEM	Automatic Shift Detection using a Phylogenetic EM
2017-09-08	repurrrsive	Examples of Recursive Lists and Nested or Split Data Frames
2017-09-08	RSiena	Siena - Simulation Investigation for Empirical Network Analysis
2017-09-08	SMM	Simulation and Estimation of Multi-State Discrete-Time Semi-Markov and Markov Models
2017-09-08	textshape	Tools for Reshaping Text
2017-09-08	varbvs	Large-Scale Bayesian Variable Selection Using Variational Methods
2017-09-07	AWR	'AWS' Java 'SDK' for R
2017-09-07	backShift	Learning Causal Cyclic Graphs from Unknown Shift Interventions
2017-09-07	BayLum	Chronological Bayesian Models Integrating Optically Stimulated Luminescence and Radiocarbon Age Dating
2017-09-07	Bios2cor	From Biological Sequences and Simulations to Correlation Analysis
2017-09-07	cOde	Automated C Code Generation for 'deSolve', 'bvpSolve' and 'Sundials'
2017-09-07	cprr	Functions for Working with Danish CPR Numbers
2017-09-07	ebimetagenomics	EBI Metagenomics Portal
2017-09-07	glmnetcr	Fit a Penalized Constrained Continuation Ratio Model for Predicting an Ordinal Response
2017-09-07	mapReasy	Producing Administrative Boundary Map with Additional Features Embedded
2017-09-07	modelwordcloud	Model Word Clouds
2017-09-07	multilaterals	Transitive Index Numbers for Cross-Sections and Panel Data
2017-09-07	PakPMICS2014Ch	Multiple Indicator Cluster Survey (MICS) 2014 Child Questionnaire Data for Punjab, Pakistan
2017-09-07	PakPMICS2014HH	Multiple Indicator Cluster Survey (MICS) 2014 Household Questionnaire Data for Punjab, Pakistan
2017-09-07	PakPMICS2014HL	Multiple Indicator Cluster Survey (MICS) 2014 Household Listing Questionnaire Data for Punjab, Pakistan
2017-09-07	PakPMICS2014Wm	Multiple Indicator Cluster Survey (MICS) 2014 Women Questionnaire Data for Punjab, Pakistan
2017-09-07	rstudioapi	Safely Access the RStudio API
2017-09-07	Rvcg	Manipulations of Triangular Meshes Based on the 'VCGLIB' API
2017-09-07	simex	SIMEX- And MCSIMEX-Algorithm for Measurement Error Models
2017-09-07	TileManager	Tile Manager
2017-09-07	unjoin	Separate a Data Frame by Normalization
2017-09-07	WordR	Rendering Word Documents with R Inline Code
2017-09-06	bootnet	Bootstrap Methods for Various Network Estimation Routines
2017-09-06	csabounds	Bounds on Distributional Treatment Effect Parameters
2017-09-06	DiagrammeR	Graph/Network Visualization
2017-09-06	FactorsR	Identification of the Factors Affecting Species Richness
2017-09-06	FRegSigCom	Functional Regression using Signal Compression Approach
2017-09-06	graphicalVAR	Graphical VAR for Experience Sampling Data
2017-09-06	madrat	May All Data be Reproducible and Transparent (MADRaT) *
2017-09-06	magclass	Data Class and Tools for Handling Spatial-Temporal Data
2017-09-06	Ohit	OGA+HDIC+Trim and High-Dimensional Linear Regression Models
2017-09-06	SmoothWin	Soft Windowing on Linear Regression
2017-09-06	spartan	Simulation Parameter Analysis R Toolkit ApplicatioN: Spartan
2017-09-06	SpatialPosition	Spatial Position Models
2017-09-06	SPEDInstabR	Estimation of the Relative Importance of Factors Affecting Species Distribution Based on Stability Concept
2017-09-06	survPresmooth	Presmoothed Estimation in Survival Analysis
2017-09-06	TNC	Temporal Network Centrality (TNC) Measures
2017-09-06	UdderQuarterInfectionData	Udder Quarter Infection Data
2017-09-06	writexl	Export Data Frames to 'xlsx' Format
2017-09-05	clusterPower	Power Calculations for Cluster-Randomized and Cluster-Randomized Crossover Trials
2017-09-05	DMRnet	Delete or Merge Regressors Algorithms for Linear and Logistic Model Selection and High-Dimensional Data
2017-09-05	FSelectorRcpp	'Rcpp' Implementation of 'FSelector' Entropy-Based Feature Selection Algorithms with a Sparse Matrix Support
2017-09-05	FuzzyNumbers.Ext.2	Apply Two Fuzzy Numbers on a Monotone Function
2017-09-05	genderBR	Predict Gender from Brazilian First Names
2017-09-05	graphql	A GraphQL Query Parser
2017-09-05	meanShiftR	A Computationally Efficient Mean Shift Implementation
2017-09-05	nima	Nima Hejazi's R Toolbox
2017-09-05	psda	Polygonal Symbolic Data Analysis
2017-09-05	rattle	Graphical User Interface for Data Science in R
2017-09-05	RcextTools	Analytical Procedures in Support of Brazilian Public Sector External Auditing
2017-09-05	VDSPCalibration	Statistical Methods for Designing and Analyzing a Calibration Study
2017-09-05	wooldridge	105 Data Sets from "Introductory Econometrics: A Modern Approach" by Jeffrey M. Wooldridge
2017-09-04	abcrf	Approximate Bayesian Computation via Random Forests
2017-09-04	Barycenter	Regularized Wasserstein Distances and Barycenters
2017-09-04	billboard	Contains Data of Billboard Hot 100 Songs
2017-09-04	BosonSampling	Classical Boson Sampling
2017-09-04	briskaR	Biological Risk Assessment
2017-09-04	cbanalysis	Coffee Break Descriptive Analysis
2017-09-04	CrossVA	Verbal Autopsy Data Transform for Use with Various Coding Algorithms
2017-09-04	dplyrAssist	RStudio Addin for Teaching and Learning Data Manipulation Using 'dplyr'
2017-09-04	freqdom.fda	Functional Time Series: Dynamic Functional Principal Components
2017-09-04	geex	An API for M-Estimation
2017-09-04	jackstraw	Statistical Inference of Variables Driving Systematic Variation
2017-09-04	msBP	Multiscale Bernstein Polynomials for Densities
2017-09-04	re2r	RE2 Regular Expression
2017-09-04	RGeode	Geometric Density Estimation
2017-09-04	sdpt3r	Semi-Definite Quadratic Linear Programming Solver
2017-09-04	threshr	Threshold Selection and Uncertainty for Extreme Value Analysis
2017-09-03	alphavantager	Lightweight R Interface to the Alpha Vantage API
2017-09-03	bairt	Bayesian Analysis of Item Response Theory Models
2017-09-03	doubcens	Survivor Function Estimation for Doubly Interval-Censored Failure Time Data
2017-09-03	ELMSurv	Extreme Learning Machine for Survival Analysis
2017-09-03	hddplot	Use Known Groups in High-Dimensional Data to Derive Scores for Plots
2017-09-03	iMediate	Likelihood Methods for Mediation Analysis
2017-09-03	pcdpca	Dynamic Principal Components for Periodically Correlated Functional Time Series
2017-09-03	ShinyImage	Image Manipulation, with an Emphasis on Journaling
2017-09-02	AlphaVantageClient	Wrapper for Alpha Vantage API
2017-09-02	BinarybalancedCut	Threshold Cut Point of Probability for a Binary Classifier Model
2017-09-02	coreCT	Programmatic Analysis of Sediment Cores Using Computed Tomography Imaging
2017-09-02	Fuzzy.p.value	Computing Fuzzy p-Value
2017-09-02	idem	Inference in Randomized Controlled Trials with Death and Missingness
2017-09-02	lvnet	Latent Variable Network Modeling
2017-09-02	mlVAR	Multi-Level Vector Autoregression
2017-09-02	mmap	Map Pages of Memory
2017-09-02	qgraph	Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation
2017-09-02	recosystem	Recommender System using Matrix Factorization
2017-09-01	afpt	Tools for Modelling of Animal Flight Performance
2017-09-01	AnnotationBustR	Extract Subsequences from GenBank Annotations
2017-09-01	ChemometricsWithR	Chemometrics with R - Multivariate Data Analysis in the Natural Sciences and Life Sciences
2017-09-01	commonmark	High Performance CommonMark and Github Markdown Rendering in R
2017-09-01	copula	Multivariate Dependence with Copulas
2017-09-01	cr17	Testing Differences Between Competing Risks Models and Their Visualisations
2017-09-01	CytobankAPIstats	Computes Signaling and Population Stats for Cytometry Data on Cytobank using 'CytobankAPI'
2017-09-01	DelayedEffect.Design	Sample Size and Power Calculations using the APPLE and SEPPLE Methods
2017-09-01	DEploid	Deconvolute Mixed Genomes with Unknown Proportions
2017-09-01	EcoIndR	Ecological Indicators
2017-09-01	edrGraphicalTools	Provides Tools for Dimension Reduction Methods
2017-09-01	FactoClass	Combination of Factorial Methods and Cluster Analysis
2017-09-01	freqdom	Frequency Domain Based Analysis: Dynamic PCA
2017-09-01	gdtools	Utilities for Graphical Rendering
2017-09-01	Inflation	Core Inflation
2017-09-01	jaod	Directory of Open Access Journals Client
2017-09-01	LGEWIS	Tests for Genetic Association/Gene-Environment Interaction in Longitudinal Studies
2017-09-01	NUCOMBog	NUtrient Cycling and COMpetition Model Undisturbed Open Bog Ecosystems in a Temperate to Sub-Boreal Climate
2017-09-01	pkggraph	A Consistent and Intuitive Platform to Explore the Dependencies of Packages on the Comprehensive R Archive Network Like Repositories
2017-09-01	protolite	Fast and Simple Object Serialization to Protocol Buffers
2017-09-01	R2MLwiN	Running 'MLwiN' from Within R
2017-09-01	R2SWF	Convert R Graphics to Flash Animations
2017-09-01	rDotNet	Low-Level Interface to the '.NET' Virtual Machine Along the Lines of the R C/Call API
2017-09-01	sptemExp	Constrained Spatiotemporal Mixed Models for Exposure Estimation
2017-09-01	swamp	Visualization, Analysis and Adjustment of High-Dimensional Data in Respect to Sample Annotations
2017-09-01	wru	Who are You? Bayesian Prediction of Racial Category Using Surname and Geolocation
2017-08-31	ari	Automated R Instructor
2017-08-31	catR	Generation of IRT Response Patterns under Computerized Adaptive Testing
2017-08-31	cdparcoord	Top Frequency-Based Parallel Coordinates
2017-08-31	itsadug	Interpreting Time Series and Autocorrelated Data Using GAMMs
2017-08-31	lmSupport	Support for Linear Models
2017-08-31	npphen	Vegetation Phenological Cycle and Anomaly Detection using Remote Sensing Data
2017-08-31	openair	Tools for the Analysis of Air Pollution Data
2017-08-31	RcmdrPlugin.EZR	R Commander Plug-in for the EZR (Easy R) Package
2017-08-31	wktmo	Converting Weekly Data to Monthly Data
2017-08-30	benchmarkme	Crowd Sourced System Benchmarks
2017-08-30	cenGAM	Censored Regression with Smooth Terms
2017-08-30	ctmm	Continuous-Time Movement Modeling
2017-08-30	deltar	Calculation of Delta R Values
2017-08-30	DTRreg	DTR Estimation and Inference via G-Estimation, Dynamic WOLS, and Q-Learning
2017-08-30	fastR2	Foundations and Applications of Statistics Using R (2nd Edition)
2017-08-30	h5	Interface to the 'HDF5' Library
2017-08-30	JSM	Semiparametric Joint Modeling of Survival and Longitudinal Data
2017-08-30	nor1mix	Normal (1-d) Mixture Models (S3 Classes and Methods)
2017-08-30	OasisR	Outright Tool for the Analysis of Spatial Inequalities and Segregation
2017-08-30	PIGE	Self Contained Gene Set Analysis for Gene- And Pathway-Environment Interaction Analysis
2017-08-30	plotfunctions	Various Functions to Facilitate Visualization of Data and Analysis
2017-08-30	robets	Forecasting Time Series with Robust Exponential Smoothing
2017-08-30	seedCCA	Seeded Canonical Correlation Analysis
2017-08-30	xxIRT	Practical Item Response Theory and Computer-Based Testing in R
2017-08-29	Anthropometry	Statistical Methods for Anthropometric Data
2017-08-29	benchmarkmeData	Data Set for the 'benchmarkme' Package
2017-08-29	datapack	A Flexible Container to Transport and Manipulate Data and Associated Resources
2017-08-29	difNLR	Detection of Differential Item Functioning (DIF) and Differential Distractor Functioning (DDF) by Non-Linear Regression Models
2017-08-29	ebmc	Ensemble-Based Methods for Class Imbalance Problem
2017-08-29	FPV	Testing Hypotheses via Fuzzy P-Value in Fuzzy Environment
2017-08-29	ggconf	Simpler Appearance Modification of 'ggplot2'
2017-08-29	HGNChelper	Handy Functions for Working with HGNC Gene Symbols and Affymetrix Probeset Identifiers
2017-08-29	LowWAFOMSobol	Low WAFOM Sobol Sequence
2017-08-29	mbir	Magnitude-Based Inferences
2017-08-29	mcompanion	Objects and Methods for Multi-Companion Matrices
2017-08-29	MTE	Maximum Tangent Likelihood and Other Robust Estimation for High-Dimensional Regression
2017-08-29	nomogramEx	Extract Equations from a Nomogram
2017-08-29	PeriodicTable	Periodic Table of the Elements
2017-08-29	poweRlaw	Analysis of Heavy Tailed Distributions
2017-08-29	qgam	Smooth Additive Quantile Regression Models
2017-08-29	sensitivitymult	Sensitivity Analysis for Observational Studies with Multiple Outcomes
2017-08-29	sgPLS	Sparse Group Partial Least Square Methods
2017-08-29	statquotes	Quotes on Statistics, Data Visualization and Science
2017-08-29	texPreview	Compile and Preview Snippets of 'LaTeX' in 'RStudio'
2017-08-29	uptasticsearch	Get Data Frame Representations of 'Elasticsearch' Results
2017-08-28	BAMBI	Bivariate Angular Mixture Models
2017-08-28	BNSP	Bayesian Non- And Semi-Parametric Model Fitting
2017-08-28	caffsim	Simulation of Plasma Caffeine Concentrations by Using Population Pharmacokinetic Model
2017-08-28	carData	Companion to Applied Regression Data Sets
2017-08-28	ccmm	Compositional Mediation Model
2017-08-28	cdfquantreg	Quantile Regression for Random Variables on the Unit Interval
2017-08-28	datetimeutils	Utilities for Dates and Times
2017-08-28	dmutate	Mutate Data Frames with Random Variates
2017-08-28	Eagle	Multiple Locus Association Mapping on a Genome-Wide Scale
2017-08-28	geomerge	Geospatial Data Integration
2017-08-28	googledrive	An Interface to Google Drive
2017-08-28	holdem	Texas Holdem Simulator
2017-08-28	kohonen	Supervised and Unsupervised Self-Organising Maps
2017-08-28	Matrix.utils	Data.frame-Like Operations on Sparse and Dense Matrix Objects
2017-08-28	multinet	Analysis and Mining of Multilayer Social Networks
2017-08-28	MVisAGe	Compute and Visualize Bivariate Associations
2017-08-28	nlts	(Non)Linear Time Series Analysis
2017-08-28	plot3D	Plotting Multi-Dimensional Data
2017-08-28	PSIMEX	SIMEX Algorithm on Pedigree Structures
2017-08-28	qicharts	Quality Improvement Charts
2017-08-28	qualpalr	Automatic Generation of Qualitative Color Palettes
2017-08-28	RcppSMC	Rcpp Bindings for Sequential Monte Carlo
2017-08-28	rebmix	Finite Mixture Modeling, Clustering & Classification
2017-08-28	SpatialEpiApp	A Shiny Web Application for the Analysis of Spatial and Spatio-Temporal Disease Data
2017-08-28	tsensembler	Dynamic Ensembles for Time Series Forecasting
2017-08-26	cchs	Cox Model for Case-Cohort Data with Stratified Subcohort-Selection
2017-08-26	rredlist	'IUCN' Red List Client
2017-08-25	downscale	Downscaling Species Occupancy
2017-08-25	edpclient	Empirical Data Platform Client
2017-08-25	LowWAFOMNX	Low WAFOM Niederreiter-Xing Sequence
2017-08-25	missRanger	Fast Imputation of Missing Values
2017-08-25	prcr	Person-Centered Analysis
2017-08-25	rgr	Applied Geochemistry EDA
2017-08-25	spm	Spatial Predictive Modeling
2017-08-25	webTRISr	A Wrapper Around 'WebTRIS' Traffic Flow API from Highways England
2017-08-24	accSDA	Accelerated Sparse Discriminant Analysis
2017-08-24	celestial	Collection of Common Astronomical Conversion Routines and Functions
2017-08-24	Ecohydmod	Ecohydrological Modelling
2017-08-24	ecoreg	Ecological Regression using Aggregate and Individual Data
2017-08-24	EpiCurve	Plot an Epidemic Curve
2017-08-24	gggenes	Draw Gene Arrow Maps in 'ggplot2'
2017-08-24	mExplorer	Identifying Master Gene Regulators from Gene Expression and DNA-Binding Data
2017-08-24	multdyn	Multiregression Dynamic Models
2017-08-24	mvPot	Multivariate Peaks-over-Threshold Modelling for Spatial Extreme Events
2017-08-24	noncomplyR	Bayesian Analysis of Randomized Experiments with Non-Compliance
2017-08-24	saemix	Stochastic Approximation Expectation Maximization (SAEM) Algorithm
2017-08-24	scales	Scale Functions for Visualization
2017-08-24	sensR	Thurstonian Models for Sensory Discrimination
2017-08-24	Strategy	Generic Framework to Analyze Trading Strategies
2017-08-24	tclust	Robust Trimmed Clustering
2017-08-24	worrms	World Register of Marine Species (WoRMS) Client
2017-08-23	ActiveDriver	Finding Cancer Driver Proteins with Enriched Mutations in Post-Translational Modification Sites
2017-08-23	CpGFilter	CpG Filtering Method Based on Intra-Class Correlation Coefficients
2017-08-23	Cyclops	Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis
2017-08-23	FPDclustering	PD-Clustering and Factor PD-Clustering
2017-08-23	genepop	Population Genetic Data Analysis Using Genepop
2017-08-23	genotypeR	SNP Genotype Marker Design and Analysis
2017-08-23	kntnr	R Client for 'kintone' API
2017-08-23	macc	Mediation Analysis of Causality under Confounding
2017-08-23	npcp	Some Nonparametric CUSUM Tests for Change-Point Detection in Possibly Multivariate Observations
2017-08-23	precrec	Calculate Accurate Precision-Recall and ROC (Receiver Operator Characteristics) Curves
2017-08-23	projmanr	Project Management Tools
2017-08-23	rmcorr	Repeated Measures Correlation
2017-08-23	RNAsmc	RNA Secondary Structure Module Mining, Comparison and Plotting
2017-08-23	rsconnect	Deployment Interface for R Markdown Documents and Shiny Applications
2017-08-23	SCRSELECT	Performs Bayesian Variable Selection on the Covariates in a Semi-Competing Risks Model
2017-08-23	shiny	Web Application Framework for R
2017-08-23	StepSignalMargiLike	Step-Wise Signal Extraction via Marginal Likelihood
2017-08-22	BPEC	Bayesian Phylogeographic and Ecological Clustering
2017-08-22	ConfigParser	Package to Parse an INI File, Including Variable Interpolation
2017-08-22	crplyr	A 'dplyr' Interface for Crunch
2017-08-22	esreg	Joint Quantile and Expected Shortfall Regression
2017-08-22	factoextra	Extract and Visualize the Results of Multivariate Data Analyses
2017-08-22	geigen	Calculate Generalized Eigenvalues, the Generalized Schur Decomposition and the Generalized Singular Value Decomposition of a Matrix Pair with Lapack
2017-08-22	iccbeta	Multilevel Model Intraclass Correlation for Slope Heterogeneity
2017-08-22	MendelianRandomization	Mendelian Randomization Package
2017-08-22	nloptr	R interface to NLopt
2017-08-22	pointblank	Validation of Local and Remote Data Tables
2017-08-22	QRegVCM	Quantile Regression in Varying-Coefficient Models
2017-08-22	R2DGC	Multiple Peak Alignment for 2D Gas Chromatography Mass Spectrometry Metabolomics Analysis
2017-08-22	Rmpi	Interface (Wrapper) to MPI (Message-Passing Interface)
2017-08-22	ShinyItemAnalysis	Test and Item Analysis via Shiny
2017-08-22	shp2graph	Convert a SpatialLinesDataFrame Object to an 'igraph'-Class Object
2017-08-22	simpleCache	Simply Caching R Objects
2017-08-22	SLICER	Selective Locally Linear Inference of Cellular Expression Relationships
2017-08-22	STARTdesign	Single to Double Arm Transition Design for Phase II Clinical Trials
2017-08-22	TrendInTrend	Odds Ratio Estimation and Power Calculation for the Trend in Trend Model
2017-08-22	Wrapped	Computes Pdf, Cdf, Quantile, Random Numbers and Provides Estimation for any Univariate Wrapped Distributions
2017-08-22	zic	Bayesian Inference for Zero-Inflated Count Models
2017-08-21	BayesBD	Bayesian Inference for Image Boundaries
2017-08-21	BeviMed	Bayesian Evaluation of Variant Involvement in Mendelian Disease
2017-08-21	cosinor2	Extended Tools for Cosinor Analysis of Rhythms
2017-08-21	descomponer	Seasonal Adjustment by Frequency Analysis
2017-08-21	fastcluster	Fast Hierarchical Clustering Routines for R and Python
2017-08-21	InfoTrad	Calculates the Probability of Informed Trading (PIN)
2017-08-21	ircor	Correlation Coefficients for Information Retrieval
2017-08-21	KappaGUI	GUI for Cohen's and Fleiss' Kappa
2017-08-21	vegdata	Access Vegetation Databases and Treat Taxonomy
2017-08-20	blastula	Easily Send HTML Email Messages
2017-08-20	ergm	Fit, Simulate and Diagnose Exponential-Family Models for Networks
2017-08-20	GRCdata	Parameter Inference and Optimal Designs for Grouped and/or Right-Censored Count Data
2017-08-20	happybiRthday	Calculate Upcoming Birthday Dates of Github Repos
2017-08-20	HSAUR2	A Handbook of Statistical Analyses Using R (2nd Edition)
2017-08-20	httr	Tools for Working with URLs and HTTP
2017-08-20	komadown	R Markdown Templates for the 'KOMA-Script' Classes
2017-08-20	latentnet	Latent Position and Cluster Models for Statistical Networks
2017-08-20	stpm	Stochastic Process Model for Analysis of Longitudinal and Time-to-Event Outcomes
2017-08-19	alleHap	Allele Imputation and Haplotype Reconstruction from Pedigree Databases
2017-08-19	ccRemover	Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing Data
2017-08-19	NetworkChange	Bayesian Package for Network Changepoint Analysis
2017-08-18	ahnr	An Implementation of the Artificial Hydrocarbon Networks
2017-08-18	CIAAWconsensus	Isotope Ratio Meta-Analysis
2017-08-18	dataone	R Interface to the DataONE REST API
2017-08-18	fuser	Fused Lasso for High-Dimensional Regression over Groups
2017-08-18	HSAUR	A Handbook of Statistical Analyses Using R (1st Edition)
2017-08-18	HSAUR3	A Handbook of Statistical Analyses Using R (3rd Edition)
2017-08-18	ImputeRobust	Robust Multiple Imputation with Generalized Additive Models for Location Scale and Shape
2017-08-18	mHG	Minimum-Hypergeometric Test
2017-08-18	odpc	One-Sided Dynamic Principal Components
2017-08-18	revengc	Reverse Engineering Censored, Decoupled Residential Data for Population Density Estimation
2017-08-18	sasMap	Static 'SAS' Code Analysis
2017-08-18	wppExplorer	Explorer of World Population Prospects
2017-08-17	CompDist	Multisection Composite Distributions
2017-08-17	ecoengine	Programmatic Interface to the Web Service Methods Provided by UC Berkeley's Natural History Data
2017-08-17	forwards	Data from Surveys Conducted by Forwards
2017-08-17	FuzzyLP	Fuzzy Linear Programming
2017-08-17	gamCopula	Generalized Additive Models for Bivariate Conditional Dependence Structures and Vine Copulas
2017-08-17	hei	Calculate Healthy Eating Index (HEI) Scores
2017-08-17	MODIStsp	A Tool for Automating Download and Preprocessing of MODIS Land Products Data
2017-08-17	outbreaker	Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
2017-08-17	polysat	Tools for Polyploid Microsatellite Analysis
2017-08-17	PowerTOST	Power and Sample Size Based on Two One-Sided t-Tests (TOST) for (Bio)Equivalence Studies
2017-08-17	RefManageR	Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management
2017-08-17	zipfR	Statistical Models for Word Frequency Distributions
2017-08-16	AssayCorrector	Detection and Correction of Spatial Bias in HTS Screens
2017-08-16	atlantistools	Process and Visualise Output from Atlantis Models
2017-08-16	CBCgrps	Compare Baseline Characteristics Between Groups
2017-08-16	diagram	Functions for Visualising Simple Graphs (Networks), Plotting Flow Diagrams
2017-08-16	HistData	Data Sets from the History of Statistics and Data Visualization
2017-08-16	IceCast	Apply Statistical Post-Processing to Improve Sea Ice Predictions
2017-08-16	markovchain	Easy Handling Discrete Time Markov Chains
2017-08-16	ncar	Noncompartmental Analysis for Pharmacokinetic Report
2017-08-16	NonCompart	Noncompartmental Analysis for Pharmacokinetic Data
2017-08-16	PAC	Partition-Assisted Clustering and Multiple Alignments of Networks
2017-08-16	rmapshaper	Client for 'mapshaper' for 'Geospatial' Operations
2017-08-16	statnet.common	Common R Scripts and Utilities Used by the Statnet Project Software
2017-08-16	xmeta	A Toolbox for Multivariate Meta-Analysis
2017-08-16	yuima	The YUIMA Project Package for SDEs
2017-08-15	ggquiver	Quiver Plots for 'ggplot2'
2017-08-15	GrpString	Patterns and Statistical Differences Between Two Groups of Strings
2017-08-15	Lahman	Sean 'Lahman' Baseball Database
2017-08-15	LBSPR	Length-Based Spawning Potential Ratio
2017-08-15	NLP	Natural Language Processing Infrastructure
2017-08-15	pbmcapply	Tracking the Progress of Mc*pply with Progress Bar
2017-08-15	PeakSegDP	Dynamic Programming Algorithm for Peak Detection in ChIP-Seq Data
2017-08-15	PeakSegJoint	Joint Peak Detection in Several ChIP-Seq Samples
2017-08-15	preseqR	Predicting the Number of Species in a Random Sample
2017-08-15	ReacTran	Reactive Transport Modelling in 1d, 2d and 3d
2017-08-15	samon	Sensitivity Analysis for Missing Data
2017-08-15	sdmpredictors	Species Distribution Modelling Predictor Datasets
2017-08-15	SorptionAnalysis	Static Adsorption Experiment Plotting and Analysis
2017-08-15	usmap	US Maps Including Alaska and Hawaii
2017-08-14	CARBayesST	Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data
2017-08-14	CIplot	Functions to Plot Confidence Interval
2017-08-14	ConfoundedMeta	Sensitivity Analyses for Unmeasured Confounding in Meta-Analyses
2017-08-14	fastJT	Efficient Jonckheere-Terpstra Test Statistics for Robust Machine Learning and Genome-Wide Association Studies
2017-08-14	fda	Functional Data Analysis
2017-08-14	IsoriX	Isoscape Computation and Inference of Spatial Origins using Mixed Models
2017-08-14	jtGWAS	Efficient Jonckheere-Terpstra Test Statistics
2017-08-14	ldstatsHD	Linear Dependence Statistics for High-Dimensional Data
2017-08-14	limSolve	Solving Linear Inverse Models
2017-08-14	lmmen	Linear Mixed Model Elastic Net
2017-08-14	MPLikelihoodWB	Modified Profile Likelihood Estimation for Weibull Shape and Regression Parameters
2017-08-14	rbi	R Interface to LibBi
2017-08-14	RealVAMS	Multivariate VAM Fitting
2017-08-14	RMySQL	Database Interface and 'MySQL' Driver for R
2017-08-14	robCompositions	Robust Estimation for Compositional Data
2017-08-14	robustrao	An Extended Rao-Stirling Diversity Index to Handle Missing Data
2017-08-14	rts	Raster Time Series Analysis
2017-08-14	SEERaBomb	SEER and Atomic Bomb Survivor Data Analysis Tools
2017-08-14	smoof	Single and Multi-Objective Optimization Test Functions
2017-08-14	sparsediscrim	Sparse and Regularized Discriminant Analysis
2017-08-14	tsiR	An Implementation of the TSIR Model
2017-08-14	widyr	Widen, Process, then Re-Tidy Data
2017-08-13	BLPestimatoR	Performs a BLP Demand Estimation
2017-08-13	Delaporte	Statistical Functions for the Delaporte Distribution
2017-08-13	DoE.base	Full Factorials, Orthogonal Arrays and Base Utilities for DoE Packages
2017-08-13	esvis	Visualization and Estimation of Effect Sizes
2017-08-13	grec	GRadient-Based RECognition of Spatial Patterns in Environmental Data
2017-08-13	kSamples	K-Sample Rank Tests and their Combinations
2017-08-13	OrgMassSpecR	Organic Mass Spectrometry
2017-08-13	rdpla	Client for the Digital Public Library of America ('DPLA')
2017-08-13	threejs	Interactive 3D Scatter Plots, Networks and Globes
2017-08-12	ClustOfVar	Clustering of Variables
2017-08-12	crminer	Fetch 'Scholary' Full Text from 'Crossref'
2017-08-12	dataMeta	Create and Append a Data Dictionary for an R Dataset
2017-08-12	rmapzen	Client for the 'Mapzen' API
2017-08-11	biospear	Biomarker Selection in Penalized Regression Models
2017-08-11	depend.truncation	Statistical Inference for Parametric and Semiparametric Models Based on Dependently Truncated Data
2017-08-11	IAbin	Plotting N-T Plane for Decision on Performing an Interim Analysis
2017-08-11	rasterList	A Raster Where Cells are Generic Objects
2017-08-11	rcv	Ranked Choice Voting
2017-08-11	rtimes	Client for New York Times 'APIs'
2017-08-11	strvalidator	Process Control and Internal Validation of Forensic STR Kits
2017-08-11	TreatmentSelection	Evaluate Treatment Selection Biomarkers
2017-08-11	valaddin	Functional Input Validation
2017-08-11	vanddraabe	Identification and Statistical Analysis of Conserved Waters in Proteins
2017-08-10	BCEE	The Bayesian Causal Effect Estimation Algorithm
2017-08-10	CytobankAPI	Cytobank API Wrapper for R
2017-08-10	RKEEL	Using Keel in R Code
2017-08-10	SALTSampler	Efficient Sampling on the Simplex
2017-08-10	vocaldia	Create and Manipulate Vocalisation Diagrams
2017-08-09	clue	Cluster Ensembles
2017-08-09	eurostat	Tools for Eurostat Open Data
2017-08-09	GEint	Misspecified Models for Gene-Environment Interaction
2017-08-09	geomorph	Geometric Morphometric Analyses of 2D/3D Landmark Data
2017-08-09	gsw	Gibbs Sea Water Functions
2017-08-09	IPMRF	Intervention in Prediction Measure (IPM) for Random Forests
2017-08-09	MBSGS	Multivariate Bayesian Sparse Group Selection with Spike and Slab
2017-08-09	openSTARS	An Open Source Implementation of the 'ArcGIS' Toolbox 'STARS'
2017-08-09	phylocurve	Phylogenetic Comparative Methods for High-Dimensional Traits
2017-08-09	plotROC	Generate Useful ROC Curve Charts for Print and Interactive Use
2017-08-09	poker	Play Texas Hold Em Poker
2017-08-09	ProjectTemplate	Automates the Creation of New Statistical Analysis Projects
2017-08-09	PsyControl	CUSUM Person Fit Statistics
2017-08-09	RcmdrPlugin.RiskDemo	R Commander Plug-in for Risk Demonstration
2017-08-09	relations	Data Structures and Algorithms for Relations
2017-08-09	retistruct	Retinal Reconstruction Program
2017-08-09	zCompositions	Treatment of Zeros and Nondetects in Compositional Data Sets
2017-08-08	EbayesThresh	Empirical Bayes Thresholding and Related Methods
2017-08-08	hydroGOF	Goodness-of-Fit Functions for Comparison of Simulated and Observed Hydrological Time Series
2017-08-08	kangar00	Kernel Approaches for Nonlinear Genetic Association Regression
2017-08-08	kml3d	K-Means for Joint Longitudinal Data
2017-08-08	lumberjack	Track Changes in Data
2017-08-08	npbr	Nonparametric Boundary Regression
2017-08-08	OHPL	Ordered Homogeneity Pursuit Lasso for Group Variable Selection
2017-08-08	pec	Prediction Error Curves for Risk Prediction Models in Survival Analysis
2017-08-08	plaqr	Partially Linear Additive Quantile Regression
2017-08-08	randomizeR	Randomization for Clinical Trials
2017-08-08	raw	R Actuarial Workshops
2017-08-08	RcmdrPlugin.aRnova	R Commander Plug-in for Repeated-Measures ANOVA
2017-08-08	RMark	R Code for Mark Analysis
2017-08-08	simPop	Simulation of Synthetic Populations for Survey Data Considering Auxiliary Information
2017-08-08	skmeans	Spherical k-Means Clustering
2017-08-08	spatialkernel	Non-Parametric Estimation of Spatial Segregation in a Multivariate Point Process
2017-08-07	aiRthermo	Atmospheric Thermodynamics and Visualization
2017-08-07	blink	Record Linkage for Empirically Motivated Priors
2017-08-07	blsAPI	Request Data from the U.S. Bureau of Labor Statistics API
2017-08-07	default	Change the Default Arguments in R Functions
2017-08-07	dggridR	Discrete Global Grids for R
2017-08-07	dlstats	Download Stats of R Packages
2017-08-07	ggbeeswarm	Categorical Scatter (Violin Point) Plots
2017-08-07	hydroTSM	Time Series Management, Analysis and Interpolation for Hydrological Modelling
2017-08-07	multiCA	Multinomial Cochran-Armitage Trend Test
2017-08-07	permGS	Permutational Group Sequential Test for Time-to-Event Data
2017-08-07	sparsepp	'Rcpp' Interface to 'sparsepp'
2017-08-07	statesRcontiguous	Shapefiles for the Contiguous United States of America
2017-08-07	tsPI	Improved Prediction Intervals for ARIMA Processes and Structural Time Series
2017-08-07	usl	Analyze System Scalability with the Universal Scalability Law
2017-08-07	validate	Data Validation Infrastructure
2017-08-07	walrus	Robust Statistical Methods
2017-08-06	corregp	Functions and Methods for Correspondence Regression
2017-08-06	pander	An R 'Pandoc' Writer
2017-08-06	reshape	Flexibly Reshape Data
2017-08-06	restfulr	R Interface to RESTful Web Services
2017-08-06	rsolr	R to Solr Interface
2017-08-06	VARtests	Tests for Error Autocorrelation and ARCH Errors in Vector Autoregressive Models
2017-08-05	cetcolor	CET Perceptually Uniform Colour Maps
2017-08-05	ggversa	Graficas Versatiles Con 'ggplot2'
2017-08-05	italy	The Italian Survey on Household and Wealth, 2008 and 2010
2017-08-05	iterLap	Approximate Probability Densities by Iterated Laplace Approximations
2017-08-05	itunesr	To Access iTunes App Store Ratings and Reviews using R
2017-08-05	ldhmm	Hidden Markov Model for Financial Time-Series Based on Lambda Distribution
2017-08-05	MCPMod	Design and Analysis of Dose-Finding Studies
2017-08-05	r2glmm	Computes R Squared for Mixed (Multilevel) Models
2017-08-04	CrossValidate	Classes and Methods for Cross Validation of "Class Prediction" Algorithms
2017-08-04	equaltestMI	Examine Measurement Invariance via Equivalence Testing and Projection Method
2017-08-04	GFA	Group Factor Analysis
2017-08-04	ITGM	Individual Tree Growth Modeling
2017-08-04	lctools	Local Correlation, Spatial Inequalities, Geographically Weighted Regression and Other Tools
2017-08-04	MCMCprecision	Precision of Discrete Parameters in Transdimensional MCMC
2017-08-04	MCS	Model Confidence Set Procedure
2017-08-04	metaBMA	Bayesian Model Averaging for Random and Fixed Effects Meta-Analysis
2017-08-04	microPop	Modelling Microbial Populations
2017-08-04	mixedsde	Estimation Methods for Stochastic Differential Mixed Effects Models
2017-08-04	RankAggreg	Weighted Rank Aggregation
2017-08-04	RcppXPtrUtils	XPtr Add-Ons for 'Rcpp'
2017-08-04	soilcarbon	Tools to Analyze Soil Carbon Database Created by Powell Center Working Group
2017-08-04	SpatialAcc	Spatial Accessibility Measures
2017-08-04	spbabel	Convert Spatial Data Using Tidy Tables
2017-08-03	banR	R Client for the BAN API
2017-08-03	BIEN	Tools for Accessing the Botanical Information and Ecology Network Database
2017-08-03	cranlike	Tools for 'CRAN'-Like Repositories
2017-08-03	desc	Manipulate DESCRIPTION Files
2017-08-03	echogram	Echogram Visualisation and Analysis
2017-08-03	eggCounts	Hierarchical Modelling of Faecal Egg Counts
2017-08-03	EMAtools	Data Management Tools for Real-Time Monitoring/Ecological Momentary Assessment Data
2017-08-03	GAparsimony	Searching Parsimony Models with Genetic Algorithms
2017-08-03	ggsignif	Significance Brackets for 'ggplot2'
2017-08-03	glmBfp	Bayesian Fractional Polynomials for GLMs
2017-08-03	Grid2Polygons	Convert Spatial Grids to Polygons
2017-08-03	IntegratedJM	Joint Modeling of the Gene-Expression and Bioassay Data, Taking Care of the Effect Due to a Fingerprint Feature
2017-08-03	irace	Iterated Racing for Automatic Algorithm Configuration
2017-08-03	lmmpar	Parallel Linear Mixed Model
2017-08-03	multistate	Fitting Multistate Models
2017-08-03	rddensity	Manipulation Testing Based on Density Discontinuity
2017-08-03	SKAT	SNP-Set (Sequence) Kernel Association Test
2017-08-03	spex	Spatial Extent as Polygons with Projection
2017-08-03	svenssonm	Svensson's Method
2017-08-02	adaptiveGPCA	Adaptive Generalized PCA
2017-08-02	ambhasGW	Ground Water Modelling
2017-08-02	geohash	Tools for Geohash Creation and Manipulation
2017-08-02	GGally	Extension to 'ggplot2'
2017-08-02	GreedyEPL	Greedy Expected Posterior Loss
2017-08-02	IrishDirectorates	Irish Companies' Boards from 2003 to 2013
2017-08-02	lmom	L-Moments
2017-08-02	lmomRFA	Regional Frequency Analysis using L-Moments
2017-08-02	MixtureRegLTIC	Mixture Regression Models for Left-Truncated and Interval-Censored Data
2017-08-02	NPflow	Bayesian Nonparametrics for Automatic Gating of Flow-Cytometry Data
2017-08-02	rgeolocate	IP Address Geolocation
2017-08-02	rtimicropem	Supports the Analysis of RTI MicroPEM Output Files
2017-08-02	Sequential	Exact Sequential Analysis for Poisson and Binomial Data
2017-08-02	shinystan	Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models
2017-08-02	subgroup.discovery	Subgroup Discovery and Bump Hunting
2017-08-02	tbl2xts	Convert Tibbles or Data Frames to Xts Easily
2017-08-02	ThermIndex	Calculate Thermal Indexes
2017-08-02	tourr	Implement Tour Methods in R Code
2017-08-01	censusapi	Retrieve Data from the Census APIs
2017-08-01	dejaVu	Multiple Imputation for Recurrent Events
2017-08-01	dfped	Extrapolation and Bridging of Adult Information in Early Phase Dose-Finding Paediatrics Studies
2017-08-01	DoEstRare	Rare Variant Association Test Based on Position Density Estimation
2017-08-01	eco	Ecological Inference in 2x2 Tables
2017-08-01	fasjem	A Fast and Scalable Joint Estimator for Learning Multiple Related Sparse Gaussian Graphical Models
2017-08-01	glmnetUtils	Utilities for 'Glmnet'
2017-08-01	hIRT	Hierarchical Item Response Theory Models
2017-08-01	iqspr	Inverse Molecular Design
2017-08-01	kpmt	Known Population Median Test
2017-08-01	Rborist	Extensible, Parallelizable Implementation of the Random Forest Algorithm
2017-08-01	rmda	Risk Model Decision Analysis
2017-08-01	seqinr	Biological Sequences Retrieval and Analysis
2017-08-01	structree	Tree-Structured Clustering
2017-07-31	bio3d	Biological Structure Analysis
2017-07-31	CompareCausalNetworks	Interface to Diverse Estimation Methods of Causal Networks
2017-07-31	GeNetIt	Spatial Graph-Theoretic Genetic Gravity Modelling
2017-07-31	GWRM	Generalized Waring Regression Model for Count Data
2017-07-31	LindenmayeR	Functions to Explore L-Systems (Lindenmayer Systems)
2017-07-31	nonlinearICP	Invariant Causal Prediction for Nonlinear Models
2017-07-31	optional	Optional Types and Pattern Matching
2017-07-31	quickblock	Quick Threshold Blocking
2017-07-31	RODBCext	Parameterized Queries Extension for RODBC
2017-07-31	SimComp	Simultaneous Comparisons for Multiple Endpoints
2017-07-31	stringdist	Approximate String Matching and String Distance Functions
2017-07-31	utiml	Utilities for Multi-Label Learning
2017-07-30	boot	Bootstrap Functions (Originally by Angelo Canty for S)
2017-07-30	BSDA	Basic Statistics and Data Analysis
2017-07-30	highfrequency	Tools for Highfrequency Data Analysis
2017-07-30	lvec	Out of Memory Vectors
2017-07-30	phybreak	Analysis of Outbreaks with Sequence Data
2017-07-30	processx	Execute and Control System Processes
2017-07-30	pseudo	Computes Pseudo-Observations for Modeling
2017-07-29	blandr	Bland-Altman Method Comparison
2017-07-29	fChange	Change Point Analysis in Functional Data
2017-07-29	MasterBayes	ML and MCMC Methods for Pedigree Reconstruction and Analysis
2017-07-29	plotly	Create Interactive Web Graphics via 'plotly.js'
2017-07-29	rAverage	Parameter Estimation for the Averaging Model of Information Integration Theory
2017-07-29	rclipboard	Shiny/R Wrapper for 'clipboard.js'
2017-07-29	RkMetrics	Hybrid Mortality Estimation
2017-07-29	sdcTable	Methods for Statistical Disclosure Control in Tabular Data
2017-07-29	soilwater	Implementation of Parametric Formulas for Soil Water Retention or Conductivity Curve
2017-07-28	CDVineCopulaConditional	Sampling from Conditional C- and D-Vine Copulas
2017-07-28	gamsel	Fit Regularization Path for Generalized Additive Models
2017-07-28	HiveR	2D and 3D Hive Plots for R
2017-07-28	idmTPreg	Regression Model for Progressive Illness Death Data
2017-07-28	incadata	Recognize and Handle Data in Formats Used by Swedish Cancer Centers
2017-07-28	js	Tools for Working with JavaScript in R
2017-07-28	mmtsne	Multiple Maps t-SNE
2017-07-28	rmatio	Read and Write 'Matlab' Files
2017-07-27	arulesCBA	Classification Based on Association Rules
2017-07-27	Delta	Measure of Agreement Between Two Raters
2017-07-27	dHSIC	Independence Testing via Hilbert Schmidt Independence Criterion
2017-07-27	fastR	Foundations and Applications of Statistics Using R
2017-07-27	lsplsGlm	Classification using LS-PLS for Logistic Regression
2017-07-27	mosaicCalc	Function-Based Numerical and Symbolic Differentiation and Antidifferentiation
2017-07-27	optiSolve	Linear, Quadratic, and Rational Optimization
2017-07-27	plotmo	Plot a Model's Response and Residuals
2017-07-27	RHMS	Hydrologic Modelling System for R Users
2017-07-27	simsurv	Simulate Survival Data
2017-07-27	windfarmGA	Genetic Algorithm for Wind Farm Layout Optimization
2017-07-26	CensMixReg	Censored Linear Mixture Regression Models
2017-07-26	exCon	Interactive Exploration of Contour Data
2017-07-26	ggpval	Annotate Statistical Tests for 'ggplot2'
2017-07-26	iRF	iterative Random Forests
2017-07-26	maxTPR	Maximizing the TPR for a Specified FPR
2017-07-26	mirtCAT	Computerized Adaptive Testing with Multidimensional Item Response Theory
2017-07-26	sandwich	Robust Covariance Matrix Estimators
2017-07-26	SpecHelpers	Spectroscopy Related Utilities
2017-07-26	sweep	Tidy Tools for Forecasting
2017-07-26	table1xls	Exports Reproducible Summary Tables to Multi-Tab Spreadsheet Files (.xls or .xlsx)
2017-07-26	unrepx	Analysis and Graphics for Unreplicated Experiments
2017-07-25	aniDom	Inferring Dominance Hierarchies and Estimating Uncertainty
2017-07-25	bayeslongitudinal	Adjust Longitudinal Regression Models Using Bayesian Methodology
2017-07-25	CerioliOutlierDetection	Outlier Detection Using the Iterated RMCD Method of Cerioli (2010)
2017-07-25	concaveman	A Very Fast 2D Concave Hull Algorithm
2017-07-25	datasus	An Interface to DATASUS System
2017-07-25	gamm4	Generalized Additive Mixed Models using 'mgcv' and 'lme4'
2017-07-25	ggseqlogo	A 'ggplot2' Extension for Drawing Publication-Ready Sequence Logos
2017-07-25	MiRKAT	Microbiome Regression-Based Kernel Association Test
2017-07-25	MRTSampleSize	A Sample Size Calculator for Micro-Randomized Trials
2017-07-25	PowerNormal	Power Normal Distribution
2017-07-25	qtlmt	Tools for Mapping Multiple Complex Traits
2017-07-25	RxnSim	Functions to Compute Chemical Reaction Similarity
2017-07-25	seqICP	Sequential Invariant Causal Prediction
2017-07-25	sequoia	Pedigree Inference from SNPs
2017-07-25	sidrar	An Interface to IBGE's SIDRA API
2017-07-25	timetk	A Tool Kit for Working with Time Series in R
2017-07-25	treeDA	Tree-Based Discriminant Analysis
2017-07-25	WhatIf	Evaluate Counterfactuals
2017-07-24	APSIM	General Utility Functions for the 'Agricultural Production Systems Simulator'
2017-07-24	devEMF	EMF Graphics Output Device
2017-07-24	EFS	Tool for Ensemble Feature Selection
2017-07-24	estprod	Estimation of Production Functions
2017-07-24	GGEBiplots	GGE Biplots with 'ggplot2'
2017-07-24	gIPFrm	Generalized Iterative Proportional Fitting for Relational Models
2017-07-24	l0ara	Sparse Generalized Linear Model with L0 Approximation for Feature Selection
2017-07-24	modelr	Modelling Functions that Work with the Pipe
2017-07-24	pcensmix	Model Fitting to Progressively Censored Mixture Data
2017-07-24	reproducer	Reproduce Statistical Analyses and Meta-Analyses
2017-07-24	simglm	Simulate Models Based on the Generalized Linear Model
2017-07-24	spup	Spatial Uncertainty Propagation Analysis
2017-07-23	aRpsDCA	Arps Decline Curve Analysis in R
2017-07-23	c2c	Compare Two Classifications or Clustering Solutions of Varying Structure
2017-07-23	geoGAM	Select Sparse Geoadditive Models for Spatial Prediction
2017-07-23	mboost	Model-Based Boosting
2017-07-23	RQDA	R-Based Qualitative Data Analysis
2017-07-23	wgeesel	Weighted Generalized Estimating Equations and Model Selection
2017-07-22	dsmodels	A Language to Facilitate Simulation and Visualization of Two-Dimensional Dynamical Systems
2017-07-22	faoutlier	Influential Case Detection Methods for Factor Analysis and Structural Equation Models
2017-07-22	modules	Self Contained Units of Source Code
2017-07-22	prisonbrief	Downloads and Parses World Prison Brief Data
2017-07-22	vcov	Variance-Covariance Matrices and Standard Errors
2017-07-21	bayesm	Bayesian Inference for Marketing/Micro-Econometrics
2017-07-21	bold	Interface to Bold Systems API
2017-07-21	FuzzyStatProb	Fuzzy Stationary Probabilities from a Sequence of Observations of an Unknown Markov Chain
2017-07-21	getPass	Masked User Input
2017-07-21	igraph	Network Analysis and Visualization
2017-07-21	IMPACT	The Impact of Items
2017-07-21	metansue	Meta-Analysis of Studies with Non Statistically-Significant Unreported Effects
2017-07-21	minerva	Maximal Information-Based Nonparametric Exploration for Variable Analysis
2017-07-21	moveHMM	Animal Movement Modelling using Hidden Markov Models
2017-07-21	pollen	Analysis of Aerobiological Data
2017-07-21	Rdrools	A Rules Engine Based on 'Drools'
2017-07-21	spgs	Statistical Patterns in Genomic Sequences
2017-07-21	spNNGP	Spatial Regression Models for Large Datasets using Nearest Neighbor Gaussian Processes
2017-07-20	ChaosGame	Chaos Game
2017-07-20	DCA	Dynamic Correlation Analysis for High Dimensional Data
2017-07-20	pcaL1	L1-Norm PCA Methods
2017-07-20	pdp	Partial Dependence Plots
2017-07-20	productivity	Indices of Productivity Using Data Envelopment Analysis (DEA)
2017-07-20	spark	'Sparklines' in the 'R' Terminal
2017-07-19	atus	American Time Use Survey Data
2017-07-19	BayesianGLasso	Bayesian Graphical Lasso
2017-07-19	beginr	Functions for R Beginners
2017-07-19	corHMM	Analysis of Binary Character Evolution
2017-07-19	Counterfactual	Estimation and Inference Methods for Counterfactual Analysis
2017-07-19	cubature	Adaptive Multivariate Integration over Hypercubes
2017-07-19	datadogr	R Client for 'Datadog' API
2017-07-19	drfit	Dose-Response Data Evaluation
2017-07-19	FastSF	Fast Structural Filtering
2017-07-19	geofacet	'ggplot2' Faceting Utilities for Geographical Data
2017-07-19	harmonicmeanp	Harmonic Mean p-Values and Model Averaging by Mean Maximum Likelihood
2017-07-19	ibmdbR	IBM in-Database Analytics for R
2017-07-19	ivregEX	Create Independent Evidence in IV Analyses and Do Sensitivity Analysis in Regression and IV Analysis
2017-07-19	knitrBootstrap	'knitr' Bootstrap Framework
2017-07-19	liquidSVM	A Fast and Versatile SVM Package
2017-07-19	mindr	Convert Files Between Markdown or Rmarkdown Files and Mindmaps
2017-07-19	OBRE	Optimal B-Robust Estimator Tools
2017-07-19	refimpact	API Wrapper for the UK REF 2014 Impact Case Studies Database
2017-07-19	scifigure	Visualize Reproducibility and Replicability in a Comparison of Scientific Studies
2017-07-19	sfinx	Straightforward Filtering Index for AP-MS Data Analysis (SFINX)
2017-07-19	spBayes	Univariate and Multivariate Spatial-Temporal Modeling
2017-07-19	stabs	Stability Selection with Error Control
2017-07-19	subscreen	Systematic Screening of Study Data for Subgroup Effects
2017-07-19	surveydata	Tools to Work with Survey Data
2017-07-19	sybil	Efficient Constrained Based Modelling
2017-07-18	diffpriv	Easy Differential Privacy
2017-07-18	kerndwd	Distance Weighted Discrimination (DWD) and Kernel Methods
2017-07-18	mbbefd	Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and Destruction Rate Modelling
2017-07-18	optparse	Command Line Option Parser
2017-07-18	ouch	Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses
2017-07-18	RcppAPT	'Rcpp' Interface to the APT Package Manager
2017-07-18	riverdist	River Network Distance Computation and Applications
2017-07-18	rodham	Fetch Hillary Rodham Clinton's Emails
2017-07-18	Rvmmin	Variable Metric Nonlinear Function Minimization
2017-07-18	social	Social Autocorrelation
2017-07-18	SuperLearner	Super Learner Prediction
2017-07-18	toOrdinal	Cardinal to Ordinal Number Conversion
2017-07-18	wfe	Weighted Linear Fixed Effects Regression Models for Causal Inference
2017-07-17	brlrmr	Bias Reduction with Missing Binary Response
2017-07-17	Census2016	Data from the Australian Census 2016
2017-07-17	cnbdistr	Conditional Negative Binomial Distribution
2017-07-17	corr2D	Implementation of 2D Correlation Analysis in R
2017-07-17	ercv	Fitting Tails by the Empirical Residual Coefficient of Variation
2017-07-17	flexsurvcure	Flexible Parametric Cure Models
2017-07-17	fragilityindex	Fragility Index
2017-07-17	ggtern	An Extension to 'ggplot2', for the Creation of Ternary Diagrams
2017-07-17	Hotelling	Hotelling's T^2 Test and Variants
2017-07-17	LCox	A Tool for Selecting Genes Related to Survival Outcomes using Longitudinal Gene Expression Data
2017-07-17	mclogit	Mixed Conditional Logit Models
2017-07-17	mixsmsn	Fitting Finite Mixture of Scale Mixture of Skew-Normal Distributions
2017-07-17	PearsonDS	Pearson Distribution System
2017-07-17	sergeant	Tools to Transform and Query Data with 'Apache' 'Drill'
2017-07-17	spc4sts	Statistical Process Control for Stochastic Textured Surfaces
2017-07-17	timeSeq	Detecting Differentially Expressed Genes in Time Course RNA-Seq Data
2017-07-16	gh	'GitHub' 'API'
2017-07-16	llogistic	The L-Logistic Distribution
2017-07-16	paco	Procrustes Application to Cophylogenetic Analysis
2017-07-16	rPraat	Interface to Praat
2017-07-16	senstrat	Sensitivity Analysis for Stratified Observational Studies
2017-07-16	vembedr	Functions to Embed Video in HTML
2017-07-15	centiserve	Find Graph Centrality Indices
2017-07-15	docker	Wraps Docker Python SDK
2017-07-15	DrImpute	Imputing Dropout Events in Single-Cell RNA-Sequencing Data
2017-07-15	mapedit	Interactive Editing of Spatial Data in R
2017-07-15	randomForestExplainer	Explaining and Visualizing Random Forests in Terms of Variable Importance
2017-07-15	spongecake	Transform a Movie into a Synthetic Picture
2017-07-15	tetraclasse	Satisfaction Analysis using Tetraclasse Model and Llosa Matrix
2017-07-15	TSF	Two Stage Forecasting (TSF) for Long Memory Time Series in Presence of Structural Break
2017-07-14	BimodalIndex	The Bimodality Index
2017-07-14	ClustGeo	Hierarchical Clustering with Spatial Constraints
2017-07-14	credsubs	Credible Subsets
2017-07-14	deSolve	Solvers for Initial Value Problems of Differential Equations ('ODE', 'DAE', 'DDE')
2017-07-14	geotoolsR	Tools to Improve the Use of Geostatistic
2017-07-14	grt	General Recognition Theory
2017-07-14	mize	Unconstrained Numerical Optimization Algorithms
2017-07-14	sitreeE	Sitree Extensions
2017-07-14	stoRy	Theme Enrichment Analysis for Stories
2017-07-14	survtmle	Compute Targeted Minimum Loss-Based Estimates in Right-Censored Survival Settings
2017-07-14	teachingApps	Apps for Teaching Statistics, R Programming, and Shiny App Development
2017-07-13	acebayes	Optimal Bayesian Experimental Design using the ACE Algorithm
2017-07-13	ClusVis	Gaussian-Based Visualization of Generic Model-Based Clustering
2017-07-13	ecodist	Dissimilarity-Based Functions for Ecological Analysis
2017-07-13	GenAlgo	Classes and Methods to Use Genetic Algorithms for Feature Selection
2017-07-13	ICEbox	Individual Conditional Expectation Plot Toolbox
2017-07-13	interfr	Interference Color Charts for Polarized Light Microscopy
2017-07-13	Modeler	Classes and Methods for Training and Using Binary Prediction Models
2017-07-13	mountainplot	Mountain Plots, Folded Empirical Cumulative Distribution Plots
2017-07-13	mwaved	Multichannel Wavelet Deconvolution with Additive Long Memory Noise
2017-07-13	noaastormevents	Explore NOAA Storm Events Database
2017-07-13	pagenum	Put Page Numbers on Graphics
2017-07-13	PreProcess	Basic Functions for Pre-Processing Microarrays
2017-07-13	RNRCS	Download NRCS Data
2017-07-13	RPresto	DBI Connector to Presto
2017-07-13	swmmr	R Interface for US EPA's SWMM
2017-07-13	UBL	An Implementation of Re-Sampling Approaches to Utility-Based Learning for Both Classification and Regression Tasks
2017-07-12	BayesianNetwork	Bayesian Network Modeling and Analysis
2017-07-12	CEGO	Combinatorial Efficient Global Optimization
2017-07-12	ClassDiscovery	Classes and Methods for "Class Discovery" with Microarrays or Proteomics
2017-07-12	facebook.S4	Access to Facebook API V2 via a Set of S4 Classes
2017-07-12	hommel	Methods for Closed Testing with Simes Inequality, in Particular Hommel's Method
2017-07-12	interim	Scheduling Interim Analyses in Clinical Trials
2017-07-12	JOUSBoost	Implements Under/Oversampling for Probability Estimation
2017-07-12	MAVIS	Meta Analysis via Shiny
2017-07-12	multisensi	Multivariate Sensitivity Analysis
2017-07-12	pcalg	Methods for Graphical Models and Causal Inference
2017-07-12	PeakSegOptimal	Optimal Segmentation Subject to Up-Down Constraints
2017-07-12	rLiDAR	LiDAR Data Processing and Visualization
2017-07-12	SmoothHazard	Estimation of Smooth Hazard Models for Interval-Censored Data with Applications to Survival and Illness-Death Models
2017-07-12	VCA	Variance Component Analysis
2017-07-11	ClassComparison	Classes and Methods for "Class Comparison" Problems on Microarrays
2017-07-11	GenomicTools	Collection of Tools for Genomic Data Analysis
2017-07-11	integIRTy	Integrating Multiple Modalities of High Throughput Assays Using Item Response Theory
2017-07-11	mediation	Causal Mediation Analysis
2017-07-11	multgee	GEE Solver for Correlated Nominal or Ordinal Multinomial Responses
2017-07-11	NameNeedle	Using Needleman-Wunsch to Match Sample Names
2017-07-11	onion	Octonions and Quaternions
2017-07-11	qcc	Quality Control Charts
2017-07-11	RcmdrPlugin.temis	Graphical Integrated Text Mining Solution
2017-07-11	roots	Reconstructing Ordered Ontogenic Trajectories
2017-07-11	samplingVarEst	Sampling Variance Estimation
2017-07-11	SensusR	Sensus Analytics
2017-07-11	ShrinkCovMat	Shrinkage Covariance Matrix Estimators
2017-07-11	SimCorMultRes	Simulates Correlated Multinomial Responses
2017-07-11	Umpire	Simulating Realistic Gene Expression Data
2017-07-11	visdat	Preliminary Data Visualisation
2017-07-11	VRPM	Visualizing Risk Prediction Models
2017-07-10	AutoDeskR	An Interface to the 'AutoDesk' 'API' Platform
2017-07-10	dGAselID	Genetic Algorithm with Incomplete Dominance for Feature Selection
2017-07-10	ecr	Evolutionary Computation in R
2017-07-10	enviGCMS	GC/LC-MS Data Analysis for Environmental Science
2017-07-10	Formula	Extended Model Formulas
2017-07-10	FUNLDA	Genomic Latent Dirichlet Allocation
2017-07-10	island	Stochastic Island Biogeography Theory Made Easy
2017-07-10	KRLS	Kernel-Based Regularized Least Squares
2017-07-10	MitISEM	Mixture of Student t Distributions using Importance Sampling and Expectation Maximization
2017-07-10	netcom	Dynamic Network Alignment
2017-07-10	OAIHarvester	Harvest Metadata Using OAI-PMH Version 2.0
2017-07-10	oompaData	Data to Illustrate OOMPA Algorithms
2017-07-10	pkr	Pharmacokinetics in R
2017-07-10	PoloniexR	Interface to the Poloniex Cryptocurrency Trading API
2017-07-10	rvcheck	R/Package Version Check
2017-07-10	SFS	Similarity-First Search Seriation Algorithm
2017-07-10	varSelRF	Variable Selection using Random Forests
2017-07-10	wikilake	Scrape Lake Metadata Tables from Wikipedia
2017-07-09	Ckmeans.1d.dp	Optimal and Fast Univariate Clustering
2017-07-09	contfrac	Continued Fractions
2017-07-09	CRTgeeDR	Doubly Robust Inverse Probability Weighted Augmented GEE Estimator
2017-07-09	decomposedPSF	Time Series Prediction with PSF and Decomposition Methods (EMD and EEMD)
2017-07-09	fcm	Inference of Fuzzy Cognitive Maps (FCMs)
2017-07-09	gmnl	Multinomial Logit Models with Random Parameters
2017-07-09	lpdensity	Local Polynomial Density Estimation and Inference
2017-07-09	mthapower	Sample Size and Post-Hoc Power of Association Studies Involving Mitochondrial DNA Haplogroups
2017-07-09	postlightmercury	Parses Web Pages using Postlight Mercury
2017-07-08	fcuk	The Ultimate Helper for Clumsy Fingers
2017-07-08	ggplotgui	Create Ggplots via a Graphical User Interface
2017-07-08	GofKmt	Khmaladze Martingale Transformation Goodness-of-Fit Test
2017-07-08	l1kdeconv	Deconvolution for LINCS L1000 Data
2017-07-08	mixlink	Mixture Link Regression
2017-07-08	ScottKnottESD	The Scott-Knott Effect Size Difference (ESD) Test
2017-07-08	survHE	Survival Analysis in Health Economic Evaluation
2017-07-08	USAboundaries	Historical and Contemporary Boundaries of the United States of America
2017-07-08	waccR	Cost of Capital by Sector Data
2017-07-07	aphid	Analysis with Profile Hidden Markov Models
2017-07-07	BNPMediation	Bayesian Nonparametric Method for Mediation
2017-07-07	BrailleR	Improved Access for Blind Users
2017-07-07	clustvarsel	Variable Selection for Gaussian Model-Based Clustering
2017-07-07	HBP	Hi-C BED File Analysis Pipeline
2017-07-07	imagine	IMAGing engINE, Tools for Application of Image Filters to Data Matrices
2017-07-07	IMIFA	Fitting, Diagnostics, and Plotting Functions for Infinite Mixtures of Infinite Factor Analysers and Related Models
2017-07-07	jcolors	Colors Palettes for R and 'ggplot2', Additional Themes for 'ggplot2'
2017-07-07	LCMCR	Bayesian Non-Parametric Latent-Class Capture-Recapture
2017-07-07	partitions	Additive Partitions of Integers
2017-07-07	redlistr	Tools for the IUCN Red List of Ecosystems and Species
2017-07-07	SobolSequence	Sobol Sequences with Better Two-Dimensional Projections
2017-07-07	subniche	Within Outlying Mean Indexes: Refining the OMI Analysis
2017-07-07	textile	Textile Images
2017-07-06	Autoplotprotein	Development of Visualization Tools for Protein Sequence
2017-07-06	correlbinom	Correlated Binomial Probabilities
2017-07-06	emdi	Estimating and Mapping Disaggregated Indicators
2017-07-06	emil	Evaluation of Modeling without Information Leakage
2017-07-06	ETAS	Modeling Earthquake Data Using ETAS Model
2017-07-06	ggChernoff	Chernoff Faces for 'ggplot2'
2017-07-06	grpreg	Regularization Paths for Regression Models with Grouped Covariates
2017-07-06	gSeg	Graph-Based Change-Point Detection (g-Segmentation)
2017-07-06	hyper2	The Hyperdirichlet Distribution, Mark 2
2017-07-06	itcSegment	Individual Tree Crowns Segmentation
2017-07-06	mandelbrot	Generates Views on the Mandelbrot Set
2017-07-06	nleqslv	Solve Systems of Nonlinear Equations
2017-07-06	Robocoap	Generation of Dynamic Coappearance Matrices Within Texts
2017-07-06	statar	Tools Inspired by 'Stata' to Manipulate Tabular Data
2017-07-05	assocInd	Implements New and Existing Association Indices for Constructing Animal Social Networks
2017-07-05	awspack	Amazon Web Services Bundle Package
2017-07-05	bingat	Binary Graph Analysis Tools
2017-07-05	catSurv	Computerized Adaptive Testing for Survey Research
2017-07-05	coxphSGD	Stochastic Gradient Descent log-Likelihood Estimation in Cox Proportional Hazards Model
2017-07-05	HMPTrees	Statistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data
2017-07-05	IRISSeismic	Classes and Methods for Seismic Data Analysis
2017-07-05	landscapeR	Categorical Landscape Simulation Facility
2017-07-05	midas	Turn HTML 'Shiny'
2017-07-05	moko	Multi-Objective Kriging Optimization
2017-07-05	numGen	Number Series Generator
2017-07-05	prodest	Production Function Estimation
2017-07-05	sitree	Single Tree Simulator
2017-07-05	SuperGauss	Superfast Likelihood Inference for Stationary Gaussian Time Series
2017-07-05	treeplyr	'dplyr' Functionality for Matched Tree and Data Objects
2017-07-04	aws.cloudtrail	AWS CloudTrail Client Package
2017-07-04	aws.sns	AWS SNS Client Package
2017-07-04	aws.sqs	AWS SQS Client Package
2017-07-04	BayesBinMix	Bayesian Estimation of Mixtures of Multivariate Bernoulli Distributions
2017-07-04	cepR	Busca CEPs Brasileiros
2017-07-04	cleangeo	Cleaning Geometries from Spatial Objects
2017-07-04	cstab	Selection of Number of Clusters via Normalized Clustering Instability
2017-07-04	elhmc	Sampling from a Empirical Likelihood Bayesian Posterior of Parameters Using Hamiltonian Monte Carlo
2017-07-04	GameTheory	Cooperative Game Theory
2017-07-04	httpuv	HTTP and WebSocket Server Library
2017-07-04	knitcitations	Citations for 'Knitr' Markdown Files
2017-07-04	mcmcse	Monte Carlo Standard Errors for MCMC
2017-07-04	MDplot	Visualising Molecular Dynamics Analyses
2017-07-04	mrds	Mark-Recapture Distance Sampling
2017-07-04	plotSEMM	Graphing Nonlinear Relations Among Latent Variables from Structural Equation Mixture Models
2017-07-04	prereg	R Markdown Templates to Preregister Scientific Studies
2017-07-04	rintrojs	Wrapper for the 'Intro.js' Library
2017-07-04	rococo	Robust Rank Correlation Coefficient and Test
2017-07-04	shinyjqui	'jQuery UI' Interactions and Effects for Shiny
2017-07-04	SSM	Fit and Analyze Smooth Supersaturated Models
2017-07-04	wql	Exploring Water Quality Monitoring Data
2017-07-03	adeba	Adaptive Density Estimation by Bayesian Averaging
2017-07-03	aurelius	Generates PFA Documents from R Code and Optionally Runs Them
2017-07-03	bcROCsurface	Bias-Corrected Methods for Estimating the ROC Surface of Continuous Diagnostic Tests
2017-07-03	blockmodeling	An R Package for Generalized and Classical Blockmodeling of Valued Networks
2017-07-03	CovSelHigh	Model-Free Covariate Selection in High Dimensions
2017-07-03	Distance	Distance Sampling Detection Function and Abundance Estimation
2017-07-03	dsm	Density Surface Modelling of Distance Sampling Data
2017-07-03	DSsim	Distance Sampling Simulations
2017-07-03	ecolottery	Coalescent-Based Simulation of Ecological Communities
2017-07-03	emuR	Main Package of the EMU Speech Database Management System
2017-07-03	mnis	Easy Downloading Capabilities for the Members' Name Information Service
2017-07-03	myTAI	Evolutionary Transcriptomics Analyses
2017-07-03	PopGenome	An Efficient Swiss Army Knife for Population Genomic Analyses
2017-07-03	RcmdrPlugin.BiclustGUI	'Rcmdr' Plug-in GUI for Biclustering
2017-07-03	sos	Search Contributed R Packages, Sort by Package
2017-07-03	virtualspecies	Generation of Virtual Species Distributions
2017-07-03	wavemulcor	Wavelet Routines for Global and Local Multiple Correlation
2017-07-02	autoBagging	Learning to Rank Bagging Workflows with Metalearning
2017-07-02	aws.lambda	AWS Lambda Client Package
2017-07-02	gdns	Tools to Work with Google DNS Over HTTPS API
2017-07-02	geoSpectral	Classes and Methods for Working with Spectral Data with Space-Time Attributes
2017-07-02	hurdlr	Zero-Inflated and Hurdle Modelling Using Bayesian Inference
2017-07-02	kgschart	KGS Rank Graph Parser
2017-07-02	quickregression	Quick Linear Regression
2017-07-02	rsoi	El Nino/Southern Oscillation (ENSO) and Related Climate Indices
2017-07-02	twang	Toolkit for Weighting and Analysis of Nonequivalent Groups
2017-07-01	aws.iam	AWS IAM Client Package
2017-07-01	aws.signature	Amazon Web Services Request Signatures
2017-07-01	bsam	Bayesian State-Space Models for Animal Movement
2017-07-01	chunked	Chunkwise Text-File Processing for 'dplyr'
2017-07-01	confidence	Confidence Estimation of Environmental State Classifications
2017-07-01	fence	Using Fence Methods for Model Selection
2017-07-01	hbdct	Hierarchical Bayesian Design for Clinical Trials
2017-07-01	Lock5Data	Datasets for "Statistics: UnLocking the Power of Data"
2017-07-01	MicroMacroMultilevel	Micro-Macro Multilevel Modeling
2017-07-01	SkyWatchr	Search and Download Satellite Imagery using the SkyWatch API
2017-06-30	aws.ec2metadata	Get EC2 Instance Metadata
2017-06-30	BiBitR	R Wrapper for Java Implementation of BiBit
2017-06-30	bibtex	Bibtex Parser
2017-06-30	hhh4contacts	Age-Structured Spatio-Temporal Models for Infectious Disease Counts
2017-06-30	mcPAFit	Estimating Preferential Attachment from a Single Network Snapshot by Markov Chain Monte Carlo
2017-06-30	metaviz	Rainforest Plots and Visual Funnel Plot Inference for Meta-Analysis
2017-06-30	multimark	Capture-Mark-Recapture Analysis using Multiple Non-Invasive Marks
2017-06-30	OpasnetUtils	Opasnet Modelling Environment Utility Functions
2017-06-30	osmplotr	Bespoke Images of 'OpenStreetMap' Data
2017-06-30	riskRegression	Risk Regression Models and Prediction Scores for Survival Analysis with Competing Risks
2017-06-30	scpm	An R Package for Spatial Smoothing
2017-06-30	shazam	Immunoglobulin Somatic Hypermutation Analysis
2017-06-30	StratifiedRF	Builds Trees by Sampling Variables in Groups
2017-06-30	tm.plugin.lexisnexis	Import Articles from 'LexisNexis' Using the 'tm' Text Mining Framework
2017-06-29	BradleyTerryScalable	Fits the Bradley-Terry Model to Potentially Large and Sparse Networks of Comparison Data
2017-06-29	brglm	Bias Reduction in Binomial-Response Generalized Linear Models
2017-06-29	catmap	Case-Control and TDT Meta-Analysis Package
2017-06-29	circular	Circular Statistics
2017-06-29	CondIndTests	Nonlinear Conditional Independence Tests
2017-06-29	eventstudies	Event Study Analysis
2017-06-29	gsloid	Global Sea Level and Oxygen Isotope Data
2017-06-29	kazaam	Tools for Tall Distributed Matrices
2017-06-29	Luminescence	Comprehensive Luminescence Dating Data Analysis
2017-06-29	My.stepwise	Stepwise Variable Selection Procedures for Regression Analysis
2017-06-29	OTUtable	North Temperate Lakes - Microbial Observatory 16S Time Series Data and Functions
2017-06-29	PBSmapping	Mapping Fisheries Data and Spatial Analysis Tools
2017-06-29	pinnacle.data	Market Odds Data from Pinnacle
2017-06-29	treethresh	Methods for Tree-Based Local Adaptive Thresholding
2017-06-28	assertable	Verbose Assertions for Tabular Data (Data.frames and Data.tables)
2017-06-28	dotwhisker	Dot-and-Whisker Plots of Regression Results
2017-06-28	EL2Surv	Empirical Likelihood (EL) for Comparing Two Survival Functions
2017-06-28	ExpRep	Experiment Repetitions
2017-06-28	ForecastFramework	A Basis for Modular Model Creation
2017-06-28	goldi	Gene Ontology Label Discernment and Identification
2017-06-28	ndjson	Wicked-Fast Streaming 'JSON' ('ndjson') Reader
2017-06-28	PoweR	Computation of Power and Level Tables for Hypothesis Tests
2017-06-28	ppcc	Probability Plot Correlation Coefficient Test
2017-06-28	psbcGroup	Penalized Parametric and Semiparametric Bayesian Survival Models with Shrinkage and Grouping Priors
2017-06-28	PSCBS	Analysis of Parent-Specific DNA Copy Numbers
2017-06-28	rkafka	Using Apache 'Kafka' Messaging Queue Through 'R'
2017-06-28	SFtools	Space Filling Based Tools for Data Mining
2017-06-28	sparsio	I/O Operations with Sparse Matrices
2017-06-28	sqldf	Manipulate R Data Frames Using SQL
2017-06-27	BAT	Biodiversity Assessment Tools
2017-06-27	BRugs	Interface to the 'OpenBUGS' MCMC Software
2017-06-27	FSTpackage	Unified Sequence-Based Association Tests Allowing for Multiple Functional Annotation Scores
2017-06-27	ghit	Lightweight GitHub Package Installer
2017-06-27	gmediation	Mediation Analysis for Multiple and Multi-Stage Mediators
2017-06-27	ICtest	Estimating and Testing the Number of Interesting Components in Linear Dimension Reduction
2017-06-27	JM	Joint Modeling of Longitudinal and Survival Data
2017-06-27	NCSampling	Nearest Centroid (NC) Sampling
2017-06-27	Opportunistic	Routing Distribution, Broadcasts, Transmissions and Receptions in an Opportunistic Network
2017-06-27	otrimle	Robust Model-Based Clustering
2017-06-27	pleio	Pleiotropy Test for Multiple Traits on a Genetic Marker
2017-06-27	rdiversity	Measurement and Partitioning of Similarity-Sensitive Biodiversity
2017-06-27	treeman	Phylogenetic Tree Manipulation Class and Methods
2017-06-26	BayesTwin	Bayesian Analysis of Item-Level Twin Data
2017-06-26	bigrquery	An Interface to Google's 'BigQuery' 'API'
2017-06-26	CRANsearcher	RStudio Addin for Searching Packages in CRAN Database Based on Keywords
2017-06-26	DepthProc	Statistical Depth Functions for Multivariate Analysis
2017-06-26	intRvals	Analysis of Time-Ordered Event Data with Missed Observations
2017-06-26	plater	Read, Tidy, and Display Data from Microtiter Plates
2017-06-26	pltesim	Simulate Probabilistic Long-Term Effects in Models with Temporal Dependence
2017-06-26	rattle.data	Rattle Datasets
2017-06-26	RLumShiny	'Shiny' Applications for the R Package 'Luminescence'
2017-06-26	sqlscore	Utilities for Generating SQL Queries from Model Objects
2017-06-26	twfy	Drive the API for TheyWorkForYou
2017-06-25	endorse	Bayesian Measurement Models for Analyzing Endorsement Experiments
2017-06-25	leaflet.esri	'ESRI' Bindings for the 'leaflet' Package
2017-06-25	leaflet.extras	Extra Functionality for 'leaflet' Package
2017-06-25	net.security	Security Standards Data Sets
2017-06-25	tidygenomics	Tidy Verbs for Dealing with Genomic Data Frames
2017-06-25	TPEA	A Novel Topology-Based Pathway Enrichment Analysis Approach
2017-06-25	usdm	Uncertainty Analysis for Species Distribution Models
2017-06-24	aSPU	Adaptive Sum of Powered Score Test
2017-06-24	ddpcr	Analysis and Visualization of Droplet Digital PCR in R and on the Web
2017-06-24	DZEXPM	Estimation and Prediction of Skewed Spatial Processes
2017-06-24	evaluate	Parsing and Evaluation Tools that Provide More Details than the Default
2017-06-24	ggExtra	Add Marginal Histograms to 'ggplot2', and More 'ggplot2' Enhancements
2017-06-24	micompr	Multivariate Independent Comparison of Observations
2017-06-24	MultiSkew	Measures, Tests and Removes Multivariate Skewness
2017-06-24	RPostgreSQL	R Interface to the 'PostgreSQL' Database System
2017-06-24	stacomirtools	'ODBC' Connection Class for Package stacomiR
2017-06-23	BCgee	Bias-Corrected Estimates for Generalized Linear Models for Dependent Data
2017-06-23	corset	Arbitrary Bounding of Series and Time Series Objects
2017-06-23	fsia	Import and Analysis of OMR Data from FormScanner
2017-06-23	imputeTestbench	Test Bench for the Comparison of Imputation Methods
2017-06-23	JumpTest	Financial Jump Detection
2017-06-23	m2r	Macaulay2 in R
2017-06-23	mljar	R API for MLJAR
2017-06-23	nlsrk	Runge-Kutta Solver for Function nls()
2017-06-23	nmaINLA	Network Meta-Analysis using Integrated Nested Laplace Approximations
2017-06-23	nsROC	Non-Standard ROC Curve Analysis
2017-06-23	origami	Generalized Framework for Cross-Validation
2017-06-23	rem	Relational Event Models (REM)
2017-06-23	SCAT	Summary based Conditional Association Test
2017-06-23	spsann	Optimization of Sample Configurations using Spatial Simulated Annealing
2017-06-23	surv2sampleComp	Inference for Model-Free Between-Group Parameters for Censored Survival Data
2017-06-23	visreg	Visualization of Regression Models
2017-06-23	webutils	Utility Functions for Developing Web Applications
2017-06-23	WRTDStidal	Weighted Regression for Water Quality Evaluation in Tidal Waters
2017-06-22	IntegratedMRF	Integrated Prediction using Uni-Variate and Multivariate Random Forests
2017-06-22	metafor	Meta-Analysis Package for R
2017-06-22	MOQA	Basic Quality Data Assurance for Epidemiological Research
2017-06-22	nanotime	Nanosecond-Resolution Time for R
2017-06-22	rMouse	Automate Mouse Clicks and Send Keyboard Input
2017-06-22	rrcov3way	Robust Methods for Multiway Data Analysis, Applicable also for Compositional Data
2017-06-22	swapClass	A Null Model Adapted to Abundance Class Data in Ecology
2017-06-22	templates	A System for Working with Templates
2017-06-21	CFC	Cause-Specific Framework for Competing-Risk Analysis
2017-06-21	foreign	Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ...
2017-06-21	ftDK	A Wrapper for the API of the Danish Parliament
2017-06-21	hts	Hierarchical and Grouped Time Series
2017-06-21	LeArEst	Border and Area Estimation of Data Measured with Additive Error
2017-06-21	mpoly	Symbolic Computation and More with Multivariate Polynomials
2017-06-21	neotoma	Access to the Neotoma Paleoecological Database Through R
2017-06-21	rstream	Streams of Random Numbers
2017-06-21	sessioninfo	R Session Information
2017-06-20	anchoredDistr	Post-Processing for the Method of Anchored Distributions
2017-06-20	apaTables	Create American Psychological Association (APA) Style Tables
2017-06-20	congressbr	Downloads, Unpacks and Tidies Legislative Data from the Brazilian Federal Senate and Chamber of Deputies
2017-06-20	distillery	Method Functions for Confidence Intervals and to Distill Information from an Object
2017-06-20	mssqlR	MSSQL Querying using R
2017-06-20	POMaSPU	Adaptive Association Tests for Multiple Phenotypes using Proportional Odds Model (POM-aSPU)
2017-06-20	qdapTools	Tools for the 'qdap' Package
2017-06-20	rcoreoa	Client for the CORE API
2017-06-20	RcppCCTZ	'Rcpp' Bindings for the 'CCTZ' Library
2017-06-20	rematch2	Tidy Output from Regular Expression Matching
2017-06-20	rkafkajars	External Jars Required for Package 'rkafka'
2017-06-20	RLeafAngle	Estimates, Plots and Evaluates Leaf Angle Distribution Functions, Calculates Extinction Coefficients
2017-06-20	rpostgisLT	Managing Animal Movement Data with 'PostGIS' and R
2017-06-20	scape	Statistical Catch-at-Age Plotting Environment
2017-06-20	taxizedb	Tools for Working with 'Taxonomic' Databases
2017-06-20	tukeytrend	Tukeys Trend Test via Multiple Marginal Models
2017-06-20	ukbabynames	UK Baby Names Data
2017-06-20	WeightedCluster	Clustering of Weighted Data
2017-06-19	AICcmodavg	Model Selection and Multimodel Inference Based on (Q)AIC(c)
2017-06-19	clinPK	Clinical Pharmacokinetics Toolkit
2017-06-19	MAVE	Methods for Dimension Reduction
2017-06-19	namedCapture	Named Capture Regular Expressions
2017-06-19	PCovR	Principal Covariates Regression
2017-06-19	PeakError	Compute the Annotation Error of Peak Calls
2017-06-19	qte	Quantile Treatment Effects
2017-06-19	Rdroolsjars	Rdrools JARs
2017-06-19	ReinforcementLearning	Model-Free Reinforcement Learning
2017-06-19	RSQLite	'SQLite' Interface for R
2017-06-19	sciplot	Scientific Graphing Functions for Factorial Designs
2017-06-19	sfadv	Advanced Methods for Stochastic Frontier Analysis
2017-06-19	unvotes	United Nations General Assembly Voting Data
2017-06-18	DBI	R Database Interface
2017-06-18	forecastSNSTS	Forecasting for Stationary and Non-Stationary Time Series
2017-06-18	mvSLOUCH	Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses
2017-06-18	processmonitR	Building Process Monitoring Dashboards
2017-06-18	statmod	Statistical Modeling
2017-06-18	worms	Retriving Aphia Information from World Register of Marine Species
2017-06-17	bindrcpp	An 'Rcpp' Interface to Active Bindings
2017-06-17	blob	A Simple S3 Class for Representing Vectors of Binary Data ('BLOBS')
2017-06-17	ECFsup	Equal Covariance Functions Testing by L2-Norm and Sup-Norm
2017-06-17	R6	Classes with Reference Semantics
2017-06-17	RSQLServer	SQL Server R Database Interface (DBI) and 'dplyr' SQL Backend
2017-06-17	secret	Share Sensitive Information in R Packages
2017-06-17	snowFT	Fault Tolerant Simple Network of Workstations
2017-06-17	xpose4	Tools for Nonlinear Mixed-Effect Model Building and Diagnostics
2017-06-16	charlatan	Make Fake Data
2017-06-16	CityWaterBalance	Track Flows of Water Through an Urban System
2017-06-16	eiCompare	Compares EI, Goodman, RxC Estimates
2017-06-16	MARX	Simulation, Estimation and Selection of MARX Models
2017-06-16	phenopix	Process Digital Images of a Vegetation Cover
2017-06-16	pipe.design	Dual-Agent Dose Escalation for Phase I Trials using the PIPE Design
2017-06-15	assignPOP	Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework
2017-06-15	baseballDBR	Sabermetrics and Advanced Baseball Statistics
2017-06-15	dataverse	Client for Dataverse 4 Repositories
2017-06-15	dma	Dynamic Model Averaging
2017-06-15	GeoRange	Calculating Geographic Range from Occurrence Data
2017-06-15	mccr	The Matthews Correlation Coefficient
2017-06-15	MultiABEL	Multi-Trait Genome-Wide Association Analysis
2017-06-15	nneo	'NEON' 'API' Client
2017-06-15	overlapping	Estimation of Overlapping in Empirical Distributions
2017-06-15	pleiades	Interface to the 'Pleiades' 'Archeological' Database
2017-06-15	TANDEM	A Two-Stage Approach to Maximize Interpretability of Drug Response Models Based on Multiple Molecular Data Types
2017-06-15	tractor.base	Read, Manipulate and Visualise Magnetic Resonance Images
2017-06-15	zooaRchGUI	Interactive Analytical Tools for Zooarchaeological Data
2017-06-14	analytics	Regression Outlier Detection, Stationary Bootstrap, Testing Weak Stationarity, and Other Tools for Data Analysis
2017-06-14	astrochron	A Computational Tool for Astrochronology
2017-06-14	aws.s3	AWS S3 Client Package
2017-06-14	base64url	Fast and URL-Safe Base64 Encoder and Decoder
2017-06-14	flacco	Feature-Based Landscape Analysis of Continuous and Constrained Optimization Problems
2017-06-14	gmm	Generalized Method of Moments and Generalized Empirical Likelihood
2017-06-14	nauf	Regression with NA Values in Unordered Factors
2017-06-14	nscprepr	Prepares and Writes Files to Submit to the National Student Clearinghouse
2017-06-14	phantom	Gene Set Pareto Heterogeneity Analysis of Time-Course Gene Expression Data
2017-06-14	phylogram	Dendrograms for Evolutionary Analysis
2017-06-14	redR	REgularization by Denoising (RED)
2017-06-14	rspa	Adapt Numerical Records to Fit (in)Equality Restrictions
2017-06-14	satscanMapper	'SaTScan' (TM) Results Mapper
2017-06-14	shinydashboard	Create Dashboards with 'Shiny'
2017-06-14	ZIBseq	Differential Abundance Analysis for Metagenomic Data via Zero-Inflated Beta Regression
2017-06-13	cmna	Computational Methods for Numerical Analysis
2017-06-13	ConR	Computation of Parameters Used in Preliminary Assessment of Conservation Status
2017-06-13	d3Tree	Create Interactive Collapsible Trees with the JavaScript 'D3' Library
2017-06-13	gamesGA	Genetic Algorithm for Sequential Symmetric Games
2017-06-13	imputeTS	Time Series Missing Value Imputation
2017-06-13	meshsimp	Simplification of Surface Triangular Meshes with Associated Distributed Data
2017-06-13	MfUSampler	Multivariate-from-Univariate (MfU) MCMC Sampler
2017-06-13	muRL	Mailmerge using R, LaTeX, and the Web
2017-06-13	tropr	TV Tropes Statistics
2017-06-13	UNF	Tools for Creating Universal Numeric Fingerprints for Data
2017-06-12	argon2	Secure Password Hashing
2017-06-12	ClusterBootstrap	Analyze Clustered Data with Generalized Linear Models using the Cluster Bootstrap
2017-06-12	FAmle	Maximum Likelihood and Bayesian Estimation of Univariate Probability Distributions
2017-06-12	fastICA	FastICA Algorithms to Perform ICA and Projection Pursuit
2017-06-12	mix	Estimation/Multiple Imputation for Mixed Categorical and Continuous Data
2017-06-12	patternator	Feature Extraction from Female Brown Anole Lizard Dorsal Patterns
2017-06-12	polyapost	Simulating from the Polya Posterior
2017-06-12	pspline	Penalized Smoothing Splines
2017-06-12	qualV	Qualitative Validation Methods
2017-06-12	rcdd	Computational Geometry
2017-06-12	SanFranBeachWater	Downloads and Tidies the San Francisco Public Utilities Commission Beach Water Quality Monitoring Program Data
2017-06-12	standardize	Tools for Standardizing Variables for Regression in R
2017-06-12	tmcn	A Text Mining Toolkit for Chinese
2017-06-11	featurizer	Some Helper Functions that Help Create Features from Data
2017-06-11	orderstats	Efficiently Generates Random Order Statistic Variables
2017-06-11	pse	Parameter Space Exploration with Latin Hypercubes
2017-06-11	rcdklibs	The CDK Libraries Packaged for R
2017-06-10	cld2	Google's Compact Language Detector 2
2017-06-10	colorpatch	Optimized Rendering of Fold Changes and Confidence Values
2017-06-10	GIGrvg	Random Variate Generator for the GIG Distribution
2017-06-10	GPGame	Solving Complex Game Problems using Gaussian Processes
2017-06-10	janeaustenr	Jane Austen's Complete Novels
2017-06-10	pROC	Display and Analyze ROC Curves
2017-06-10	RNetLogo	Provides an Interface to the Agent-Based Modelling Platform 'NetLogo'
2017-06-10	soptdmaeA	Sequential Optimal Designs for Two-Colour cDNA Microarray Experiments
2017-06-09	permPATH	Permutation Based Gene Expression Pathway Analysis
2017-06-09	plfm	Probabilistic Latent Feature Analysis
2017-06-08	DLASSO	Implementation of Adaptive or Non-Adaptive Differentiable Lasso and SCAD Penalties in Linear Models
2017-06-08	frequencies	Create Frequency Tables with Counts and Rates
2017-06-08	gapfill	Fill Missing Values in Satellite Data
2017-06-08	getmstatistic	Quantifying Systematic Heterogeneity in Meta-Analysis
2017-06-08	kzfs	Multi-Scale Motions Separation with Kolmogorov-Zurbenko Periodogram Signals
2017-06-08	listWithDefaults	List with Defaults
2017-06-08	mapproj	Map Projections
2017-06-08	maps	Draw Geographical Maps
2017-06-08	milr	Multiple-Instance Logistic Regression with LASSO Penalty
2017-06-08	mixEMM	A Mixed-Effects Model for Analyzing Cluster-Level Non-Ignorable Missing Data
2017-06-08	msmtools	Building Augmented Data to Run Multi-State Models with 'msm' Package
2017-06-08	mvMORPH	Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data
2017-06-08	Risk	Computes 26 Financial Risk Measures for Any Continuous Distribution
2017-06-08	RSmartlyIO	Loading Facebook and Instagram Advertising Data from 'Smartly.io'
2017-06-08	sfsmisc	Utilities from 'Seminar fuer Statistik' ETH Zurich
2017-06-08	sidier	Substitution and Indel Distances to Infer Evolutionary Relationships
2017-06-08	Tinflex	A Universal Non-Uniform Random Number Generator
2017-06-08	xsp	The Chi-Square Periodogram
2017-06-07	clampSeg	Idealisation of Patch Clamp Recordings
2017-06-07	cld3	Google's Compact Language Detector 3
2017-06-07	gqlr	'GraphQL' Server in R
2017-06-07	hapsim	Haplotype Data Simulation
2017-06-07	HiCglmi	Probing Factor-Dependent Long-Range Contacts using Regression with Higher-Order Interaction Terms
2017-06-07	influence.ME	Tools for Detecting Influential Data in Mixed Effects Models
2017-06-07	iNOTE	Integrative Network Omnibus Total Effect Test
2017-06-07	kernplus	A Kernel Regression-Based Multidimensional Wind Turbine Power Curve
2017-06-07	SPEI	Calculation of the Standardised Precipitation-Evapotranspiration Index
2017-06-07	useful	A Collection of Handy, Useful Functions
2017-06-07	vortexR	Post Vortex Simulation Analysis
2017-06-07	ZeligChoice	Zelig Choice Models
2017-06-07	ZeligEI	Zelig Ecological Inference Models
2017-06-06	BAYESDEF	Bayesian Analysis of DSD
2017-06-06	bdlp	Transparent and Reproducible Artificial Data Generation
2017-06-06	covfefe	Covfefy Any Word, Sentence or Speech
2017-06-06	cquad	Conditional Maximum Likelihood for Quadratic Exponential Models for Binary Panel Data
2017-06-06	electionsBR	R Functions to Download and Clean Brazilian Electoral Data
2017-06-06	gamlssbssn	Bimodal Skew Symmetric Normal Distribution
2017-06-06	gdata	Various R Programming Tools for Data Manipulation
2017-06-06	geoknife	Web-Processing of Large Gridded Datasets
2017-06-06	gghalfnorm	Create a Half Normal Plot Using 'ggplot2'
2017-06-06	gquad	Prediction of G Quadruplexes and Other Non-B DNA Motifs
2017-06-06	gridGraphics	Redraw Base Graphics Using 'grid' Graphics
2017-06-06	HDCI	High Dimensional Confidence Interval Based on Lasso and Bootstrap
2017-06-06	iadf	Analysis of Intra Annual Density Fluctuations
2017-06-06	lintools	Manipulation of Linear Systems of (in)Equalities
2017-06-06	MultiLCIRT	Multidimensional Latent Class Item Response Theory Models
2017-06-06	nlstimedist	Non-Linear Model Fitting of Time Distribution of Biological Phenomena
2017-06-06	nomclust	Hierarchical Nominal Clustering Package
2017-06-06	piton	Parsing Expression Grammars in Rcpp
2017-06-06	PrevMap	Geostatistical Modelling of Spatially Referenced Prevalence Data
2017-06-06	pwrAB	Power Analysis for AB Testing
2017-06-06	randomNames	Function for Generating Random Names and a Dataset
2017-06-06	RISmed	Download Content from NCBI Databases
2017-06-06	rpst	Recursive Partitioning Survival Trees
2017-06-06	themetagenomics	Exploring Thematic Structure and Predicted Functionality of 16s rRNA Amplicon Data
2017-06-06	zetadiv	Functions to Compute Compositional Turnover Using Zeta Diversity
2017-06-06	zstdr	R Bindings to the 'Zstandard' Compression Library
2017-06-05	anytime	Anything to 'POSIXct' or 'Date' Converter
2017-06-05	capn	Capital Asset Pricing for Nature
2017-06-05	imaginator	Simulate General Insurance Policies and Losses
2017-06-05	minval	MINimal VALidation for Stoichiometric Reactions
2017-06-05	netassoc	Inference of Species Associations from Co-Occurrence Data
2017-06-05	Peptides	Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences
2017-06-05	pvclass	P-Values for Classification
2017-06-05	Rgbp	Hierarchical Modeling and Frequency Method Checking on Overdispersed Gaussian, Poisson, and Binomial Data
2017-06-04	edgar	Platform for EDGAR Filing Management
2017-06-03	ck37r	Chris Kennedy's R Toolkit
2017-06-03	colordistance	Distance Metrics for Image Color Similarity
2017-06-03	eesim	Simulate and Evaluate Time Series for Environmental Epidemiology
2017-06-03	glmertree	Generalized Linear Mixed Model Trees
2017-06-03	KRMM	Kernel Ridge Mixed Model
2017-06-03	NB.MClust	Negative Binomial Model-Based Clustering
2017-06-03	smcfcs	Multiple Imputation of Covariates by Substantive Model Compatible Fully Conditional Specification
2017-06-03	vistime	Pretty Timeline Creation
2017-06-02	CADFtest	A Package to Perform Covariate Augmented Dickey-Fuller Unit Root Tests
2017-06-02	deductive	Data Correction and Imputation Using Deductive Methods
2017-06-02	ECctmc	Simulation from Endpoint-Conditioned Continuous Time Markov Chains
2017-06-02	glmbb	All Hierarchical or Graphical Models for Generalized Linear Model
2017-06-02	hypersampleplan	Attribute Sampling Plan with Exact Hypergeometric Probabilities using Chebyshev Polynomials
2017-06-02	logOfGamma	Natural Logarithms of the Gamma Function for Large Values
2017-06-02	nearfar	Near-Far Matching
2017-06-02	PHENIX	Phenotypic Integration Index
2017-06-02	ratelimitr	Rate Limiting for R
2017-06-02	rpms	Recursive Partitioning for Modeling Survey Data
2017-06-02	spdplyr	Data Manipulation Verbs for the Spatial Classes
2017-06-02	webglobe	3D Interactive Globes
2017-06-01	CARBayes	Spatial Generalised Linear Mixed Models for Areal Unit Data
2017-06-01	jsonlite	A Robust, High Performance JSON Parser and Generator for R
2017-06-01	kerasR	R Interface to the Keras Deep Learning Library
2017-06-01	libstableR	Fast and Accurate Evaluation, Random Number Generation and Parameter Estimation of Skew Stable Distributions
2017-06-01	popsom	Functions for Constructing and Evaluating Self-Organizing Maps
2017-06-01	QPBoot	Model Validation using Quantile Spectral Analysis and Parametric Bootstrap
2017-06-01	qtlcharts	Interactive Graphics for QTL Experiments
2017-06-01	SCRT	Single-Case Randomization Tests
2017-06-01	SCVA	Single-Case Visual Analysis
2017-06-01	Tmisc	Turner Miscellaneous
2017-05-31	baitmet	Library Driven Compound Profiling in Gas Chromatography - Mass Spectrometry Data
2017-05-31	bamdit	Bayesian Meta-Analysis of Diagnostic Test Data
2017-05-31	btf	Estimates Univariate Function via Bayesian Trend Filtering
2017-05-31	difconet	Differential Coexpressed Networks
2017-05-31	ElastH	Replicar metodologia de SPE/MF para calculo de elasticidade de receita
2017-05-31	FDboost	Boosting Functional Regression Models
2017-05-31	genpathmox	Generalized Pathmox Approach Segmentation Tree Analysis
2017-05-31	ids	Generate Random Identifiers
2017-05-31	ImaginR	Delimit and Characterize Color Phenotype of the Pearl Oyster
2017-05-31	kernDeepStackNet	Kernel Deep Stacking Networks
2017-05-31	logistic4p	Logistic Regression with Misclassification in Dependent Variables
2017-05-31	pencopulaCond	Estimating Non-Simplified Vine Copulas Using Penalized Splines
2017-05-31	rangeBuilder	Occurrence Filtering, Geographic and Taxonomic Standardization and Generation of Species Range Polygons
2017-05-30	cocoreg	Extract Shared Variation in Collections of Data Sets Using Regression Models
2017-05-30	CpGassoc	Association Between Methylation and a Phenotype of Interest
2017-05-30	dtangle	Cell Type Deconvolution from Gene Expressions
2017-05-30	forestFloor	Visualizes Random Forests with Feature Contributions
2017-05-30	HIBPwned	Bindings for the 'HaveIBeenPwned.com' Data Breach API
2017-05-30	loder	Dependency-Free Access to PNG Image Files
2017-05-30	mdpeer	Graph-Constrained Regression with Enhanced Regularization Parameters Selection
2017-05-30	SIDES	Subgroup Identification Based on Differential Effect Search
2017-05-30	sisVIVE	Some Invalid Some Valid Instrumental Variables Estimator
2017-05-30	VarReg	Semi-Parametric Variance Regression
2017-05-29	classiFunc	Classification of Functional Data
2017-05-29	clustrd	Methods for Joint Dimension Reduction and Clustering
2017-05-29	CodeDepends	Analysis of R Code for Reproducible Research and Code Comprehension
2017-05-29	DDM	Death Registration Coverage Estimation
2017-05-29	dfCompare	Compare Two Dataframes and Return Adds, Changes, and Deletes
2017-05-29	lcmm	Extended Mixed Models Using Latent Classes and Latent Processes
2017-05-29	multivator	A Multivariate Emulator
2017-05-29	MVR	Mean-Variance Regularization
2017-05-29	phenex	Auxiliary Functions for Phenological Data Analysis
2017-05-29	phrasemachine	Simple Phrase Extraction
2017-05-29	powerCompRisk	Power Analysis Tool for Joint Testing Hazards with Competing Risks Data
2017-05-29	RGoogleFit	R Interface to Google Fit API
2017-05-29	rLTP	R Interface to the 'LTP'-Cloud Service
2017-05-29	robumeta	Robust Variance Meta-Regression
2017-05-29	shiny.semantic	Semantic UI Support for Shiny
2017-05-29	sodavis	SODA: Main and Interaction Effects Selection for Logistic Regression, Quadratic Discriminant and General Index Models
2017-05-29	squash	Color-Based Plots for Multivariate Visualization
2017-05-28	BEST	Bayesian Estimation Supersedes the t-Test
2017-05-28	Boom	Bayesian Object Oriented Modeling
2017-05-28	BoomSpikeSlab	MCMC for Spike and Slab Regression
2017-05-28	bsts	Bayesian Structural Time Series
2017-05-28	here	A Simpler Way to Find Your Files
2017-05-28	SmartSVA	Fast and Robust Surrogate Variable Analysis
2017-05-28	SocialMediaLab	Tools for Collecting Social Media Data and Generating Networks for Analysis
2017-05-27	didrooRFM	Compute Recency Frequency Monetary Scores for your Customer Data
2017-05-27	MIICD	Multiple Imputation for Interval Censored Data
2017-05-27	overlap	Estimates of Coefficient of Overlapping for Animal Activity Patterns
2017-05-27	polypoly	Helper Functions for Orthogonal Polynomials
2017-05-27	SeerMapper	A Quick Way to Map U.S. Rates and Data of U. S. States, Counties, Census Tracts, or Seer Registries using 2000 and 2010 U. S. Census Boundaries
2017-05-27	stratvns	Optimal Stratification in Stratified Sampling Optimization Algorithm
2017-05-27	tablaxlsx	Write Formatted Tables in Excel Workbooks
2017-05-27	timedelay	Time Delay Estimation for Stochastic Time Series of Gravitationally Lensed Quasars
2017-05-27	tsoutliers	Detection of Outliers in Time Series
2017-05-26	CharFun	Numerical Computation Cumulative Distribution Function and Probability Density Function from Characteristic Function
2017-05-26	icRSF	A Modified Random Survival Forest Algorithm
2017-05-26	knotR	Knot Diagrams using Bezier Curves
2017-05-26	ldbod	Local Density-Based Outlier Detection
2017-05-26	stratbr	Optimal Stratification in Stratified Sampling
2017-05-26	tictactoe	Tic-Tac-Toe Game
2017-05-25	amen	Additive and Multiplicative Effects Models for Networks and Relational Data
2017-05-25	apng	Convert Png Files into Animated Png
2017-05-25	biotools	Tools for Biometry and Applied Statistics in Agricultural Science
2017-05-25	eechidna	Exploring Election and Census Highly Informative Data Nationally for Australia
2017-05-25	RAMP	Regularized Generalized Linear Models with Interaction Effects
2017-05-25	rdoxygen	Create Doxygen Documentation for Source Code
2017-05-25	Rfacebook	Access to Facebook API via R
2017-05-25	soilphysics	Soil Physical Analysis
2017-05-25	spray	Sparse Arrays and Multivariate Polynomials
2017-05-25	timelineR	Visualization for Time Series Data
2017-05-25	TriadSim	Simulating Triad Genomewide Genotypes
2017-05-24	ARTP2	Pathway and Gene-Level Association Test
2017-05-24	lans2r	Work with Look at NanoSIMS Data in R
2017-05-24	sparseMVN	Multivariate Normal Functions for Sparse Covariance and Precision Matrices
2017-05-24	wally	The Wally Calibration Plot for Risk Prediction Models
2017-05-24	x.ent	eXtraction of ENTity
2017-05-23	BacArena	Modeling Framework for Cellular Communities in their Environments
2017-05-23	distances	Tools for Distance Metrics
2017-05-23	FLLat	Fused Lasso Latent Feature Model
2017-05-23	IRISMustangMetrics	Statistics and Metrics for Seismic Data
2017-05-23	LatticeKrig	Multiresolution Kriging Based on Markov Random Fields
2017-05-23	multisom	Clustering a Data Set using Multi-SOM Algorithm
2017-05-23	RHPCBenchmark	Benchmarks for High-Performance Computing Environments
2017-05-23	RNAstructureModuleMiner	RNA Secondary Structure Comparison and Module Mining
2017-05-23	ROI.models.miplib	R Optimization Infrastructure: 'MIPLIB' 2010 Benchmark Instances
2017-05-23	rpatrec	Recognising Visual Charting Patterns in Time Series Data
2017-05-23	samplingbook	Survey Sampling Procedures
2017-05-23	SubVis	Visual Exploration of Protein Alignments Resulting from Multiple Substitution Matrices
2017-05-23	voxel	Mass-Univariate Voxelwise Analysis of Medical Imaging Data
2017-05-23	xLLiM	High Dimensional Locally-Linear Mapping
2017-05-22	carpenter	Build Common Tables of Summary Statistics for Reports
2017-05-22	DendroSync	A Set of Tools for Calculating Spatial Synchrony Between Tree-Ring Chronologies
2017-05-22	multicmp	Flexible Modeling of Multivariate Count Data via the Multivariate Conway-Maxwell-Poisson Distribution
2017-05-22	Rd2md	Markdown Reference Manuals
2017-05-22	readtext	Import and Handling for Plain and Formatted Text Files
2017-05-22	scclust	Size-Constrained Clustering
2017-05-22	sotu	United States Presidential State of the Union Addresses
2017-05-22	testit	A Simple Package for Testing R Packages
2017-05-21	clisymbols	Unicode Symbols at the R Prompt
2017-05-21	edfReader	Reading EDF(+) and BDF(+) Files
2017-05-21	GlobalOptions	Generate Functions to Get or Set Global Options
2017-05-21	IgorR	Read Binary Files Saved by 'Igor Pro' (Including 'Neuromatic' Data)
2017-05-21	NPMOD	Non Parametric Module
2017-05-21	penRvine	Flexible R-Vines Estimation Using Bivariate Penalized Splines
2017-05-21	plfMA	A GUI to View, Design and Export Various Graphs of Data
2017-05-21	RANN	Fast Nearest Neighbour Search (Wraps ANN Library) Using L2 Metric
2017-05-21	rngWELL	Toolbox for WELL Random Number Generators
2017-05-20	gfmR	Implements Group Fused Multinomial Regression
2017-05-20	mousetrap	Process and Analyze Mouse-Tracking Data
2017-05-20	quickmatch	Quick Generalized Full Matching
2017-05-20	schumaker	Schumaker Shape-Preserving Spline
2017-05-20	webmockr	Stubbing and Setting Expectations on 'HTTP' Requests
2017-05-19	AHMbook	Functions and Data for the Book 'Applied Hierarchical Modeling in Ecology'
2017-05-19	bgeva	Binary Generalized Extreme Value Additive Models
2017-05-19	CALF	Coarse Approximation Linear Function
2017-05-19	CATT	The Cochran-Armitage Trend Test
2017-05-19	checkarg	Check the Basic Validity of a (Function) Argument
2017-05-19	covRobust	Robust Covariance Estimation via Nearest Neighbor Cleaning
2017-05-19	ipdw	Spatial Interpolation by Inverse Path Distance Weighting
2017-05-19	kdevine	Multivariate Kernel Density Estimation with Vine Copulas
2017-05-19	MIIVsem	Model Implied Instrumental Variable (MIIV) Estimation of Structural Equation Models
2017-05-19	nabor	Wraps 'libnabo', a Fast K Nearest Neighbour Library for Low Dimensions
2017-05-19	numKM	Create a Kaplan-Meier Plot with Numbers at Risk
2017-05-19	poisbinom	A Faster Implementation of the Poisson-Binomial Distribution
2017-05-19	printr	Automatically Print R Objects to Appropriate Formats According to the 'knitr' Output Format
2017-05-19	reportReg	An Easy Way to Report Regression Analysis
2017-05-19	simputation	Simple Imputation
2017-05-19	stepR	Multiscale Change-Point Inference
2017-05-18	afc	Generalized Discrimination Score
2017-05-18	AR	Another Look at the Acceptance-Rejection Method
2017-05-18	complexplus	Functions of Complex or Real Variable
2017-05-18	designmatch	Matched Samples that are Balanced and Representative by Design
2017-05-18	flexrsurv	Flexible Relative Survival Analysis
2017-05-18	GESE	Gene-Based Segregation Test
2017-05-18	GSED	Group Sequential Enrichment Design
2017-05-18	GUIgems	Graphical User Interface for Generalized Multistate Simulation Model
2017-05-18	mixKernel	Omics Data Integration Using Kernel Methods
2017-05-18	numOSL	Numeric Routines for Optically Stimulated Luminescence Dating
2017-05-18	powerplus	Exponentiation Operations
2017-05-18	REDCapR	Interaction Between R and REDCap
2017-05-18	Rglpk	R/GNU Linear Programming Kit Interface
2017-05-18	rmdformats	HTML Output Formats and Templates for 'rmarkdown' Documents
2017-05-18	SSRMST	Sample Size Calculation using Restricted Mean Survival Time
2017-05-18	uncmbb	UNC Men's Basketball Match Results Since 1949-1950 Season
2017-05-18	wCorr	Weighted Correlations
2017-05-17	easyNCDF	Tools to Easily Read/Write NetCDF Files into/from Multidimensional R Arrays
2017-05-17	ROI.plugin.ipop	ROI Plug-in {ipop}
2017-05-17	ROI.plugin.quadprog	ROI Plug-in {quadprog}
2017-05-17	ROI.plugin.symphony	ROI Plug-in SYMPHONY
2017-05-17	SemiParSampleSel	Semi-Parametric Sample Selection Modelling with Continuous or Discrete Response
2017-05-17	zeligverse	Easily Install and Load Stable Zelig Packages
2017-05-16	distcomp	Computations over Distributed Data without Aggregation
2017-05-16	dtwSat	Time-Weighted Dynamic Time Warping for Satellite Image Time Series Analysis
2017-05-16	ExcessMass	Excess Mass Calculation and Plots
2017-05-16	FatTailsR	Kiener Distributions and Fat Tails in Finance
2017-05-16	fmsb	Functions for Medical Statistics Book with some Demographic Data
2017-05-16	geoparser	Interface to the Geoparser.io API for Identifying and Disambiguating Places Mentioned in Text
2017-05-16	monkeylearn	Accesses the Monkeylearn API for Text Classifiers and Extractors
2017-05-16	MultiPhen	A Package to Test for Pleiotropic Effects
2017-05-16	PROscorer	Functions to Score Commonly-Used Patient-Reported Outcome (PRO) Measures and Other Psychometric Instruments
2017-05-16	readr	Read Rectangular Text Data
2017-05-16	rif	Client for 'Neuroscience' Information Framework 'APIs'
2017-05-16	ROpenDota	Access OpenDota Services in R
2017-05-16	rqPen	Penalized Quantile Regression
2017-05-16	rticles	Article Formats for R Markdown
2017-05-16	sotkanet	Sotkanet Open Data Access and Analysis
2017-05-15	coreSim	Core Functionality for Simulating Quantities of Interest from Generalised Linear Models
2017-05-15	fourierin	Computes Numeric Fourier Integrals
2017-05-15	HURDAT	Hurricane Re-Analysis Project
2017-05-15	issueReporter	Create Reports from GitHub Issues
2017-05-15	PairwiseD	Pairing Up Units and Vectors in Panel Data Setting
2017-05-15	PROscorerTools	Tools to Score Patient-Reported Outcome (PRO) and Other Psychometric Measures
2017-05-15	RBPcurve	The Residual-Based Predictiveness Curve
2017-05-15	redux	R Bindings to 'hiredis'
2017-05-15	rrepast	Invoke 'Repast Simphony' Simulation Models
2017-05-15	simPH	Tools for Simulating and Plotting Quantities of Interest Estimated from Cox Proportional Hazards Models
2017-05-15	slim	Singular Linear Models for Longitudinal Data
2017-05-15	unmarked	Models for Data from Unmarked Animals
2017-05-14	anim.plots	Simple Animated Plots for R
2017-05-14	gomms	GLM-Based Ordination Method
2017-05-14	GSIF	Global Soil Information Facilities
2017-05-14	IPEC	Root Mean Square Curvature Calculation
2017-05-14	missDeaths	Simulating and Analyzing Time to Event Data in the Presence of Population Mortality
2017-05-14	pacman	Package Management Tool
2017-05-14	plotKML	Visualization of Spatial and Spatio-Temporal Objects in Google Earth
2017-05-14	QZ	Generalized Eigenvalues and QZ Decomposition
2017-05-13	GEEmediate	Mediation Analysis for Generalized Linear Models Using the Difference Method
2017-05-13	inflection	Finds the Inflection Point of a Curve
2017-05-13	learnrbook	Datasets for Aphalo's "Learn R" Book
2017-05-13	mbgraphic	Measure Based Graphic Selection
2017-05-13	purrrlyr	Tools at the Intersection of 'purrr' and 'dplyr'
2017-05-13	sudokuAlt	Tools for Making and Spoiling Sudoku Games
2017-05-12	BMA	Bayesian Model Averaging
2017-05-12	diffMeshGP	Multi-Fidelity Computer Experiments Using the Tuo-Wu-Yu Model
2017-05-12	EpistemicGameTheory	Constructing an Epistemic Model for the Games with Two Players
2017-05-12	fastTextR	An Interface to the 'fastText' Library
2017-05-12	freqweights	Working with Frequency Tables
2017-05-12	globe	Plot 2D and 3D Views of the Earth, Including Major Coastline
2017-05-12	iGSEA	Integrative Gene Set Enrichment Analysis Approaches
2017-05-12	jocre	Joint Confidence Regions
2017-05-12	lifelogr	Life Logging
2017-05-12	modelObj	A Model Object Framework for Regression Analysis
2017-05-12	PP	Person Parameter Estimation
2017-05-12	rdist	Calculate Pairwise Distances
2017-05-12	rel	Reliability Coefficients
2017-05-12	rerddap	General Purpose Client for 'ERDDAP' Servers
2017-05-12	rivernet	Read, Analyze and Plot River Networks
2017-05-12	shinycssloaders	Add CSS Loading Animations to 'shiny' Outputs
2017-05-12	sinib	Sum of Independent Non-Identical Binomial Random Variables
2017-05-12	usedist	Distance Matrix Utilities
2017-05-11	arulesSequences	Mining Frequent Sequences
2017-05-11	BGData	A Suite of Packages for Analysis of Big Genomic Data
2017-05-11	cba	Clustering for Business Analytics
2017-05-11	EMP	Expected Maximum Profit Classification Performance Measure
2017-05-11	iECAT	Integrating External Controls into Association Test
2017-05-11	lhmixr	Fit Sex-Specific Life History Models with Missing Classifications
2017-05-11	pawls	Penalized Adaptive Weighted Least Squares Regression
2017-05-11	RGCCA	Regularized and Sparse Generalized Canonical Correlation Analysis for Multiblock Data
2017-05-11	smacof	Multidimensional Scaling
2017-05-11	TransModel	Fit Linear Transformation Models for Right Censored Data
2017-05-11	WebGestaltR	The R Version of WebGestalt
2017-05-10	bnnSurvival	Bagged k-Nearest Neighbors Survival Prediction
2017-05-10	CADStat	Provides a GUI to Several Statistical Methods
2017-05-10	daff	Diff, Patch and Merge for Data.frames
2017-05-10	gastempt	Analyzing Gastric Emptying from MRI or Scintigraphy
2017-05-10	hoardr	Manage Cached Files
2017-05-10	lindia	Automated Linear Regression Diagnostic
2017-05-10	lmmot	Multiple Ordinal Tobit (MOT) Model
2017-05-10	lsasim	Functions to Facilitate the Simulation of Large Scale Assessment Data
2017-05-10	manifestoR	Access and Process Data and Documents of the Manifesto Project
2017-05-10	nephro	Utilities for Nephrology
2017-05-10	optband	'surv' Object Confidence Bands Optimized by Area
2017-05-10	outbreaks	A Collection of Disease Outbreak Data
2017-05-10	qrsvm	SVM Quantile Regression with the Pinball Loss
2017-05-10	RootsExtremaInflections	Finds Roots, Extrema and Inflection Points of a Curve
2017-05-10	TSdbi	Time Series Database Interface
2017-05-10	TSsql	Generic SQL Helper Functions for 'TSdbi' SQL Plugins
2017-05-10	varhandle	Functions for Robust Variable Handling
2017-05-09	AcuityView	A Package for Displaying Visual Scenes as They May Appear to an Animal with Lower Acuity
2017-05-09	bmixture	Bayesian Estimation for Finite Mixture of Distributions
2017-05-09	comf	Functions for Thermal Comfort Research
2017-05-09	DIFlasso	A Penalty Approach to Differential Item Functioning in Rasch Models
2017-05-09	plotprotein	Development of Visualization Tools for Protein Sequence
2017-05-09	rtide	Tide Heights
2017-05-09	sourceR	Fits a Non-Parametric Bayesian Source Attribution Model
2017-05-09	TestFunctions	Test Functions for Simulation Experiments and Evaluating Optimization and Emulation Algorithms
2017-05-09	yhatr	R Binder for the Yhat API
2017-05-08	bit64	A S3 Class for Vectors of 64bit Integers
2017-05-08	clustMD	Model Based Clustering for Mixed Data
2017-05-08	datasauRus	Datasets from the Datasaurus Dozen
2017-05-08	eemR	Tools for Pre-Processing Emission-Excitation-Matrix (EEM) Fluorescence Data
2017-05-08	IndianTaxCalc	Indian Income Tax Calculator
2017-05-08	MaxSkew	Orthogonal Data Projections with Maximal Skewness
2017-05-08	philentropy	Similarity and Distance Quantification Between Probability Functions
2017-05-08	RPEXE.RPEXT	Reduced Piecewise Exponential Estimate/Test Software
2017-05-08	saeSim	Simulation Tools for Small Area Estimation
2017-05-08	symDMatrix	Partitioned Symmetric Matrices
2017-05-07	ACEt	Estimating Dynamic Heritability and Twin Model Comparison
2017-05-07	aoos	Another Object Orientation System
2017-05-07	beanz	Bayesian Analysis of Heterogeneous Treatment Effect
2017-05-07	BEDMatrix	Extract Genotypes from a PLINK .bed File
2017-05-07	biclique	Maximal Biclique Enumeration in Bipartite Graphs
2017-05-07	bife	Binary Choice Models with Fixed Effects
2017-05-07	chi	The Chi Distribution
2017-05-07	corrgram	Plot a Correlogram
2017-05-07	googlesheets	Manage Google Spreadsheets from R
2017-05-07	icesSAG	Stock Assessment Graphs Database Web Services
2017-05-07	invgamma	The Inverse Gamma Distribution
2017-05-06	efreadr	Read European Eddy Fluxes CSV Files
2017-05-06	glmmLasso	Variable Selection for Generalized Linear Mixed Models by L1-Penalized Estimation
2017-05-06	PROreg	Patient Reported Outcomes Regression Analysis
2017-05-06	pwr2	Power and Sample Size Analysis for One-way and Two-way ANOVA Models
2017-05-06	rnoaa	'NOAA' Weather Data from R
2017-05-06	VarfromPDB	Disease-Gene-Variant Relations Mining from the Public Databases and Literature
2017-05-05	BHMSMAfMRI	Bayesian Hierarchical Multi-Subject Multiscale Analysis of Functional MRI Data
2017-05-05	capm	Companion Animal Population Management
2017-05-05	cowbell	Performs Segmented Linear Regression on Two Independent Variables
2017-05-05	crunchy	Shiny Apps on Crunch
2017-05-05	expint	Exponential Integral and Incomplete Gamma Function
2017-05-05	gamboostLSS	Boosting Methods for 'GAMLSS'
2017-05-05	logbin	Relative Risk Regression Using the Log-Binomial Model
2017-05-05	OneR	One Rule Machine Learning Classification Algorithm with Enhancements
2017-05-05	portes	Portmanteau Tests for Univariate and Multivariate Time Series Models
2017-05-05	readstata13	Import 'Stata' Data Files
2017-05-05	RInside	C++ Classes to Embed R in C++ Applications
2017-05-05	RODBC	ODBC Database Access
2017-05-05	seqminer	Efficiently Read Sequence Data (VCF Format, BCF Format and METAL Format) into R
2017-05-04	biglasso	Extending Lasso Model Fitting to Big Data
2017-05-04	compHclust	Complementary Hierarchical Clustering
2017-05-04	ContourFunctions	Create Contour Plots from Data or a Function
2017-05-04	DataGraph	Export Data from R so DataGraph can Read it
2017-05-04	dimRed	A Framework for Dimensionality Reduction
2017-05-04	EdSurvey	Education Survey
2017-05-04	idar	Individual Diversity-Area Relationships
2017-05-04	LDcorSV	Linkage Disequilibrium Corrected by the Structure and the Relatedness
2017-05-04	PBD	Protracted Birth-Death Model of Diversification
2017-05-04	REAT	Regional Economic Analysis Toolbox
2017-05-04	seasonalview	Graphical User Interface for Seasonal Adjustment
2017-05-04	TideHarmonics	Harmonic Analysis of Tides
2017-05-04	x13binary	Provide the 'x13ashtml' Seasonal Adjustment Binary
2017-05-03	COMPoissonReg	Conway-Maxwell Poisson (COM-Poisson) Regression
2017-05-03	Corbi	Collection of Rudimentary Bioinformatics Tools
2017-05-03	CorReg	Linear Regression Based on Linear Structure Between Variables
2017-05-03	datetime	Nominal Dates, Times, and Durations
2017-05-03	glmmML	Generalized Linear Models with Clustering
2017-05-03	kmcudaR	'Yinyang' K-Means and K-NN using NVIDIA CUDA
2017-05-03	m2b	Movement to Behaviour Inference using Random Forest
2017-05-03	matrixpls	Matrix-Based Partial Least Squares Estimation
2017-05-03	pegas	Population and Evolutionary Genetics Analysis System
2017-05-03	proportion	Inference on Single Binomial Proportion and Bayesian Computations
2017-05-03	qrmix	Quantile Regression Mixture Models
2017-05-03	TcGSA	Time-Course Gene Set Analysis
2017-05-02	discord	Functions for Discordant Kinship Modeling
2017-05-02	dsrTest	Tests and Confidence Intervals on Directly Standardized Rates for Several Methods
2017-05-02	KSEAapp	Kinase-Substrate Enrichment Analysis
2017-05-02	mut	Pairwise Likelihood Ratios
2017-05-02	ncdump	Extract Metadata from 'NetCDF' Files as Data Frames
2017-05-02	onehot	Fast Onehot Encoding for Data.frames
2017-05-02	QoLR	Analysis of Health-Related Quality of Life in Oncology
2017-05-02	seasonal	R Interface to X-13-ARIMA-SEATS
2017-05-01	anacor	Simple and Canonical Correspondence Analysis
2017-05-01	angstroms	Tools for 'ROMS' the Regional Ocean Modeling System
2017-05-01	cfa	Configural Frequency Analysis (CFA)
2017-05-01	dhglm	Double Hierarchical Generalized Linear Models
2017-05-01	doMPI	Foreach Parallel Adaptor for the Rmpi Package
2017-05-01	EML	Read and Write Ecological Metadata Language Files
2017-05-01	excel.link	Convenient Data Exchange with Microsoft Excel
2017-05-01	fftw	Fast FFT and DCT Based on the FFTW Library
2017-05-01	fuzzr	Fuzz-Test R Functions
2017-05-01	ibr	Iterative Bias Reduction
2017-05-01	MHTmult	Multiple Hypotheses Testing for Multiple Families/Groups Structure
2017-05-01	MultivariateRandomForest	Models Multivariate Cases Using Random Forests
2017-05-01	nlsem	Fitting Structural Equation Mixture Models
2017-05-01	roll	Rolling Statistics
2017-05-01	virustotal	R Client for the VirusTotal API
2017-05-01	WRS2	A Collection of Robust Statistical Methods
2017-04-30	aws.alexa	Client for the Amazon Alexa Web Information Services API
2017-04-30	ClueR	Cluster Evaluation
2017-04-30	cubfits	Codon Usage Bias Fits
2017-04-30	DDRTree	Learning Principal Graphs with DDRTree
2017-04-30	DstarM	Analyze Two Choice Reaction Time Data with the D*M Method
2017-04-30	MetaboList	Annotation of Metabolites from Liquid Chromatography-Mass Spectrometry Data
2017-04-30	pafdR	Book Companion for Processing and Analyzing Financial Data with R
2017-04-30	rootWishart	Distribution of Largest Root for Single and Double Wishart Settings
2017-04-30	SPADAR	Spherical Projections of Astronomical Data
2017-04-29	antiword	Extract Text from Microsoft Word Documents
2017-04-29	ChocoLattes	Processing Data from Lattes CV Files
2017-04-29	dataseries	Switzerland's Data Series in One Place
2017-04-29	GADMTools	Easy Use of 'GADM' Shapefiles
2017-04-29	MixSim	Simulating Data to Study Performance of Clustering Algorithms
2017-04-29	mockr	Mocking in R
2017-04-29	parfm	Parametric Frailty Models
2017-04-29	pim	Fit Probabilistic Index Models
2017-04-29	radiant	Business Analytics using R and Shiny
2017-04-29	radiant.multivariate	Multivariate Menu for Radiant: Business Analytics using R and Shiny
2017-04-28	aRxiv	Interface to the arXiv API
2017-04-28	casebase	Fitting Flexible Smooth-in-Time Hazards and Risk Functions via Logistic and Multinomial Regression
2017-04-28	ConsRank	Compute the Median Ranking(s) According to the Kemeny's Axiomatic Approach
2017-04-28	cts	Continuous Time Autoregressive Models
2017-04-28	fetchR	Calculate Wind Fetch
2017-04-28	flexmix	Flexible Mixture Modeling
2017-04-28	gcmr	Gaussian Copula Marginal Regression
2017-04-28	gsrsb	Group Sequential Refined Secondary Boundary
2017-04-28	homomorpheR	Homomorphic Computations in R
2017-04-28	htmltools	Tools for HTML
2017-04-28	orsk	Converting Odds Ratio to Relative Risk in Cohort Studies with Partial Data Information
2017-04-28	PerMallows	Permutations and Mallows Distributions
2017-04-28	permDep	Permutation Tests for General Dependent Truncation
2017-04-28	radiant.model	Model Menu for Radiant: Business Analytics using R and Shiny
2017-04-28	roahd	Robust Analysis of High Dimensional Data
2017-04-28	SIBER	Stable Isotope Bayesian Ellipses in R
2017-04-28	TSdist	Distance Measures for Time Series Data
2017-04-28	waterData	Retrieval, Analysis, and Anomaly Calculation of Daily Hydrologic Time Series Data
2017-04-28	WikidataQueryServiceR	API Client Library for 'Wikidata Query Service'
2017-04-27	AdhereR	Adherence to Medications
2017-04-27	aSPC	An Adaptive Sum of Powered Correlation Test (aSPC) for Global Association Between Two Random Vectors
2017-04-27	bujar	Buckley-James Regression for Survival Data with High-Dimensional Covariates
2017-04-27	genie	A New, Fast, and Outlier Resistant Hierarchical Clustering Algorithm
2017-04-27	immer	Item Response Models for Multiple Ratings
2017-04-27	lm.br	Linear Model with Breakpoint
2017-04-27	msos	Data Sets and Functions Used in Multivariate Statistics: Old School by John Marden
2017-04-27	mstherm	Analyze MS/MS Protein Melting Data
2017-04-27	ncvreg	Regularization Paths for SCAD and MCP Penalized Regression Models
2017-04-27	NlcOptim	Solve Nonlinear Optimization with Nonlinear Constraints
2017-04-27	NonpModelCheck	Model Checking and Variable Selection in Nonparametric Regression
2017-04-27	radiant.basics	Basics Menu for Radiant: Business Analytics using R and Shiny
2017-04-27	radiant.design	Design Menu for Radiant: Business Analytics using R and Shiny
2017-04-27	robust	Port of the S+ "Robust Library"
2017-04-27	robustreg	Robust Regression Functions
2017-04-27	visualize	Graph Probability Distributions with User Supplied Parameters and Statistics
2017-04-26	bulletr	Algorithms for Matching Bullet Lands
2017-04-26	cIRT	Choice Item Response Theory
2017-04-26	coxphMIC	Sparse Estimation of Cox Proportional Hazards Models via Approximated Information Criterion
2017-04-26	dina	Bayesian Estimation of DINA Model
2017-04-26	fourPNO	Bayesian 4 Parameter Item Response Model
2017-04-26	htree	Historical Tree Ensembles for Longitudinal Data
2017-04-26	IBDsim	Simulation of Chromosomal Regions Shared by Family Members
2017-04-26	md.log	Produces Markdown Log File with a Built-in Function Call
2017-04-26	plink	IRT Separate Calibration Linking Methods
2017-04-26	rebird	R Client for the eBird Database of Bird Observations
2017-04-26	RSCABS	Rao-Scott Cochran-Armitage by Slices Trend Test
2017-04-26	rv	Simulation-Based Random Variable Objects
2017-04-26	splithalf	Calculate Task Split Half Reliability Estimates
2017-04-25	binomen	'Taxonomic' Specification and Parsing Methods
2017-04-25	censCov	Linear Regression with a Randomly Censored Covariate
2017-04-25	clinfun	Clinical Trial Design and Data Analysis Functions
2017-04-25	demography	Forecasting Mortality, Fertility, Migration and Population Data
2017-04-25	formatR	Format R Code Automatically
2017-04-25	ftsa	Functional Time Series Analysis
2017-04-25	gam	Generalized Additive Models
2017-04-25	gitlabr	Access to the Gitlab API
2017-04-25	lfl	Linguistic Fuzzy Logic
2017-04-25	partialCI	Partial Cointegration
2017-04-25	radiant.data	Data Menu for Radiant: Business Analytics using R and Shiny
2017-04-25	RandMeta	Efficient Numerical Algorithm for Exact Inference in Meta Analysis
2017-04-25	RcppTOML	'Rcpp' Bindings to Parser for Tom's Obvious Markup Language
2017-04-25	rebus	Build Regular Expressions in a Human Readable Way
2017-04-25	rebus.base	Core Functionality for the 'rebus' Package
2017-04-25	simest	Constrained Single Index Model Estimation
2017-04-25	subspaceMOA	Interface to 'subspaceMOA'
2017-04-25	V8	Embedded JavaScript Engine for R
2017-04-25	zip	Cross-Platform 'zip' Compression
2017-04-24	ajv	Another JSON Schema Validator
2017-04-24	BarBorGradient	Function Minimum Approximator
2017-04-24	ider	Various Methods for Estimating Intrinsic Dimension
2017-04-24	imager	Image Processing Library Based on 'CImg'
2017-04-24	lamW	Lambert-W Function
2017-04-24	nonpar	A Collection of Nonparametric Hypothesis Tests
2017-04-24	PGEE	Penalized Generalized Estimating Equations in High-Dimension
2017-04-24	ring	Circular / Ring Buffers
2017-04-24	selectapref	Analysis of Field and Laboratory Foraging
2017-04-24	sem	Structural Equation Models
2017-04-23	distrEx	Extensions of Package 'distr'
2017-04-23	MonteCarlo	Automatic Parallelized Monte Carlo Simulations
2017-04-23	npROCRegression	Kernel-Based Nonparametric ROC Regression Modelling
2017-04-23	plspm	Tools for Partial Least Squares Path Modeling (PLS-PM)
2017-04-23	PSF	Forecasting of Univariate Time Series Using the Pattern Sequence-Based Forecasting (PSF) Algorithm
2017-04-23	RandVar	Implementation of Random Variables
2017-04-23	RobAStBase	Robust Asymptotic Statistics
2017-04-23	ROptEst	Optimally Robust Estimation
2017-04-23	SparseM	Sparse Linear Algebra
2017-04-23	startupmsg	Utilities for Start-Up Messages
2017-04-22	deldir	Delaunay Triangulation and Dirichlet (Voronoi) Tessellation
2017-04-22	distr	Object Oriented Implementation of Distributions
2017-04-22	nat.templatebrains	NeuroAnatomy Toolbox ('nat') Extension for Handling Template Brains
2017-04-22	rdlocrand	Local Randomization Methods for RD Designs
2017-04-22	readBrukerFlexData	Reads Mass Spectrometry Data in Bruker *flex Format
2017-04-22	scatterplot3d	3D Scatter Plot
2017-04-22	startR	Automatically Retrieve Multidimensional Distributed Data Sets
2017-04-22	SweaveListingUtils	Utilities for Sweave Together with TeX 'listings' Package
2017-04-22	treatSens	Sensitivity Analysis for Causal Inference
2017-04-21	chemmodlab	A Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models
2017-04-21	crawl	Fit Continuous-Time Correlated Random Walk Models to Animal Movement Data
2017-04-21	CrossScreening	Cross-Screening in Observational Studies that Test Many Hypotheses
2017-04-21	DMRMark	DMR Detection by Non-Homogeneous Hidden Markov Model from Methylation Array Data
2017-04-21	dtplyr	Data Table Back-End for 'dplyr'
2017-04-21	installr	Using R to Install Stuff (Such As: R, 'Rtools', 'RStudio', 'Git', and More!)
2017-04-21	KENDL	Kernel-Smoothed Nonparametric Methods for Environmental Exposure Data Subject to Detection Limits
2017-04-21	memoise	Memoisation of Functions
2017-04-21	Morpho	Calculations and Visualisations Related to Geometric Morphometrics
2017-04-21	phylobase	Base Package for Phylogenetic Structures and Comparative Data
2017-04-21	PRROC	Precision-Recall and ROC Curves for Weighted and Unweighted Data
2017-04-21	regress	Gaussian Linear Models with Linear Covariance Structure
2017-04-21	Rgb	The R Genome Browser
2017-04-21	RpeakChrom	Tools for Chromatographic Column Characterization and Modelling Chromatographic Peak
2017-04-21	SADISA	Species Abundance Distributions with Independent-Species Assumption
2017-04-21	SGP	Student Growth Percentiles & Percentile Growth Trajectories
2017-04-21	simMP	Simulate Somatic Mutations in Cancer Genomes from Mutational Processes
2017-04-21	sinaplot	An Enhanced Chart for Simple and Truthful Representation of Single Observations over Multiple Classes
2017-04-21	spocc	Interface to Species Occurrence Data Sources
2017-04-21	statGraph	Statistical Methods for Graphs
2017-04-21	synbreed	Framework for the Analysis of Genomic Prediction Data using R
2017-04-21	unix	Unix System Utilities
2017-04-20	abctools	Tools for ABC Analyses
2017-04-20	BIOdry	Multilevel Modeling of Dendroclimatical Fluctuations
2017-04-20	gistr	Work with 'GitHub' 'Gists'
2017-04-20	LINselect	Selection of Linear Estimators
2017-04-20	LOST	Missing Morphometric Data Simulation and Estimation
2017-04-20	markdown	'Markdown' Rendering for R
2017-04-20	PortfolioOptim	Small/Large Sample Portfolio Optimization
2017-04-20	prcbench	Testing Workbench for Precision-Recall Curves
2017-04-20	prozor	Minimal Protein Set Explaining Peptide Spectrum Matches
2017-04-20	RCALI	Calculation of the Integrated Flow of Particles Between Polygons
2017-04-20	rpart.plot	Plot 'rpart' Models: An Enhanced Version of 'plot.rpart'
2017-04-20	validann	Validation Tools for Artificial Neural Networks
2017-04-20	WufooR	R Wrapper for the 'Wufoo.com' - The Form Building Service
2017-04-19	datacheckr	Data Checking
2017-04-19	DynNom	Dynamic Nomograms for Linear, Generalized Linear and Proportional Hazard Models
2017-04-19	paleomorph	Geometric Morphometric Tools for Paleobiology
2017-04-19	PCADSC	Tools for Principal Component Analysis-Based Data Structure Comparisons
2017-04-19	prediction	Tidy, Type-Safe 'prediction()' Methods
2017-04-19	rAltmetric	Retrieves Altmerics Data for Any Published Paper from 'Altmetric.com'
2017-04-19	rfishbase	R Interface to 'FishBase'
2017-04-19	ss3sim	Fisheries Stock Assessment Simulation Testing with Stock Synthesis
2017-04-19	yarrr	A Companion to the e-Book "YaRrr!: The Pirate's Guide to R"
2017-04-18	acnr	Annotated Copy-Number Regions
2017-04-18	cna	Causal Modeling with Coincidence Analysis
2017-04-18	icosa	Global Triangular and Penta-Hexagonal Grids Based on Tessellated Icosahedra
2017-04-18	lfactors	Factors with Levels
2017-04-18	longCatEDA	Package for Plotting Categorical Longitudinal and Time-Series Data
2017-04-18	partialAR	Partial Autoregression
2017-04-18	QICD	Estimate the Coefficients for Non-Convex Penalized Quantile Regression Model by using QICD Algorithm
2017-04-18	readxl	Read Excel Files
2017-04-18	Rpoppler	PDF Tools Based on Poppler
2017-04-18	SGCS	Spatial Graph Based Clustering Summaries for Spatial Point Patterns
2017-04-18	spatialsegregation	Segregation Measures for Multitype Spatial Point Patterns
2017-04-18	TSGSIS	Two Stage-Grouped Sure Independence Screening
2017-04-18	uqr	Unconditional Quantile Regression
2017-04-18	WLreg	Regression Analysis Based on Win Loss Endpoints
2017-04-17	convey	Income Concentration Analysis with Complex Survey Samples
2017-04-17	icamix	Estimation of ICA Mixture Models
2017-04-17	ifaTools	Toolkit for Item Factor Analysis with 'OpenMx'
2017-04-17	largeList	Serialization Interface for Large List Objects
2017-04-17	RandomFields	Simulation and Analysis of Random Fields
2017-04-16	choroplethr	Simplify the Creation of Choropleth Maps in R
2017-04-16	classInt	Choose Univariate Class Intervals
2017-04-16	curvHDR	Filtering of Flow Cytometry Samples
2017-04-16	forestmodel	Forest Plots from Regression Models
2017-04-16	idm	Incremental Decomposition Methods
2017-04-16	mcmc	Markov Chain Monte Carlo
2017-04-16	mro	Multiple Correlation
2017-04-16	rotationForest	Fit and Deploy Rotation Forest Models
2017-04-16	splancs	Spatial and Space-Time Point Pattern Analysis
2017-04-15	captr	Client for the Captricity API
2017-04-15	complexity	Calculate the Proportion of Permutations in Line with an Informative Hypothesis
2017-04-15	ConvergenceConcepts	Seeing Convergence Concepts in Action
2017-04-15	qtbase	Interface Between R and Qt
2017-04-15	tseriesEntropy	Entropy Based Analysis and Tests for Time Series
2017-04-14	babynames	US Baby Names 1880-2015
2017-04-14	bamlss	Bayesian Additive Models for Location Scale and Shape (and Beyond)
2017-04-14	bayesCL	Bayesian Inference on a GPU using OpenCL
2017-04-14	nortestARMA	Neyman Smooth Tests of Normality for the Errors of ARMA Models
2017-04-14	RandomFieldsUtils	Utilities for the Simulation and Analysis of Random Fields
2017-04-14	Rtsne	T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
2017-04-14	scidb	An R Interface to SciDB
2017-04-14	SeerMapper2010East	Supplemental U. S. 2010 Census Tract Boundaries for 23 Eastern States without Registries for 'SeerMapper'
2017-04-14	SeerMapper2010West	Supplemental U.S. 2010 Census Tract Boundaries for 14 Western States without Seer Registries for 'SeerMapper'
2017-04-14	StatPerMeCo	Statistical Performance Measures to Evaluate Covariance Matrix Estimates
2017-04-14	thankr	Find Out Who Maintains the Packages you Use
2017-04-13	DAISIE	Dynamical Assembly of Islands by Speciation, Immigration and Extinction
2017-04-13	fitbitScraper	Scrapes Data from Fitbit
2017-04-13	fpest	Estimating Finite Population Total
2017-04-13	GDINA	The Generalized DINA Model Framework
2017-04-13	influence.SEM	Case Influence in Structural Equation Models
2017-04-13	jug	A Simple Web Framework for R
2017-04-13	nopaco	Non-Parametric Concordance Coefficient
2017-04-13	ore	An R Interface to the Onigmo Regular Expression Library
2017-04-13	R2ucare	Goodness-of-Fit Tests for Capture-Recapture Models
2017-04-13	rags2ridges	Ridge Estimation of Precision Matrices from High-Dimensional Data
2017-04-13	SeerMapper2010Regs	Supplemental U. S. 2010 Census Tract Boundaries for 15 States with Seer Registries for 'SeerMapper'
2017-04-13	SGPdata	Exemplar Data Sets for SGP Analyses
2017-04-13	spec	A Data Specification Format and Interface
2017-04-13	StructFDR	False Discovery Control Procedure Integrating the Prior Structure Information
2017-04-13	Tnseq	Identification of Conditionally Essential Genes in Transposon Sequencing Studies
2017-04-13	tubern	R Client for the YouTube Analytics and Reporting API
2017-04-13	wrangle	A Systematic Data Wrangling Idiom
2017-04-12	abbyyR	Access to Abbyy Optical Character Recognition (OCR) API
2017-04-12	ANOM	Analysis of Means
2017-04-12	clarifai	Access to Clarifai API
2017-04-12	CompQuadForm	Distribution Function of Quadratic Forms in Normal Variables
2017-04-12	fullfact	Full Factorial Breeding Analysis
2017-04-12	lgcp	Log-Gaussian Cox Process
2017-04-12	marcher	Migration and Range Change Estimation in R
2017-04-12	optrcdmaeAT	Optimal Row-Column Designs for Two-Colour cDNA Microarray Experiments
2017-04-12	OSMscale	Add a Scale Bar to 'OpenStreetMap' Plots
2017-04-12	r.jive	Perform JIVE Decomposition for Multi-Source Data
2017-04-12	rbhl	Interface to the 'Biodiversity' 'Heritage' Library
2017-04-12	SeerMapperEast	Supplemental U. S. 2000 Census Tract Boundaries for 23 Eastern States without Seer Registries
2017-04-12	SeerMapperWest	Supplemental U.S. 2000 Census Tract Boundaries for 14 Western States without Seer Registries for 'SeerMapper'
2017-04-12	stddiff	Calculate the Standardized Difference for Numeric, Binary and Category Variables
2017-04-11	AcousticNDLCodeR	Coding Sound Files for Use with NDL
2017-04-11	assertthat	Easy Pre and Post Assertions
2017-04-11	easyDes	An Easy Way to Descriptive Analysis
2017-04-11	fastqcr	Quality Control of Sequencing Data
2017-04-11	GADAG	A Genetic Algorithm for Learning Directed Acyclic Graphs
2017-04-11	GLIDE	Global and Individual Tests for Direct Effects
2017-04-11	jsonld	JSON for Linking Data
2017-04-11	mapr	Visualize Species Occurrence Data
2017-04-11	RPANDA	Phylogenetic ANalyses of DiversificAtion
2017-04-11	strataG	Summaries and Population Structure Analyses of Genetic Data
2017-04-11	VIM	Visualization and Imputation of Missing Values
2017-04-10	BUCSS	Bias and Uncertainty Corrected Sample Size
2017-04-10	D3GB	Interactive Genome Browser with R
2017-04-10	doRNG	Generic Reproducible Parallel Backend for 'foreach' Loops
2017-04-10	lspline	Linear Splines with Convenient Parametrisations
2017-04-10	partools	Tools for the 'Parallel' Package
2017-04-10	rbison	Interface to the 'USGS' 'BISON' 'API'
2017-04-10	SeerMapperRegs	Supplemental U. S. 2000 Census Tract Boundary for 15 States with Seer Registries for 'SeerMapper'
2017-04-10	tlm	Effects under Linear, Logistic and Poisson Regression Models with Transformed Variables
2017-04-10	tuneR	Analysis of Music and Speech
2017-04-09	eLNNpaired	Model-Based Gene Clustering for Genomics Data from Paired/Matched Designs
2017-04-09	expands	Expanding Ploidy and Allele-Frequency on Nested Subpopulations
2017-04-09	Grace	Graph-Constrained Estimation and Hypothesis Tests
2017-04-09	gridsample	Tools for Grid-Based Survey Sampling Design
2017-04-09	mRchmadness	Numerical Tools for Filling Out an NCAA Basketball Tournament Bracket
2017-04-09	qdapRegex	Regular Expression Removal, Extraction, and Replacement Tools
2017-04-09	shinyFeedback	Displays User Feedback Next to Shiny Inputs
2017-04-09	simpleRCache	Simple R Cache
2017-04-09	skeletor	An R Package Skeleton Generator
2017-04-09	tpAUC	Estimation and Inference of Two-Way pAUC, pAUC and pODC
2017-04-08	directlabels	Direct Labels for Multicolor Plots
2017-04-07	beyondWhittle	Bayesian Spectral Inference for Stationary Time Series
2017-04-07	duckduckr	Simple Client for the DuckDuckGo Instant Answer API
2017-04-07	filehash	Simple Key-Value Database
2017-04-07	IMTest	Information Matrix Test for Generalized Partial Credit Models
2017-04-07	IRTShiny	Item Response Theory via Shiny
2017-04-07	lavaan.shiny	Latent Variable Analysis with Shiny
2017-04-07	MedDietCalc	Multi Calculator to Compute Scores of Adherence to Mediterranean Diet
2017-04-07	micEconIndex	Price and Quantity Indices
2017-04-07	psychomix	Psychometric Mixture Models
2017-04-07	reghelper	Helper Functions for Regression Analysis
2017-04-07	repr	Serializable Representations
2017-04-07	rosm	Plot Raster Map Tiles from Open Street Map and Other Sources
2017-04-07	secure	Sequential Co-Sparse Factor Regression
2017-04-07	sylcount	Syllable Counting and Readability Measurements
2017-04-07	TLMoments	Calculate TL-Moments and Convert Them to Distribution Parameters
2017-04-06	c212	Methods for Detecting Safety Signals in Clinical Trials Using Body-Systems (System Organ Classes)
2017-04-06	cffdrs	Canadian Forest Fire Danger Rating System
2017-04-06	classifierplots	Generates a Visualization of Classifier Performance as a Grid of Diagnostic Plots
2017-04-06	CoFRA	Complete Functional Regulation Analysis
2017-04-06	eshrink	Shrinkage for Effect Estimation
2017-04-06	fit.models	Compare Fitted Models
2017-04-06	ggedit	Interactive 'ggplot2' Layer and Theme Aesthetic Editor
2017-04-06	mmod	Modern Measures of Population Differentiation
2017-04-06	zfa	Zoom-Focus Algorithm
2017-04-05	bigstep	Stepwise Selection for Large Data Sets
2017-04-05	demogR	Analysis of Age-Structured Demographic Models
2017-04-05	diversitree	Comparative 'Phylogenetic' Analyses of Diversification
2017-04-05	jetset	One-to-One Gene-Probeset Mapping for Affymetrix Human Microarrays
2017-04-05	recommenderlab	Lab for Developing and Testing Recommender Algorithms
2017-04-05	sourcetools	Tools for Reading, Tokenizing and Parsing R Code
2017-04-05	stablespec	Stable Specification Search in Structural Equation Models
2017-04-05	TSPred	Functions for Benchmarking Time Series Prediction
2017-04-04	CircularDDM	Circular Drift-Diffusion Model
2017-04-04	ctmcmove	Modeling Animal Movement with Continuous-Time Discrete-Space Markov Chains
2017-04-04	diveRsity	A Comprehensive, General Purpose Population Genetics Analysis Package
2017-04-04	HYRISK	Hybrid Methods for Addressing Uncertainty in RISK Assessments
2017-04-04	koRpus	An R Package for Text Analysis
2017-04-04	LassoBacktracking	Modelling Interactions in High-Dimensional Data with Backtracking
2017-04-04	MultiVarSel	Variable Selection in the Multivariate Linear Model
2017-04-04	sensitivityfull	Sensitivity Analysis for Full Matching in Observational Studies
2017-04-04	survival	Survival Analysis
2017-04-04	TSMN	Truncated Scale Mixtures of Normal Distributions
2017-04-04	VetResearchLMM	Linear Mixed Models - An Introduction with Applications in Veterinary Research
2017-04-04	weightr	Estimating Weight-Function Models for Publication Bias
2017-04-03	afmToolkit	Functions for Atomic Force Microscope Force-Distance Curves Analysis
2017-04-03	benchr	High Precise Measurement of R Expressions Execution Time
2017-04-03	BigVAR	Dimension Reduction Methods for Multivariate Time Series
2017-04-03	btb	Beyond the Border
2017-04-03	Calculator.LR.FNs	Calculator for LR Fuzzy Numbers
2017-04-03	downsize	A Tool to Downsize Large Workflows for Testing
2017-04-03	FSInteract	Fast Searches for Interactions
2017-04-03	goftest	Classical Goodness-of-Fit Tests for Univariate Distributions
2017-04-03	groupsubsetselection	Group Subset Selection
2017-04-03	HMR	Flux Estimation with Static Chamber Data
2017-04-03	mrbsizeR	Scale Space Multiresolution Analysis of Random Signals
2017-04-03	nlshelper	Convenient Functions for Non-Linear Regression
2017-04-03	RCEIM	R Cross Entropy Inspired Method for Optimization
2017-04-03	relMix	Relationship Inference for DNA Mixtures
2017-04-03	RPtests	Goodness of Fit Tests for High-Dimensional Linear Regression Models
2017-04-03	RsimMosaic	R Simple Image Mosaic Creation Library
2017-04-03	scuba	Diving Calculations and Decompression Models
2017-04-03	sensors4plumes	Test and Optimise Sampling Designs Based on Plume Simulations
2017-04-03	sizeMat	Estimate Size at Sexual Maturity
2017-04-03	UPMASK	Unsupervised Photometric Membership Assignment in Stellar Clusters
2017-04-03	vesselr	Gradient and Vesselness Tools for Arrays and NIfTI Images
2017-04-03	xbreed	Genomic Simulation of Purebred and Crossbred Populations
2017-04-03	xyz	The 'xyz' Algorithm for Fast Interaction Search in High-Dimensional Data
2017-04-02	enrichR	Provides an R Interface to 'Enrichr'
2017-04-02	ggspatial	Spatial Data Framework for ggplot2
2017-04-02	lsgl	Linear Multiple Output Sparse Group Lasso
2017-04-02	medicare	Tools for Obtaining and Cleaning Medicare Public Use Files
2017-04-02	miscor	Miscellaneous Functions for the Correlation Coefficient
2017-04-02	msgl	High Dimensional Multiclass Classification Using Sparse Group Lasso
2017-04-02	RApiDatetime	R API Datetime
2017-04-02	sglOptim	Generic Sparse Group Lasso Solver
2017-04-02	xergm	Extensions of Exponential Random Graph Models
2017-04-01	corpcor	Efficient Estimation of Covariance and (Partial) Correlation
2017-04-01	EMVC	Entropy Minimization over Variable Clusters
2017-04-01	grapes	Make Binary Operators
2017-04-01	hgm	Holonomic Gradient Method and Gradient Descent
2017-04-01	InterfaceqPCR	GUI to Analyse qPCR Results after PMA Treatment or not
2017-04-01	meteoForecast	Numerical Weather Predictions
2017-04-01	ncdf4	Interface to Unidata netCDF (Version 4 or Earlier) Format Data Files
2017-04-01	SARP.moodle	XML Output Functions for Easy Creation of Moodle Questions
2017-04-01	sss	Tools for Importing Files in the Triple-s (Standard Survey Structure) Format
2017-04-01	StMoMo	Stochastic Mortality Modelling
2017-04-01	tensorr	Sparse Tensors in R
2017-04-01	tnam	Temporal Network Autocorrelation Models (TNAM)
2017-04-01	VBmix	Variational Bayesian Mixture Models
2017-03-31	aptg	Automatic Phylogenetic Tree Generator
2017-03-31	bipartite	Visualising Bipartite Networks and Calculating Some (Ecological) Indices
2017-03-31	cobs	Constrained B-Splines (Sparse Matrix Based)
2017-03-31	datautils	Timestamps and Advanced Plotting
2017-03-31	focusedMDS	Focused, Interactive Multidimensional Scaling
2017-03-31	ggdmc	Dynamic Model of Choice with Parallel Computation, and C++ Capabilities
2017-03-31	gRim	Graphical Interaction Models
2017-03-31	kscons	A Bayesian Approach for Protein Residue Contact Prediction using the Knob-Socket Model of Protein Tertiary Structure
2017-03-31	lava.tobit	Latent Variable Models with Censored and Binary Outcomes
2017-03-31	NADA	Nondetects and Data Analysis for Environmental Data
2017-03-31	PCGSE	Principal Component Gene Set Enrichment
2017-03-31	RXKCD	Get XKCD Comic from R
2017-03-31	semiArtificial	Generator of Semi-Artificial Data
2017-03-31	xergm.common	Common Infrastructure for Extensions of Exponential Random Graph Models
2017-03-30	animation	A Gallery of Animations in Statistics and Utilities to Create Animations
2017-03-30	gasfluxes	Greenhouse Gas Flux Calculation from Chamber Measurements
2017-03-30	mstR	Procedures to Generate Patterns under Multistage Testing
2017-03-30	optim.functions	Standard Benchmark Optimization Functions
2017-03-30	Rd2roxygen	Convert Rd to 'Roxygen' Documentation
2017-03-30	smnet	Smoothing for Stream Network Data
2017-03-30	sodium	A Modern and Easy-to-Use Crypto Library
2017-03-30	webp	A New Format for Lossless and Lossy Image Compression
2017-03-29	AMCTestmakeR	Generate LaTeX Code for Auto-Multiple-Choice (AMC)
2017-03-29	ApacheLogProcessor	Process the Apache Web Server Log Files
2017-03-29	apaStyle	Generate APA Tables for MS Word
2017-03-29	BLModel	Black-Litterman Posterior Distribution
2017-03-29	care	High-Dimensional Regression and CAR Score Variable Selection
2017-03-29	expm	Matrix Exponential, Log, 'etc'
2017-03-29	fam2r	From 'Familias' to R
2017-03-29	metavcov	Variance-Covariance Matrix for Multivariate Meta-Analysis
2017-03-29	moezipfR	Marshall-Olkin Extended Zipf
2017-03-29	odeintr	C++ ODE Solvers Compiled on-Demand
2017-03-29	patternize	Quantification of Color Pattern Variation
2017-03-29	tilegramsR	R Spatial Data for Tilegrams
2017-03-29	tsqn	Applications of the Qn Estimator to Time Series (Univariate and Multivariate)
2017-03-28	itan	Item Analysis for Multiple Choice Tests
2017-03-28	mmeta	Multivariate Meta-Analysis
2017-03-28	sejmRP	An Information About Deputies and Votings in Polish Diet from Seventh to Eighth Term of Office
2017-03-28	shinyHeatmaply	Deploy 'heatmaply' using 'shiny'
2017-03-28	XBRL	Extraction of Business Financial Information from 'XBRL' Documents
2017-03-27	dc3net	Inferring Condition-Specific Networks via Differential Network Inference
2017-03-27	flexsurv	Flexible Parametric Survival and Multi-State Models
2017-03-27	loo	Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian Models
2017-03-27	lulcc	Land Use Change Modelling in R
2017-03-27	mtconnectR	Read Data from Delimited 'MTConnect' Data Files and Perform some Analysis
2017-03-27	pgirmess	Data Analysis in Ecology
2017-03-27	pooh	Partial Orders and Relations
2017-03-27	qrcm	Quantile Regression Coefficients Modeling
2017-03-27	semPlot	Path Diagrams and Visual Analysis of Various SEM Packages' Output
2017-03-27	TSHRC	Two Stage Hazard Rate Comparison
2017-03-27	ump	Uniformly Most Powerful Tests
2017-03-26	aster2	Aster Models
2017-03-26	FamEvent	Family Age-at-Onset Data Simulation and Penetrance Estimation
2017-03-26	frair	Tools for Functional Response Analysis
2017-03-26	gems	Generalized Multistate Simulation Model
2017-03-26	MVLM	Multivariate Linear Model with Analytic p-Values
2017-03-26	NetworkRiskMeasures	Risk Measures for (Financial) Networks
2017-03-25	fftwtools	Wrapper for 'FFTW3' Includes: One-Dimensional Univariate, One-Dimensional Multivariate, and Two-Dimensional Transform
2017-03-25	lattice	Trellis Graphics for R
2017-03-25	maptools	Tools for Reading and Handling Spatial Objects
2017-03-25	pwr	Basic Functions for Power Analysis
2017-03-25	slimrec	Sparse Linear Method to Predict Ratings and Top-N Recommendations
2017-03-25	support.BWS2	Basic Functions for Supporting an Implementation of Case 2 Best-Worst Scaling
2017-03-25	TeachBayes	Teaching Bayesian Inference
2017-03-25	vortexRdata	Example Data for R Package 'vortexR'
2017-03-24	aroma.affymetrix	Analysis of Large Affymetrix Microarray Data Sets
2017-03-24	bkmr	Bayesian Kernel Machine Regression
2017-03-24	docstring	Provides Docstring Capabilities to R Functions
2017-03-24	fitdistrplus	Help to Fit of a Parametric Distribution to Non-Censored or Censored Data
2017-03-24	FuzzyR	Fuzzy Logic Toolkit for R
2017-03-24	GraphKit	Estimating Structural Invariants of Graphical Models
2017-03-24	IPWsurvival	Propensity Score Based Adjusted Survival Curves and Corresponding Log-Rank Statistic
2017-03-24	metagear	Comprehensive Research Synthesis Tools for Systematic Reviews and Meta-Analysis
2017-03-24	PCFAM	Computation of Ancestry Scores with Mixed Families and Unrelated Individuals
2017-03-24	PortfolioEffectHFT	High Frequency Portfolio Analytics by PortfolioEffect
2017-03-24	rbamtools	Read and Write BAM (Binary Alignment) Files
2017-03-24	rriskDistributions	Fitting Distributions to Given Data or Known Quantiles
2017-03-23	affluenceIndex	Affluence Indices
2017-03-23	aLFQ	Estimating Absolute Protein Quantities from Label-Free LC-MS/MS Proteomics Data
2017-03-23	diverse	Diversity Measures for Complex Systems
2017-03-23	lero.lero	Generate 'Lero Lero' Quotes
2017-03-23	openxlsx	Read, Write and Edit XLSX Files
2017-03-23	oXim	Oxycline Index from Matrix Echograms
2017-03-23	sbart	Sequential BART for Imputation of Missing Covariates
2017-03-23	simctest	Safe Implementation of Monte Carlo Tests
2017-03-23	spatsurv	Bayesian Spatial Survival Analysis with Parametric Proportional Hazards Models
2017-03-23	summariser	Easy Calculation and Visualisation of Confidence Intervals
2017-03-23	tsxtreme	Bayesian Modelling of Extremal Dependence in Time Series
2017-03-22	benford.analysis	Benford Analysis for Data Validation and Forensic Analytics
2017-03-22	Biocomb	Feature Selection and Classification with the Embedded Validation Procedures for Biomedical Data Analysis
2017-03-22	CVR	Canonical Variate Regression
2017-03-22	margins	Marginal Effects for Model Objects
2017-03-22	mMPA	Implementation of Marker-Assisted Mini-Pooling with Algorithm
2017-03-22	neuropsychology	Toolbox for Psychologists, Neuropsychologists and Neuroscientists
2017-03-22	pathmapping	Compute Deviation and Correspondence Between Spatial Paths
2017-03-22	polyclip	Polygon Clipping
2017-03-22	randomizeBE	Create a Random List for Crossover Studies
2017-03-22	ukds	Reproducible Data Retrieval from the UK Data Service
2017-03-22	vipor	Plot Categorical Data Using Quasirandom Noise and Density Estimates
2017-03-22	xlsimple	'XLConnect' Wrapper
2017-03-21	addhazard	Fit Additive Hazards Models for Survival Analysis
2017-03-21	averisk	Calculation of Average Population Attributable Fractions and Confidence Intervals
2017-03-21	BWStest	Baumgartner Weiss Schindler Test of Equal Distributions
2017-03-21	censReg	Censored Regression (Tobit) Models
2017-03-21	distory	Distance Between Phylogenetic Histories
2017-03-21	effsize	Efficient Effect Size Computation
2017-03-21	ega	Error Grid Analysis
2017-03-21	FMC	Factorial Experiments with Minimum Level Changes
2017-03-21	gbm	Generalized Boosted Regression Models
2017-03-21	gpg	GNU Privacy Guard for R
2017-03-21	interactionTest	Calculates Critical Test Statistics to Control False Discovery and Familywise Error Rates in Marginal Effects Plots
2017-03-21	orgutils	Helper Functions for Org Files
2017-03-21	pacotest	Testing for Partial Copulas and the Simplifying Assumption in Vine Copulas
2017-03-21	photobiologyPlants	Plant Photobiology Related Functions and Data
2017-03-21	pkgconfig	Private Configuration for 'R' Packages
2017-03-21	qmethod	Analysis of Subjective Perspectives Using Q Methodology
2017-03-21	qrLMM	Quantile Regression for Linear Mixed-Effects Models
2017-03-21	qrNLMM	Quantile Regression for Nonlinear Mixed-Effects Models
2017-03-21	rnaturalearth	World Map Data from Natural Earth
2017-03-21	rolr	Finding Optimal Three-Group Splits Based on a Survival Outcome
2017-03-21	rsvg	Render SVG Images into PDF, PNG, PostScript, or Bitmap Arrays
2017-03-21	stmgp	Rapid and Accurate Genetic Prediction Modeling for Genome-Wide Association or Whole-Genome Sequencing Study Data
2017-03-21	TauStar	Efficient Computation and Testing of the Bergsma-Dassios Sign Covariance
2017-03-21	UpSetR	A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets
2017-03-20	disposables	Create Disposable R Packages for Testing
2017-03-20	EstimateGroupNetwork	Perform the Joint Graphical Lasso and Selects Tuning Parameters
2017-03-20	evclass	Evidential Distance-Based Classification
2017-03-20	ggsn	North Symbols and Scale Bars for Maps Created with 'ggplot2' or 'ggmap'
2017-03-20	gRbase	A Package for Graphical Modelling in R
2017-03-20	LNIRT	LogNormal Response Time Item Response Theory Models
2017-03-20	LW1949	An Automated Approach to Evaluating Dose-Effect Experiments Following Litchfield and Wilcoxon (1949)
2017-03-20	photobiologyInOut	Read Spectral and Logged Data from Foreign Files
2017-03-20	photobiologyWavebands	Waveband Definitions for UV, VIS, and IR Radiation
2017-03-20	RAC	R Package for Aqua Culture
2017-03-20	rdefra	Interact with the UK AIR Pollution Database from DEFRA
2017-03-20	refGenome	Gene and Splice Site Annotation Using Annotation Data from Ensembl and UCSC Genome Browsers
2017-03-20	Rvoterdistance	Calculates the Distance Between Voter and Multiple Polling Locations
2017-03-20	sadists	Some Additional Distributions
2017-03-20	sticky	Persist Attributes Across Data Operations
2017-03-20	TreeSim	Simulating Phylogenetic Trees
2017-03-19	dbscan	Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms
2017-03-19	fasteraster	Raster Image Processing and Vector Recognition
2017-03-19	hyfo	Hydrology and Climate Forecasting
2017-03-19	shinyShortcut	Creates an Executable Shortcut for Shiny Applications
2017-03-19	supc	The Self-Updating Process Clustering Algorithms
2017-03-18	networkD3	D3 JavaScript Network Graphs from R
2017-03-18	OSCV	One-Sided Cross-Validation
2017-03-18	pcrsim	Simulation of the Forensic DNA Process
2017-03-18	PDQutils	PDQ Functions via Gram Charlier, Edgeworth, and Cornish Fisher Approximations
2017-03-18	SpatMCA	Regularized Spatial Maximum Covariance Analysis
2017-03-17	adhoc	Calculate Ad Hoc Distance Thresholds for DNA Barcoding Identification
2017-03-17	BASS	Bayesian Adaptive Spline Surfaces
2017-03-17	chemometrics	Multivariate Statistical Analysis in Chemometrics
2017-03-17	denseFLMM	Functional Linear Mixed Models for Densely Sampled Data
2017-03-17	frontier	Stochastic Frontier Analysis
2017-03-17	ropercenter	Reproducible Data Retrieval from the Roper Center Data Archive
2017-03-17	textreg	n-Gram Text Regression, aka Concise Comparative Summarization
2017-03-16	BCSub	A Bayesian Semiparametric Factor Analysis Model for Subtype Identification (Clustering)
2017-03-16	cir	Centered Isotonic Regression and Dose-Response Utilities
2017-03-16	cluster	"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.
2017-03-16	CNull	Fast Algorithms for Frequency-Preserving Null Models in Ecology
2017-03-16	english	Translate Integers into English
2017-03-16	FlexDir	Tools to Work with the Flexible Dirichlet Distribution
2017-03-16	micEcon	Microeconomic Analysis and Modelling
2017-03-16	micEconAids	Demand Analysis with the Almost Ideal Demand System (AIDS)
2017-03-16	missMDA	Handling Missing Values with Multivariate Data Analysis
2017-03-16	mixAK	Multivariate Normal Mixture Models and Mixtures of Generalized Linear Mixed Models Including Model Based Clustering
2017-03-16	potts	Markov Chain Monte Carlo for Potts Models
2017-03-16	qqman	Q-Q and Manhattan Plots for GWAS Data
2017-03-16	RankingProject	The Ranking Project: Visualizations for Comparing Populations
2017-03-16	rolypoly	Identifying Trait-Relevant Functional Annotations
2017-03-15	AdaptGauss	Gaussian Mixture Models (GMM)
2017-03-15	dynaTree	Dynamic Trees for Learning and Design
2017-03-15	fuzzyRankTests	Fuzzy Rank Tests and Confidence Intervals
2017-03-15	gee4	Generalised Estimating Equations (GEE/WGEE) using 'Armadillo' and S4
2017-03-15	GERGM	Estimation and Fit Diagnostics for Generalized Exponential Random Graph Models
2017-03-15	GPvam	Maximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling
2017-03-15	mitml	Tools for Multiple Imputation in Multilevel Modeling
2017-03-15	mlr	Machine Learning in R
2017-03-15	pbkrtest	Parametric Bootstrap and Kenward Roger Based Methods for Mixed Model Comparison
2017-03-15	redist	Markov Chain Monte Carlo Methods for Redistricting Simulation
2017-03-14	clusternomics	Integrative Clustering for Heterogeneous Biomedical Datasets
2017-03-14	copCAR	Fitting the copCAR Regression Model for Discrete Areal Data
2017-03-14	evoper	Evolutionary Parameter Estimation for 'Repast Simphony' Models
2017-03-14	FLightR	Hidden Markov Model for Solar Geolocation Archival Tags
2017-03-14	gatepoints	Easily Gate or Select Points on a Scatter Plot
2017-03-14	linbin	Binning and Plotting of Linearly Referenced Data
2017-03-14	outreg	Regression Table for Publication
2017-03-14	scalpel	Processes Calcium Imaging Data
2017-03-14	sigmoid	Sigmoid Functions for Machine Learning
2017-03-14	simboot	Simultaneous Inference for Diversity Indices
2017-03-14	StereoMorph	Stereo Camera Calibration and Reconstruction
2017-03-13	ABCanalysis	Computed ABC Analysis
2017-03-13	bioOED	Sensitivity Analysis and Optimum Experiment Design for Microbial Inactivation
2017-03-13	collpcm	Collapsed Latent Position Cluster Model for Social Networks
2017-03-13	Conigrave	Flexible Tools for Multiple Imputation
2017-03-13	discSurv	Discrete Time Survival Analysis
2017-03-13	gazepath	Parse Eye-Tracking Data into Fixations
2017-03-13	optCluster	Determine Optimal Clustering Algorithm and Number of Clusters
2017-03-13	ProfessR	Grades Setting and Exam Maker
2017-03-13	radmixture	Calculate Population Stratification
2017-03-13	revealjs	R Markdown Format for 'reveal.js' Presentations
2017-03-13	WhopGenome	High-Speed Processing of VCF, FASTA and Alignment Data
2017-03-12	bigFastlm	Fast Linear Models for Objects from the 'bigmemory' Package
2017-03-12	cricketr	Analyze Cricketers Based on ESPN Cricinfo Statsguru
2017-03-12	FastImputation	Learn from Training Data then Quickly Fill in Missing Data
2017-03-12	gstat	Spatial and Spatio-Temporal Geostatistical Modelling, Prediction and Simulation
2017-03-12	hydrogeo	Groundwater Data Presentation and Interpretation
2017-03-11	BANFF	Bayesian Network Feature Finder
2017-03-11	cmpprocess	Flexible Modeling of Count Processes
2017-03-11	DHARMa	Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models
2017-03-11	iNextPD	Interpolation and Extrapolation for Phylogenetic Diversity
2017-03-11	kequate	The Kernel Method of Test Equating
2017-03-11	rdataretriever	R Interface to the Data Retriever
2017-03-11	stratification	Univariate Stratification of Survey Populations
2017-03-10	BBmisc	Miscellaneous Helper Functions for B. Bischl
2017-03-10	docxtools	Tools for R Markdown to Docx Documents
2017-03-10	DREGAR	Regularized Estimation of Dynamic Linear Regression in the Presence of Autocorrelated Residuals (DREGAR)
2017-03-10	FSAdata	Data to Support Fish Stock Assessment ('FSA') Package
2017-03-10	gmp	Multiple Precision Arithmetic
2017-03-10	HoRM	Supplemental Functions and Datasets for "Handbook of Regression Methods"
2017-03-10	LeafArea	Rapid Digital Image Analysis of Leaf Area
2017-03-10	mixtools	Tools for Analyzing Finite Mixture Models
2017-03-10	randomForest.ddR	Distributed 'randomForest' for Big Data using 'ddR' API
2017-03-10	rinat	Access iNaturalist Data Through APIs
2017-03-10	SigOptR	R API Wrapper for SigOpt
2017-03-10	Stickbreaker	Fits Stickbreaking, Multiplicative and Additive Models to Data
2017-03-09	CONS	Consonance Analysis Module
2017-03-09	DAAGbio	Data Sets and Functions, for Demonstrations with Expression Arrays and Gene Sequences
2017-03-09	emon	Tools for Environmental and Ecological Survey Design
2017-03-09	FuzzyAHP	(Fuzzy) AHP Calculation
2017-03-09	gnumeric	Read Data from Files Readable by 'gnumeric'
2017-03-09	imputeR	A General Imputation Framework in R
2017-03-09	iSDM	Invasive Species Distribution Modelling
2017-03-09	mvctm	Multivariate Variance Components Tests for Multilevel Data
2017-03-09	oglmx	Estimation of Ordered Generalized Linear Models
2017-03-09	SymTS	Symmetric Tempered Stable Distributions
2017-03-09	systemfit	Estimating Systems of Simultaneous Equations
2017-03-09	taxonomizr	Functions to Work with NCBI Accessions and Taxonomy
2017-03-09	Ultimixt	Bayesian Analysis of Location-Scale Mixture Models using a Weakly Informative Prior
2017-03-09	VertexSort	Network Hierarchical Structure and Randomization
2017-03-08	badger	Badge for R Package
2017-03-08	BCellMA	B Cell Receptor Somatic Hyper Mutation Analysis
2017-03-08	binomSamSize	Confidence Intervals and Sample Size Determination for a Binomial Proportion under Simple Random Sampling and Pooled Sampling
2017-03-08	CatEncoders	Encoders for Categorical Variables
2017-03-08	CNLTtsa	Complex-Valued Wavelet Lifting for Univariate and Bivariate Time Series Analysis
2017-03-08	MBA	Multilevel B-Spline Approximation
2017-03-08	NHLData	Scores for Every Season Since the Founding of the NHL in 1917
2017-03-08	nhlscrapr	Compiling the NHL Real Time Scoring System Database for easy use in R
2017-03-08	prop.comb.RR	Analyzing Combination of Proportions and Relative Risk
2017-03-08	readOffice	Read Text Out of Modern Office Files
2017-03-08	STMedianPolish	Spatio-Temporal Median Polish
2017-03-07	ALSM	Companion to Applied Linear Statistical Models
2017-03-07	cpr	Control Polygon Reduction
2017-03-07	fdaMixed	Functional Data Analysis in a Mixed Model Framework
2017-03-07	GDAtools	A Toolbox for the Analysis of Categorical Data in Social Sciences, and Especially Geometric Data Analysis
2017-03-07	GetoptLong	Parsing Command-Line Arguments and Variable Interpolation
2017-03-07	otinference	Inference for Optimal Transport
2017-03-07	quadrupen	Sparsity by Worst-Case Quadratic Penalties
2017-03-07	remindR	Insert and Extract "Reminders" from Function Comments
2017-03-07	rkt	Mann-Kendall Test, Seasonal and Regional Kendall Tests
2017-03-07	SpecsVerification	Forecast Verification Routines for Ensemble Forecasts of Weather and Climate
2017-03-06	BMAmevt	Multivariate Extremes: Bayesian Estimation of the Spectral Measure
2017-03-06	DySeq	Functions for Dyadic Sequence Analyses
2017-03-06	edarf	Exploratory Data Analysis using Random Forests
2017-03-06	funchir	Convenience Functions by Michael Chirico
2017-03-06	gt4ireval	Generalizability Theory for Information Retrieval Evaluation
2017-03-06	infoDecompuTE	Information Decomposition of Two-Phase Experiments
2017-03-06	interflex	Multiplicative Interaction Models Diagnostics and Visualization
2017-03-06	mc2d	Tools for Two-Dimensional Monte-Carlo Simulations
2017-03-06	MLID	Multilevel Index of Dissimilarity
2017-03-06	prodlim	Product-Limit Estimation for Censored Event History Analysis
2017-03-06	ptw	Parametric Time Warping
2017-03-06	Rcssplot	Styling of Graphics using Cascading Style Sheets
2017-03-06	twilio	An Interface to the Twilio API for R
2017-03-05	IGM.MEA	IGM MEA Analysis
2017-03-05	imPois	Imprecise Inference for Poisson Sampling Models
2017-03-05	VarED	Variance Estimation using Difference-Based Methods
2017-03-04	CNLTreg	Complex-Valued Wavelet Lifting for Signal Denoising
2017-03-04	CPsurv	Nonparametric Change Point Estimation for Survival Data
2017-03-04	icarus	Calibrates and Reweights Units in Samples
2017-03-04	maGUI	A Graphical User Interface for Microarray Data Analysis and Annotation
2017-03-04	RcppShark	R Interface to the Shark Machine Learning Library
2017-03-04	rotl	Interface to the 'Open Tree of Life' API
2017-03-04	SubgrpID	Patient Subgroup Identification for Clinical Drug Development
2017-03-03	brt	Biological Relevance Testing
2017-03-03	CensSpatial	Censored Spatial Models
2017-03-03	cghRA	Array CGH Data Analysis and Visualization
2017-03-03	cronR	Schedule R Scripts and Processes with the 'cron' Job Scheduler
2017-03-03	Demerelate	Functions to Calculate Relatedness on Diploid Genetic Data
2017-03-03	disco	Discordance and Concordance of Transcriptomic Responses
2017-03-03	Dpit	Distribution Pitting
2017-03-03	learningCurve	An Implementation of Crawford's and Wright's Learning Curve Production Functions
2017-03-03	MDPtoolbox	Markov Decision Processes Toolbox
2017-03-03	sskm	Stable Sparse K-Means
2017-03-03	texreg	Conversion of R Regression Output to LaTeX or HTML Tables
2017-03-02	BNPdensity	Ferguson-Klass Type Algorithm for Posterior Normalized Random Measures
2017-03-02	Brq	Bayesian Analysis of Quantile Regression Models
2017-03-02	CompetingRisk	The Semi-Parametric Cumulative Incidence Function
2017-03-02	cpt	Classification Permutation Test
2017-03-02	cropdatape	Open Data of Agricultural Production of Crops of Peru
2017-03-02	DiversityOccupancy	Building Diversity Models from Multiple Species Occupancy Models
2017-03-02	erp.easy	Event-Related Potential (ERP) Data Exploration Made Easy
2017-03-02	fitplc	Fit Hydraulic Vulnerability Curves
2017-03-02	gaiah	Genetic and Isotopic Assignment Accounting for Habitat Suitability
2017-03-02	isa2	The Iterative Signature Algorithm
2017-03-02	keypress	Wait for a Key Press in a Terminal
2017-03-02	maxstat	Maximally Selected Rank Statistics
2017-03-02	msgtools	Tools for Developing Diagnostic Messages
2017-03-02	parsedate	Recognize and Parse Dates in Various Formats, Including All ISO 8601 Formats
2017-03-02	pingr	Check if a Remote Computer is Up
2017-03-02	sand	Statistical Analysis of Network Data with R
2017-03-02	STPGA	Selection of Training Populations by Genetic Algorithm
2017-03-02	swirl	Learn R, in R
2017-03-02	WPKDE	Weighted Piecewise Kernel Density Estimation
2017-03-02	xyloplot	A Method for Creating Xylophone-Like Frequency Density Plots
2017-03-01	dotenv	Load Environment Variables from '.env'
2017-03-01	exactRankTests	Exact Distributions for Rank and Permutation Tests
2017-03-01	ipred	Improved Predictors
2017-03-01	plspolychaos	Sensitivity Indexes from Polynomial Chaos Expansions and PLS
2017-03-01	polychaosbasics	Sensitivity Indexes Calculated from Polynomial Chaos Expansions
2017-03-01	pssm	Piecewise Exponential Model for Time to Progression and Time from Progression to Death
2017-03-01	R4CouchDB	A R Convenience Layer for CouchDB 2.0
2017-02-28	dglars	Differential Geometric Least Angle Regression
2017-02-28	DiffNet	Detection of Statistically Significant Changes in Complex Biological Networks
2017-02-28	GLDreg	Fit GLD Regression Model and GLD Quantile Regression Model to Empirical Data
2017-02-28	glm.ddR	Distributed 'glm' for Big Data using 'ddR' API
2017-02-28	operator.tools	Utilities for Working with R's Operators
2017-02-28	PRISMA	Protocol Inspection and State Machine Analysis
2017-02-28	randgeo	Generate Random 'WKT' or 'GeoJSON'
2017-02-28	rcc	Parametric Bootstrapping to Control Rank Conditional Coverage
2017-02-28	ResourceSelection	Resource Selection (Probability) Functions for Use-Availability Data
2017-02-28	RPMM	Recursively Partitioned Mixture Model
2017-02-27	apa	Format Outputs of Statistical Tests According to APA Guidelines
2017-02-27	bgmm	Gaussian Mixture Modeling Algorithms and the Belief-Based Mixture Modeling
2017-02-27	bootstrap	Functions for the Book "An Introduction to the Bootstrap"
2017-02-27	CAvariants	Correspondence Analysis Variants
2017-02-27	diffr	Display Differences Between Two Files using Codediff Library
2017-02-27	dirmcmc	Directional Metropolis Hastings Algorithm
2017-02-27	easyPubMed	Search and Retrieve Scientific Publication Records from PubMed
2017-02-27	extdplyr	Data Manipulation Extensions of 'Dplyr' and 'Tidyr'
2017-02-27	fontHind	Additional 'ggplot2' Themes Using 'Hind' Fonts
2017-02-27	fontMPlus	Additional 'ggplot2' Themes Using 'M+' Fonts
2017-02-27	gbts	Hyperparameter Search for Gradient Boosted Trees
2017-02-27	leafletCN	An R Gallery for China and Other Geojson Choropleth Map in Leaflet
2017-02-27	misreport	Statistical Analysis of Misreporting on Sensitive Survey Questions
2017-02-27	pmmlTransformations	Transforms Input Data from a PMML Perspective
2017-02-27	qap	Heuristics for the Quadratic Assignment Problem (QAP)
2017-02-27	ridge	Ridge Regression with Automatic Selection of the Penalty Parameter
2017-02-26	automagic	Automagically Document and Install Packages Necessary to Run R Code
2017-02-26	AWR.Kinesis	Amazon 'Kinesis' Consumer Application for Stream Processing
2017-02-26	gdistance	Distances and Routes on Geographical Grids
2017-02-26	hrbrthemes	Additional Themes, Theme Components and Utilities for 'ggplot2'
2017-02-26	IDPSurvival	Imprecise Dirichlet Process for Survival Analysis
2017-02-26	MultisiteMediation	Causal Mediation Analysis in Multisite Trials
2017-02-26	stream	Infrastructure for Data Stream Mining
2017-02-25	betacal	Beta Calibration
2017-02-25	mixR	Finite Mixture Modeling for Raw and Binned Data
2017-02-25	recexcavAAR	3D Reconstruction of Archaeological Excavations
2017-02-25	RefFreeEWAS	EWAS using Reference-Free DNA Methylation Mixture Deconvolution
2017-02-24	BayesS5	Bayesian Variable Selection Using Simplified Shotgun Stochastic Search with Screening (S5)
2017-02-24	ccafs	Client for 'CCAFS' 'GCM' Data
2017-02-24	europop	Historical Populations of European Cities, 1500-1800
2017-02-24	falconx	Finding Allele-Specific Copy Number in Whole-Exome Sequencing Data
2017-02-24	gss	General Smoothing Splines
2017-02-24	hasseDiagram	Drawing Hasse Diagram
2017-02-24	lavaan	Latent Variable Analysis
2017-02-24	miscset	Miscellaneous Tools Set
2017-02-24	OpenRepGrid	Tools to Analyse Repertory Grid Data
2017-02-24	profileR	Profile Analysis of Multivariate Data in R
2017-02-24	som.nn	Topological k-NN Classifier Based on Self-Organising Maps
2017-02-24	TAR	Bayesian Modeling of Autoregressive Threshold Time Series Models
2017-02-24	walkr	Random Walks in the Intersection of Hyperplanes and the N-Simplex
2017-02-23	bestglm	Best Subset GLM
2017-02-23	EnviroPRA	Environmental Probabilistic Risk Assessment Tools
2017-02-23	gower	Gower's Distance
2017-02-23	GsymPoint	Estimation of the Generalized Symmetry Point, an Optimal Cutpoint in Continuous Diagnostic Tests
2017-02-23	InvasionCorrection	Invasion Correction
2017-02-23	naptime	A Flexible and Robust Sys.sleep() Replacement
2017-02-23	neighbr	Classification, Regression, Clustering with K Nearest Neighbors
2017-02-23	prefeR	R Package for Pairwise Preference Elicitation
2017-02-23	robustarima	Robust ARIMA Modeling
2017-02-23	tuckerR.mmgg	Three-Mode Principal Components Analysis
2017-02-22	BayesSpec	Bayesian Spectral Analysis Techniques
2017-02-22	BCC1997	Calculation of Option Prices Based on a Universal Solution
2017-02-22	bsearchtools	Binary Search Tools
2017-02-22	choroplethrAdmin1	Contains an Administrative-Level-1 Map of the World
2017-02-22	DecorateR	Fit and Deploy DECORATE Trees
2017-02-22	idendr0	Interactive Dendrograms
2017-02-22	Mangrove	Risk Prediction on Trees
2017-02-22	R2OpenBUGS	Running OpenBUGS from R
2017-02-22	RWiener	Wiener Process Distribution Functions
2017-02-22	TSP	Traveling Salesperson Problem (TSP)
2017-02-21	AMModels	Adaptive Management Model Manager
2017-02-21	fifer	A Biostatisticians Toolbox for Various Activities, Including Plotting, Data Cleanup, and Data Analysis
2017-02-21	lclGWAS	Efficient Estimation of Discrete-Time Multivariate Frailty Model Using Exact Likelihood Function for Grouped Survival Data
2017-02-21	leaflet	Create Interactive Web Maps with the JavaScript 'Leaflet' Library
2017-02-21	mle.tools	Expected/Observed Fisher Information and Bias-Corrected Maximum Likelihood Estimate(s)
2017-02-21	rnaturalearthdata	World Vector Map Data from Natural Earth Used in 'rnaturalearth'
2017-02-21	stdvectors	C++ Standard Library Vectors in R
2017-02-20	AWR.KMS	A Simple Client to the 'AWS' Key Management Service
2017-02-20	BayesFM	Bayesian Inference for Factor Modeling
2017-02-20	CEoptim	Cross-Entropy R Package for Optimization
2017-02-20	colorr	Color Palettes for EPL, MLB, NBA, NHL, and NFL Teams
2017-02-20	dlib	Allow Access to the 'Dlib' C++ Library
2017-02-20	fileplyr	Chunk Processing or Split-Apply-Combine on Delimited Files and Distributed Dataframes
2017-02-20	genemodel	Gene Model Plotting in R
2017-02-20	gMOIP	'2D plots of linear or integer programming models'
2017-02-20	GSparO	Group Sparse Optimization
2017-02-20	OxyBS	Processing of Oxy-Bisulfite Microarray Data
2017-02-20	pawacc	Physical Activity with Accelerometers
2017-02-20	pollstR	Client for the HuffPost Pollster API
2017-02-20	Qtools	Utilities for Quantiles
2017-02-20	survRM2	Comparing Restricted Mean Survival Time
2017-02-20	textcat	N-Gram Based Text Categorization
2017-02-20	W3CMarkupValidator	R Interface to W3C Markup Validation Services
2017-02-19	eAnalytics	Dynamic Web-Based Analytics for the Energy Industry
2017-02-19	ggthemes	Extra Themes, Scales and Geoms for 'ggplot2'
2017-02-19	ROCt	Time-Dependent ROC Curve Estimators and Expected Utility Functions
2017-02-19	syllable	A Small Collection of Syllable Counting Functions
2017-02-19	upmfit	Unified Probability Model Fitting
2017-02-18	ALA4R	Atlas of Living Australia (ALA) Data and Resources in R
2017-02-18	AMCP	A Model Comparison Perspective
2017-02-18	bioimagetools	Tools for Microscopy Imaging
2017-02-18	GHap	Genome-Wide Haplotyping
2017-02-18	helsinki	R Tools for Helsinki Open Data
2017-02-18	mixtox	Curve Fitting and Mixture Toxicity Assessment
2017-02-18	yorkr	Analyze Cricket Performances Based on Data from Cricsheet
2017-02-17	BDWreg	Bayesian Inference for Discrete Weibull Regression
2017-02-17	BioPET	Biomarker Prognostic Enrichment Tool
2017-02-17	educineq	Compute and Decompose Inequality in Education
2017-02-17	EMMLi	A Maximum Likelihood Approach to the Analysis of Modularity
2017-02-17	gglogo	Geom for Logo Sequence Plots
2017-02-17	keyringr	Decrypt Passwords from Gnome Keyring, Windows Data Protection API and macOS Keychain
2017-02-17	marinespeed	Benchmark Data Sets and Functions for Marine Species Distribution Modelling
2017-02-17	paramGUI	A Shiny GUI for some Parameter Estimation Examples
2017-02-17	pca3d	Three Dimensional PCA Plots
2017-02-17	riverplot	Sankey or Ribbon Plots
2017-02-17	RPushbullet	R Interface to the Pushbullet Messaging Service
2017-02-16	EMSaov	The Analysis of Variance with EMS
2017-02-16	exact2x2	Exact Tests and Confidence Intervals for 2x2 Tables
2017-02-16	flexCWM	Flexible Cluster-Weighted Modeling
2017-02-16	hqreg	Regularization Paths for Lasso or Elastic-Net Penalized Huber Loss Regression and Quantile Regression
2017-02-16	mdscore	Improved Score Tests for Generalized Linear Models
2017-02-16	opusminer	OPUS Miner Algorithm for Filtered Top-k Association Discovery
2017-02-16	papeR	A Toolbox for Writing Pretty Papers and Reports
2017-02-16	ProliferativeIndex	Calculates and Analyzes the Proliferative Index
2017-02-16	rhoR	Rho for Inter Rater Reliability
2017-02-16	ridigbio	Interface to the iDigBio Data API
2017-02-16	rope	Model Selection with FDR Control of Selected Variables
2017-02-16	spdownscale	Spatial Downscaling Using Bias Correction Approach
2017-02-16	ubeR	Interface to the Uber API
2017-02-15	condir	Computation of P Values and Bayes Factors for Conditioning Data
2017-02-15	ggalt	Extra Coordinate Systems, 'Geoms', Statistical Transformations, Scales and Fonts for 'ggplot2'
2017-02-15	pathological	Path Manipulation Utilities
2017-02-15	velociraptr	Fossil Analysis
2017-02-15	warpMix	Mixed Effects Modeling with Warping for Functional Data Using B-Spline
2017-02-15	yesno	Ask a Custom Yes-No Question
2017-02-14	decoder	Decode Coded Variables to Plain Text and the Other Way Around
2017-02-14	dgodata	Data for the 'dgo' Package
2017-02-14	eefAnalytics	Analysing Education Trials
2017-02-14	emIRT	EM Algorithms for Estimating Item Response Theory Models
2017-02-14	MIAmaxent	Maxent Distribution Model Selection
2017-02-14	paperplanes	Distance Recordings from a Paper Plane Folding/Flying Experiment
2017-02-14	rapiclient	Dynamic OpenAPI/Swagger Client
2017-02-14	rdnb	R Interface to the 'Deutsche Nationalbibliothek (German National Library) API'
2017-02-14	schoRsch	Tools for Analyzing Factorial Experiments
2017-02-13	cope	Coverage Probability Excursion (CoPE) Sets
2017-02-13	ecosim	Toolbox for Aquatic Ecosystem Modeling
2017-02-13	LiblineaR	Linear Predictive Models Based on the 'LIBLINEAR' C/C++ Library
2017-02-13	PivotalR	A Fast, Easy-to-Use Tool for Manipulating Tables in Databases and a Wrapper of MADlib
2017-02-13	s2dverification	Set of Common Tools for Forecast Verification
2017-02-12	dynBiplotGUI	Full Interactive GUI for Dynamic Biplot in R
2017-02-12	fma	Data Sets from "Forecasting: Methods and Applications" by Makridakis, Wheelwright & Hyndman (1998)
2017-02-12	HRQoL	Health Related Quality of Life Analysis
2017-02-12	imputeMulti	Imputation Methods for Multivariate Multinomial Data
2017-02-12	purge	Purge Training Data from Models
2017-02-12	synthACS	Synthetic Microdata and Spatial MicroSimulation Modeling for ACS Data
2017-02-11	AF	Model-Based Estimation of Confounder-Adjusted Attributable Fractions
2017-02-11	DNAtools	Tools for Analysing Forensic Genetic DNA Data
2017-02-11	lmtest	Testing Linear Regression Models
2017-02-11	maxnet	Fitting 'Maxent' Species Distribution Models with 'glmnet'
2017-02-11	RADami	Phylogenetic Analysis of RADseq Data
2017-02-11	RGENERATE	Tools to Generate Vector Time Series
2017-02-11	RGENERATEPREC	Tools to Generate Daily-Precipitation Time Series
2017-02-11	RMAWGEN	Multi-Site Auto-Regressive Weather GENerator
2017-02-11	SetTest	Group Testing Procedures for Signal Detection and Goodness-of-Fit
2017-02-11	StVAR	Student's t Vector Autoregression (StVAR)
2017-02-10	funcy	Functional Clustering Algorithms
2017-02-09	dyn	Time Series Regression
2017-02-09	ggmosaic	Mosaic Plots in the 'ggplot2' Framework
2017-02-09	mrMLM	Multi-Locus Random-SNP-Effect Mixed Linear Model for Genome-Wide Association Studies and Linkage Analyses
2017-02-09	optbdmaeAT	Optimal Block Designs for Two-Colour cDNA Microarray Experiments
2017-02-09	RHRV	Heart Rate Variability Analysis of ECG Data
2017-02-09	RVsharing	Probability of Sharing Rare Variants among Relatives
2017-02-09	RWildbook	Interface for the 'Wildbook' Wildlife Data Management Framework
2017-02-09	seqMeta	Meta-Analysis of Region-Based Tests of Rare DNA Variants
2017-02-08	BayesCombo	Bayesian Evidence Combination
2017-02-08	FuzzyStatTra	Statistical Methods for Trapezoidal Fuzzy Numbers
2017-02-08	nse	Numerical Standard Errors Computation in R
2017-02-08	OCA	Optimal Capital Allocations
2017-02-08	tranSurv	Estimating a Survival Distribution in the Presence of Dependent Left Truncation and Right Censoring
2017-02-07	arabicStemR	Arabic Stemmer for Text Analysis
2017-02-07	GPB	Generalized Poisson Binomial Distribution
2017-02-07	pMineR	Processes Mining in Medicine
2017-02-07	SSBtools	Statistics Norway's Miscellaneous Small Tools
2017-02-06	Binarize	Binarization of One-Dimensional Data
2017-02-06	BiTrinA	Binarization and Trinarization of One-Dimensional Data
2017-02-06	cbird	Clustering of Multivariate Binary Data with Dimension Reduction via L1-Regularized Likelihood Maximization
2017-02-06	CompareTests	Correct for Verification Bias in Diagnostic Accuracy & Agreement
2017-02-06	event	Event History Procedures and Models
2017-02-06	gnlm	Generalized Nonlinear Regression Models
2017-02-06	growth	Multivariate Normal and Elliptically-Contoured Repeated Measurements Models
2017-02-06	LncFinder	Long Non-Coding RNA Identification Based on Features of Sequence, EIIP and Secondary Structure
2017-02-06	mdftracks	Read and Write 'MTrackJ Data Files'
2017-02-06	ontologyIndex	Functions for Reading Ontologies into R
2017-02-06	QuantileGradeR	Quantile-Adjusted Restaurant Grading
2017-02-06	repeated	Non-Normal Repeated Measurements Models
2017-02-06	rmutil	Utilities for Nonlinear Regression and Repeated Measurements Models
2017-02-06	roxygen2	In-Line Documentation for R
2017-02-06	samplingDataCRT	Sampling Data Within Different Study Designs for Cluster Randomized Trials
2017-02-06	SMLoutliers	Outlier Detection Using Statistical and Machine Learning Methods
2017-02-06	stable	Probability Functions and Generalized Regression Models for Stable Distributions
2017-02-06	supportInt	Calculates Likelihood Support Intervals for Common Data Types
2017-02-06	treebase	Discovery, Access and Manipulation of 'TreeBASE' Phylogenies
2017-02-06	ZIM	Zero-Inflated Models for Count Time Series with Excess Zeros
2017-02-05	AdMit	Adaptive Mixture of Student-t Distributions
2017-02-05	mbrglm	Median Bias Reduction in Binomial-Response GLMs
2017-02-05	random	True Random Numbers using RANDOM.ORG
2017-02-05	RiskPortfolios	Computation of Risk-Based Portfolios
2017-02-05	WikipediR	A MediaWiki API Wrapper
2017-02-04	bayesGARCH	Bayesian Estimation of the GARCH(1,1) Model with Student-t Innovations
2017-02-04	flippant	Dithionite Scramblase Assay Analysis
2017-02-04	INLABMA	Bayesian Model Averaging with INLA
2017-02-04	PeerPerformance	Luck-Corrected Peer Performance Analysis in R
2017-02-04	samplesizelogisticcasecontrol	Sample Size Calculations for Case-Control Studies
2017-02-04	superheat	A Graphical Tool for Exploring Complex Datasets Using Heatmaps
2017-02-04	tolerance	Statistical Tolerance Intervals and Regions
2017-02-03	BAMMtools	Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees
2017-02-03	bigsplines	Smoothing Splines for Large Samples
2017-02-03	GroupSeq	A GUI-Based Program to Compute Probabilities Regarding Group Sequential Designs
2017-02-03	PST	Probabilistic Suffix Trees and Variable Length Markov Chains
2017-02-02	BigQuic	Big Quadratic Inverse Covariance Estimation
2017-02-02	e1071	Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
2017-02-02	envirem	Generation of ENVIREM Variables
2017-02-02	evolqg	Tools for Evolutionary Quantitative Genetics
2017-02-02	frailtySurv	General Semiparametric Shared Frailty Model
2017-02-02	moveWindSpeed	Estimate Wind Speeds from Bird Trajectories
2017-02-02	mpe	Multiple Primary Endpoints
2017-02-02	powerAnalysis	Power Analysis in Experimental Design
2017-02-02	readHAC	Read Acoustic HAC Format
2017-02-02	robustX	'eXtra' / 'eXperimental' Functionality for Robust Statistics
2017-02-02	SignifReg	Significant Variable Selection in Linear Regression
2017-02-01	CRF	Conditional Random Fields
2017-02-01	demoKde	Kernel Density Estimation for Demonstration Purposes
2017-02-01	EnsCat	Clustering of Categorical Data
2017-02-01	fontBitstreamVera	Fonts with 'Bitstream Vera Fonts' License
2017-02-01	fontquiver	Set of Installed Fonts
2017-02-01	KoulMde	Koul's Minimum Distance Estimation in Linear Regression and Autoregression Model by Coordinate Descent Algorithm
2017-02-01	lcopula	Liouville Copulas
2017-02-01	pdR	Threshold Model and Unit Root Tests in Panel Data
2017-02-01	penalized	L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model
2017-02-01	PopGenReport	A Simple Framework to Analyse Population and Landscape Genetic Data
2017-02-01	ShinyTester	Functions to Minimize Bonehead Moves While Working with 'shiny'
2017-02-01	sonify	Data Sonification - Turning Data into Sound
2017-02-01	ssmsn	Scale-Shape Mixtures of Skew-Normal Distributions
2017-01-31	blendedLink	A New Link Function that Blends Two Specified Link Functions
2017-01-31	choroplethrMaps	Contains Maps Used by the 'choroplethr' Package
2017-01-31	cplexAPI	R Interface to C API of IBM ILOG CPLEX
2017-01-31	edstan	Stan Models for Item Response Theory
2017-01-31	iBST	Improper Bagging Survival Tree
2017-01-31	mfe	Meta-Feature Extractor
2017-01-31	subcopem2D	Bivariate Empirical Subcopula
2017-01-30	bunchr	Analyze Bunching in a Kink or Notch Setting
2017-01-30	flood	Statistical Methods for the (Regional) Analysis of Flood Frequency
2017-01-30	gesis	R Client for GESIS Data Catalogue (DBK)
2017-01-30	gunsales	Statistical Analysis of Monthly Background Checks of Gun Purchases
2017-01-30	inspectr	Perform Basic Checks of Dataframes
2017-01-30	mdatools	Multivariate Data Analysis for Chemometrics
2017-01-30	rcss	Convex Switching Systems
2017-01-29	nzpullover	Driving Offences in New Zealand Between 2009 and 2016
2017-01-29	observer	Observe and Check your Data
2017-01-29	poio	Input/Output Functionality for "PO" and "POT" Message Translation Files
2017-01-29	rflann	Basic R Interface to the 'FLANN' C++ Library
2017-01-29	TTCA	Transcript Time Course Analysis
2017-01-29	uroot	Unit Root Tests for Seasonal Time Series
2017-01-28	alphabetr	Algorithms for High-Throughput Sequencing of Antigen-Specific T Cells
2017-01-28	fastmatch	Fast match() function
2017-01-28	gbp	A Bin Packing Problem Solver
2017-01-28	hurricaneexposure	Explore and Map County-Level Hurricane Exposure in the United States
2017-01-28	iosmooth	Functions for Smoothing with Infinite Order Flat-Top Kernels
2017-01-28	phreeqc	R Interface to Geochemical Modeling Software
2017-01-28	tracer	Slick Call Stacks
2017-01-27	bayesQR	Bayesian Quantile Regression
2017-01-27	Boruta	Wrapper Algorithm for All Relevant Feature Selection
2017-01-27	cooccurNet	Co-Occurrence Network
2017-01-27	EffectTreat	Prediction of Therapeutic Success
2017-01-27	eply	Apply a Function Over Expressions
2017-01-27	iJRF	Integrative Joint Random Forest
2017-01-27	ionicons	'Ionicons' Icon Pack
2017-01-27	landsat8	Landsat 8 Imagery Rescaled to Reflectance, Radiance and/or Temperature
2017-01-27	LumReader	TL/OSL Reader Simulator
2017-01-27	mixpack	Tools to Work with Mixture Components
2017-01-27	nycflights13	Flights that Departed NYC in 2013
2017-01-27	sparsestep	SparseStep Regression
2017-01-26	BayesPieceHazSelect	Variable Selection in a Hierarchical Bayesian Model for a Hazard Function
2017-01-26	BiSEp	Toolkit to Identify Candidate Synthetic Lethality
2017-01-26	bsplus	Adds Functionality to the R Markdown + Shiny Bootstrap Framework
2017-01-26	eclust	Environment Based Clustering for Interpretable Predictive Models in High Dimensional Data
2017-01-26	MEclustnet	Fits the Mixture of Experts Latent Position Cluster Model to Network Data
2017-01-26	nparsurv	Nonparametric Tests for Main Effects, Simple Effects and Interaction Effect in a Factorial Design with Censored Data
2017-01-26	Rcereal	C++11 Header Files for 'cereal'
2017-01-26	RKEELdata	Datasets from KEEL for it Use in RKEEL
2017-01-26	RKEELjars	Java Executable .jar Files for 'RKEEL'
2017-01-26	RRF	Regularized Random Forest
2017-01-25	fdapace	Functional Data Analysis and Empirical Dynamics
2017-01-25	goeveg	Functions for Community Data and Ordinations
2017-01-25	permutations	Permutations of a Finite Set
2017-01-24	givitiR	The GiViTI Calibration Test and Belt
2017-01-24	mutSignatures	Decipher Mutational Signatures from Somatic Mutational Catalogs
2017-01-24	NORMA	Builds General Noise SVRs
2017-01-24	powerEQTL	Power and Sample Size Calculation for eQTL Analysis
2017-01-24	rKIN	(Kernel) Isotope Niche Estimation
2017-01-24	RSelenium	R Bindings for 'Selenium WebDriver'
2017-01-24	simpleSetup	Set Up R Source Code Files for Use on Multiple Machines
2017-01-23	chi2x3way	Partitioning Chi-Squared and Tau Index for Three-Way Contingency Tables
2017-01-23	errint	Builds Error Intervals
2017-01-23	mads	Multi-Analysis Distance Sampling
2017-01-23	MTurkR	R Client for the MTurk Requester API
2017-01-23	RNCEP	Obtain, Organize, and Visualize NCEP Weather Data
2017-01-23	skm	Selective k-Means
2017-01-23	TH.data	TH's Data Archive
2017-01-23	wdman	'Webdriver'/'Selenium' Binary Manager
2017-01-22	ALDqr	Quantile Regression Using Asymmetric Laplace Distribution
2017-01-22	ICV	Indirect Cross-Validation (ICV) for Kernel Density Estimation
2017-01-22	intrval	Relational Operators for Intervals
2017-01-22	kpcalg	Kernel PC Algorithm for Causal Structure Detection
2017-01-22	maxlike	Model Species Distributions by Estimating the Probability of Occurrence Using Presence-Only Data
2017-01-22	metap	Meta-Analysis of Significance Values
2017-01-22	mglR	Master Gene List
2017-01-22	odds.converter	Betting Odds Conversion
2017-01-22	readability	Calculate Readability Scores
2017-01-22	SOFIA	Making Sophisticated and Aesthetical Figures in R
2017-01-22	tea	Threshold Estimation Approaches
2017-01-22	teda	An Implementation of the Typicality and Eccentricity Data Analysis Framework
2017-01-21	chords	Estimation in Respondent Driven Samples
2017-01-21	rcure	Robust Cure Models for Survival Analysis
2017-01-20	ecoval	Procedures for Ecological Assessment of Surface Waters
2017-01-20	testforDEP	Dependence Tests for Two Variables
2017-01-19	bytescircle	Statistics About Bytes Contained in a File as a Circle Plot
2017-01-19	deTestSet	Test Set for Differential Equations
2017-01-19	rUnemploymentData	Data and Functions for USA State and County Unemployment Data
2017-01-19	UncertainInterval	Uncertain Area Methods for Cut-Point Determination in Tests
2017-01-18	caesar	Encrypts and Decrypts Strings
2017-01-18	cleanr	Helps You to Code Cleaner
2017-01-18	conditions	Standardized Conditions for R
2017-01-18	HH	Statistical Analysis and Data Display: Heiberger and Holland
2017-01-18	isdparser	Parse 'NOAA' Integrated Surface Data Files
2017-01-18	MADPop	MHC Allele-Based Differencing Between Populations
2017-01-18	rgho	Access WHO Global Health Observatory Data from R
2017-01-18	shotGroups	Analyze Shot Group Data
2017-01-17	bayesianETAS	Bayesian Estimation of the ETAS Model for Earthquake Occurrences
2017-01-17	cclust	Convex Clustering Methods and Clustering Indexes
2017-01-17	clusrank	Wilcoxon Rank Sum Test for Clustered Data
2017-01-17	highcharter	A Wrapper for the 'Highcharts' Library
2017-01-17	KODAMA	Knowledge Discovery by Accuracy Maximization
2017-01-17	mangoTraining	Mango Solutions Training Datasets
2017-01-17	microclass	Methods for Taxonomic Classification of Prokaryotes
2017-01-17	normalr	Normalisation of Multiple Variables in Large-Scale Datasets
2017-01-17	rCAT	Conservation Assessment Tools
2017-01-17	rorutadis	Robust Ordinal Regression UTADIS
2017-01-17	tabplot	Tableplot, a Visualization of Large Datasets
2017-01-16	cumstats	Cumulative Descriptive Statistics
2017-01-16	matconv	A Code Converter from the Matlab/Octave Language to R
2017-01-16	peakRAM	Monitor the Total and Peak RAM Used by an Expression or Function
2017-01-16	radir	Inverse-Regression Estimation of Radioactive Doses
2017-01-15	maxmatching	Maximum Matching for General Weighted Graph
2017-01-15	mhsmm	Inference for Hidden Markov and Semi-Markov Models
2017-01-15	PoSI	Valid Post-Selection Inference for Linear LS Regression
2017-01-14	binman	A Binary Download Manager
2017-01-14	dfphase1	Phase I Control Charts (with Emphasis on Distribution-Free Methods)
2017-01-14	erah	Automated Spectral Deconvolution, Alignment, and Metabolite Identification in GC/MS-Based Untargeted Metabolomics
2017-01-14	flifo	Don't Get Stuck with Stacks in R
2017-01-14	InfiniumPurify	Estimate and Account for Tumor Purity in Cancer Methylation Data Analysis
2017-01-14	isva	Independent Surrogate Variable Analysis
2017-01-14	marima	Multivariate ARIMA and ARIMA-X Analysis
2017-01-14	owmr	OpenWeatherMap API Wrapper
2017-01-14	PhyloMeasures	Fast and Exact Algorithms for Computing Phylogenetic Biodiversity Measures
2017-01-14	rwars	R Client for the Star Wars API
2017-01-13	cablecuttr	A CanIStream.It API Wrapper
2017-01-13	GeneClusterNet	Gene Expression Clustering and Gene Network
2017-01-13	GMCM	Fast Estimation of Gaussian Mixture Copula Models
2017-01-13	GORCure	Fit Generalized Odds Rate Mixture Cure Model with Interval Censored Data
2017-01-13	ICGOR	Fit Generalized Odds Rate Hazards Model with Interval Censored Data
2017-01-13	IsoSpecR	The IsoSpec Algorithm
2017-01-13	SADEG	Stability Analysis in Differentially Expressed Genes
2017-01-13	sparkwarc	Load WARC Files into Apache Spark
2017-01-13	strip	Lighten your R Model Outputs
2017-01-13	TRADER	Tree Ring Analysis of Disturbance Events in R
2017-01-12	boxr	Interface for the 'Box.com API'
2017-01-12	EBrank	Empirical Bayes Ranking
2017-01-12	equate	Observed-Score Linking and Equating
2017-01-12	pxR	PC-Axis with R
2017-01-12	RChronoModel	Post-Processing of the Markov Chain Simulated by ChronoModel or Oxcal
2017-01-12	rld	Analyze and Design Repeated Low-Dose Challenge Experiments
2017-01-12	stampr	Spatial Temporal Analysis of Moving Polygons
2017-01-12	sybilSBML	SBML Integration in Package 'Sybil'
2017-01-12	zTree	Functions to Import Data from 'z-Tree' into R
2017-01-11	esmisc	Misc Functions of Eduard Szöcs
2017-01-11	goric	Generalized Order-Restricted Information Criterion for Selecting Order-Restricted (Multivariate) Linear Models
2017-01-11	NetWeaver	Graphic Presentation of Complex Genomic and Network Data Analysis
2017-01-11	ptstem	Stemming Algorithms for the Portuguese Language
2017-01-11	QRank	A Novel Quantile Regression Approach for eQTL Discovery
2017-01-11	RND	Risk Neutral Density Extraction Package
2017-01-10	ENMeval	Automated Runs and Evaluations of Ecological Niche Models
2017-01-10	hergm	Hierarchical Exponential-Family Random Graph Models
2017-01-10	icesDatras	DATRAS Trawl Database Web Services
2017-01-10	leaps	Regression Subset Selection
2017-01-10	marmap	Import, Plot and Analyze Bathymetric and Topographic Data
2017-01-10	MEGENA	Multiscale Clustering of Geometrical Network
2017-01-10	numbers	Number-Theoretic Functions
2017-01-10	qfasar	Quantitative Fatty Acid Signature Analysis in R
2017-01-10	regclass	Tools for an Introductory Class in Regression and Modeling
2017-01-10	SAVE	Bayesian Emulation, Calibration and Validation of Computer Models
2017-01-10	TAQMNGR	Manage Tick-by-Tick Transaction Data
2017-01-10	USGSstates2k	Replaced by 'states2k' – United States of America Map with the NAD 1983 Albers Projection
2017-01-10	VGAMdata	Data Supporting the 'VGAM' Package
2017-01-09	BoolFilter	Optimal Estimation of Partially Observed Boolean Dynamical Systems
2017-01-09	dismo	Species Distribution Modeling
2017-01-09	esaddle	Extended Empirical Saddlepoint Density Approximation
2017-01-09	JADE	Blind Source Separation Methods Based on Joint Diagonalization and Some BSS Performance Criteria
2017-01-09	npmv	Nonparametric Comparison of Multivariate Samples
2017-01-09	rangeMapper	A Platform for the Study of Macro-Ecology of Life History Traits
2017-01-09	rjsonapi	Consumer for APIs that Follow the JSON API Specification
2017-01-09	speedglm	Fitting Linear and Generalized Linear Models to Large Data Sets
2017-01-09	ssizeRNA	Sample Size Calculation for RNA-Seq Experimental Design
2017-01-09	StatMatch	Statistical Matching
2017-01-09	stormwindmodel	Model Tropical Cyclone Wind Speeds
2017-01-09	tensorBF	Bayesian Tensor Factorization
2017-01-08	epidata	Tools to Retrieve Economic Policy Institute Data Library Extracts
2017-01-08	fancycut	A Fancy Version of 'base::cut'
2017-01-08	lowmemtkmeans	Low Memory Use Trimmed K-Means
2017-01-08	monomvn	Estimation for Multivariate Normal and Student-t Data with Monotone Missingness
2017-01-08	rly	'Lex' and 'Yacc'
2017-01-08	toaster	Big Data in-Database Analytics that Scales with Teradata Aster Distributed Platform
2017-01-07	AER	Applied Econometrics with R
2017-01-07	caseMatch	Identify Similar Cases for Qualitative Case Studies
2017-01-07	depth	Nonparametric Depth Functions for Multivariate Analysis
2017-01-07	MAMSE	Calculation of Minimum Averaged Mean Squared Error (MAMSE) Weights
2017-01-07	openVA	Automated Method for Verbal Autopsy
2017-01-07	panelaggregation	Aggregate Longitudinal Survey Data
2017-01-07	sysid	System Identification in R
2017-01-07	waffle	Create Waffle Chart Visualizations in R
2017-01-06	ahp	Analytic Hierarchy Process
2017-01-06	biogram	N-Gram Analysis of Biological Sequences
2017-01-06	BivRegBLS	Tolerance Intervals and Errors-in-Variables Regressions in Method Comparison Studies
2017-01-06	cairoDevice	Embeddable Cairo Graphics Device Driver
2017-01-06	Datasmith	Tools to Complete Euclidean Distance Matrices
2017-01-06	DFIT	Differential Functioning of Items and Tests
2017-01-06	eHOF	Extended HOF (Huisman-Olff-Fresco) Models
2017-01-06	epifit	Flexible Modelling Functions for Epidemiological Data Analysis
2017-01-06	fabCI	FAB Confidence Intervals
2017-01-06	ltxsparklines	Lightweight Sparklines for a LaTeX Document
2017-01-06	pamctdp	Principal Axes Methods for Contingency Tables with Partition Structures on Rows and Columns
2017-01-06	Plasmidprofiler	Visualization of Plasmid Profile Results
2017-01-06	rodeo	A Code Generator for ODE-Based Models
2017-01-06	semver	'Semantic Versioning V2.0.0' Parser
2017-01-06	stR	STR Decomposition
2017-01-06	stremr	Streamlined Estimation of Survival for Static, Dynamic and Stochastic Treatment and Monitoring Regimes
2017-01-05	crisp	Fits a Model that Partitions the Covariate Space into Blocks in a Data- Adaptive Way
2017-01-05	etasFLP	Mixed FLP and ML Estimation of ETAS Space-Time Point Processes
2017-01-05	FixSeqMTP	Fixed Sequence Multiple Testing Procedures
2017-01-05	gsl	Wrapper for the Gnu Scientific Library
2017-01-05	hail	Read HYDRA Rainfall Data
2017-01-05	lfda	Local Fisher Discriminant Analysis
2017-01-05	lmfor	Functions for Forest Biometrics
2017-01-05	MRCE	Multivariate Regression with Covariance Estimation
2017-01-05	ParamHelpers	Helpers for Parameters in Black-Box Optimization, Tuning and Machine Learning
2017-01-05	partDSA	Partitioning Using Deletion, Substitution, and Addition Moves
2017-01-05	requireR	R Source Code Modularizer
2017-01-05	RWinEdt	R Interface to 'WinEdt'
2017-01-05	TBSSurvival	Survival Analysis using a Transform-Both-Sides Model
2017-01-04	BayesPiecewiseICAR	Hierarchical Bayesian Model for a Hazard Function
2017-01-04	dSVA	Direct Surrogate Variable Analysis
2017-01-04	dygraphs	Interface to 'Dygraphs' Interactive Time Series Charting Library
2017-01-04	HeritSeq	Heritability of Gene Expression for Next-Generation Sequencing
2017-01-04	minimalRSD	Minimally Changed CCD and BBD
2017-01-04	Partiallyoverlapping	Partially Overlapping Samples t-Tests
2017-01-04	pwt8	Penn World Table (Version 8.x)
2017-01-04	pwt9	Penn World Table (Version 9.x)
2017-01-04	Redmonder	Microsoft(r)-Inspired Color Palettes
2017-01-04	SimPhe	Tools to Simulate Phenotype(s) with Epistatic Interaction
2017-01-04	treemap	Treemap Visualization
2017-01-04	tsdecomp	Decomposition of Time Series Data
2017-01-04	TSeriesMMA	Multiscale Multifractal Analysis of Time Series Data
2017-01-03	colr	Functions to Select and Rename Data
2017-01-03	dpcR	Digital PCR Analysis
2017-01-03	FTRLProximal	FTRL Proximal Implementation for Elastic Net Regression
2017-01-03	natserv	'NatureServe' Interface
2017-01-03	NCmisc	Miscellaneous Functions for Creating Adaptive Functions and Scripts
2017-01-03	openadds	Client to Access 'Openaddresses' Data
2017-01-03	QCAtools	Helper Functions for QCA in R
2017-01-03	reader	Suite of Functions to Flexibly Read Data from Files
2017-01-03	rebus.unicode	Unicode Extensions for the 'rebus' Package
2017-01-03	rneos	XML-RPC Interface to NEOS
2017-01-02	coxphw	Weighted Estimation in Cox Regression
2017-01-02	makedummies	Create Dummy Variables from Categorical Data
2017-01-01	abundant	High-Dimensional Principal Fitted Components and Abundant Regression
2017-01-01	awsjavasdk	Boilerplate R Access to the Amazon Web Services ('AWS') Java SDK
2017-01-01	googleVis	R Interface to Google Charts
2016-12-31	assertive	Readable Check Functions to Ensure Code Integrity
2016-12-31	censys	Tools to Query the 'Censys' API
2016-12-31	factorstochvol	Bayesian Estimation of (Sparse) Latent Factor Stochastic Volatility Models
2016-12-31	futureheatwaves	Find, Characterize, and Explore Extreme Events in Climate Projections
2016-12-31	grpregOverlap	Penalized Regression Models with Overlapping Grouped Covariates
2016-12-31	hds	Hazard Discrimination Summary
2016-12-31	likert	Analysis and Visualization Likert Items
2016-12-31	sdprisk	Measures of Risk for the Compound Poisson Risk Process with Diffusion
2016-12-30	assertive.base	A Lightweight Core of the 'assertive' Package
2016-12-30	assertive.properties	Assertions to Check Properties of Variables
2016-12-30	assertive.reflection	Assertions for Checking the State of R
2016-12-30	assertive.sets	Assertions to Check Properties of Sets
2016-12-30	assertive.types	Assertions to Check Types of Variables
2016-12-30	bootruin	A Bootstrap Test for the Probability of Ruin in the Classical Risk Process
2016-12-30	bossMaps	Convert Binary Species Range Maps into Continuous Surfaces Based on Distance to Range Edge
2016-12-30	errorlocate	Locate Errors with Validation Rules
2016-12-30	finiteruinprob	Computation of the Probability of Ruin Within a Finite Time Horizon
2016-12-30	GCPM	Generalized Credit Portfolio Model
2016-12-30	ggplot2	Create Elegant Data Visualisations Using the Grammar of Graphics
2016-12-30	GSE	Robust Estimation in the Presence of Cellwise and Casewise Contamination and Missing Data
2016-12-30	gsheet	Download Google Sheets Using Just the URL
2016-12-30	HDtest	High Dimensional Hypothesis Testing for Mean Vectors, Covariance Matrices, and White Noise of Vector Time Series
2016-12-30	list	Statistical Methods for the Item Count Technique and List Experiment
2016-12-30	RcppMLPACK	'Rcpp' Integration for the 'MLPACK' Library
2016-12-30	uniah	Unimodal Additive Hazards Model
2016-12-29	AcceptanceSampling	Creation and Evaluation of Acceptance Sampling Plans
2016-12-29	fortunes	R Fortunes
2016-12-29	htmltab	Assemble Data Frames from HTML Tables
2016-12-28	attrCUSUM	Tools for Attribute VSI CUSUM Control Chart
2016-12-28	confreq	Configural Frequencies Analysis Using Log-Linear Modeling
2016-12-28	nplr	N-Parameter Logistic Regression
2016-12-27	acrt	Autocorrelation Robust Testing
2016-12-27	ashr	Methods for Adaptive Shrinkage, using Empirical Bayes
2016-12-27	bayesloglin	Bayesian Analysis of Contingency Table Data
2016-12-27	Bchron	Radiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate Estimation, and Non-Parametric Phase Modelling
2016-12-27	Bclim	Bayesian Palaeoclimate Reconstruction from Pollen Data
2016-12-27	cvequality	Tests for the Equality of Coefficients of Variation from Multiple Groups
2016-12-27	DStree	Recursive Partitioning for Discrete-Time Survival Trees
2016-12-27	GMD	Generalized Minimum Distance of distributions
2016-12-27	IRTpp	Estimating IRT Parameters using the IRT Methodology
2016-12-27	KTensorGraphs	Co-Tucker3 Analysis of Two Sequences of Matrices
2016-12-27	mRm	An R Package for Conditional Maximum Likelihood Estimation in Mixed Rasch Models
2016-12-27	restrictedMVN	Multivariate Normal Restricted by Affine Constraints
2016-12-27	rFTRLProximal	FTRL-Proximal Algorithm
2016-12-27	rpubchem	An Interface to the PubChem Collection
2016-12-27	SCBmeanfd	Simultaneous Confidence Bands for the Mean of Functional Data
2016-12-27	spark.sas7bdat	Read in 'SAS' Data ('.sas7bdat' Files) into 'Apache Spark'
2016-12-27	UStatBookABSC	A Companion Package to the Book "U-Statistics, M-Estimation and Resampling"
2016-12-26	DISTRIB	Four Essential Functions for Statistical Distributions Analysis: A New Functional Approach
2016-12-26	factorcpt	Simultaneous Change-Point and Factor Analysis
2016-12-26	GLDEX	Fitting Single and Mixture of Generalised Lambda Distributions (RS and FMKL) using Various Methods
2016-12-26	tilting	Variable Selection via Tilted Correlation Screening Algorithm
2016-12-26	utf8latex	Importing, Exporting and Converting Between Datasets and LaTeX
2016-12-24	findviews	A View Generator for Multidimensional Data
2016-12-24	ggguitar	Utilities for Creating Guitar Tablature
2016-12-24	rnrfa	UK National River Flow Archive Data from R
2016-12-24	samplesize	Sample Size Calculation for Various t-Tests and Wilcoxon-Test
2016-12-23	gemtc	Network Meta-Analysis Using Bayesian Methods
2016-12-23	hitandrun	"Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes
2016-12-23	quint	Qualitative Interaction Trees
2016-12-23	Rarity	Calculation of Rarity Indices for Species and Assemblages of Species
2016-12-23	ROI.models.netlib	'ROI' Optimization Problems Based on 'NETLIB-LP'
2016-12-23	smaa	Stochastic Multi-Criteria Acceptability Analysis
2016-12-23	stepPenal	Stepwise Forward Variable Selection in Penalized Regression
2016-12-23	ztype	Run a Ztype Game Loaded with R Functions
2016-12-22	concreg	Concordance Regression
2016-12-22	coxphf	Cox Regression with Firth's Penalized Likelihood
2016-12-22	heritability	Marker-Based Estimation of Heritability Using Individual Plant or Plot Data
2016-12-22	lavaan.survey	Complex Survey Structural Equation Modeling (SEM)
2016-12-22	readJDX	Import Data in the JCAMP-DX Format
2016-12-22	rowr	Row-Based Functions for R Objects
2016-12-22	sampling	Survey Sampling
2016-12-21	condSURV	Estimation of the Conditional Survival Function for Ordered Multivariate Failure Time Data
2016-12-21	crosstalk	Inter-Widget Interactivity for HTML Widgets
2016-12-21	GPrank	Gaussian Process Ranking of Multiple Time Series
2016-12-21	growcurves	Bayesian Semi and Nonparametric Growth Curve Models that Additionally Include Multiple Membership Random Effects
2016-12-21	ms.sev	Package for Calculation of ARMSS, Local MSSS and Global MSSS
2016-12-21	pgee.mixed	Penalized Generalized Estimating Equations for Bivariate Mixed Outcomes
2016-12-21	rocNIT	Non-Inferiority Test for Paired ROC Curves
2016-12-21	SpaTimeClus	Model-Based Clustering of Spatio-Temporal Data
2016-12-20	akima	Interpolation of Irregularly and Regularly Spaced Data
2016-12-20	aws.ses	AWS SES Client Package
2016-12-20	HDclassif	High Dimensional Supervised Classification and Clustering
2016-12-20	OData	R Helper for OData Web Services
2016-12-20	PredictTestbench	Test Bench for Comparison of Data Prediction Models
2016-12-20	radarchart	Radar Chart from 'Chart.js'
2016-12-20	scdhlm	Estimating Hierarchical Linear Models for Single-Case Designs
2016-12-20	SPPcomb	Combining Different Spatial Datasets in Cancer Risk Estimation
2016-12-20	stmgui	Shiny Application for Creating STM Models
2016-12-19	bcRep	Advanced Analysis of B Cell Receptor Repertoire Data
2016-12-19	DEoptim	Global Optimization by Differential Evolution
2016-12-19	logistf	Firth's Bias-Reduced Logistic Regression
2016-12-19	pipeliner	Machine Learning Pipelines for R
2016-12-19	qwraps2	Quick Wraps 2
2016-12-19	selectr	Translate CSS Selectors to XPath Expressions
2016-12-18	DirectStandardisation	Adjusted Means and Proportions by Direct Standardisation
2016-12-18	longurl	Expand Short URLs
2016-12-18	magicfor	Magic Functions to Obtain Results from for Loops
2016-12-18	pls	Partial Least Squares and Principal Component Regression
2016-12-18	rPref	Database Preferences and Skyline Computation
2016-12-18	tigerstats	R Functions for Elementary Statistics
2016-12-17	ACTCD	Asymptotic Classification Theory for Cognitive Diagnosis
2016-12-17	MTDrh	Mass Transportation Distance Rank Histogram
2016-12-17	MWRidge	Two Stage Moving-Window Ridge Method for Prediction and Estimation
2016-12-17	PepSAVIms	PepSAVI-MS Data Analysis
2016-12-17	PGM2	Nested Resolvable Designs and their Associated Uniform Designs
2016-12-17	ramify	Additional Matrix Functionality
2016-12-17	textutils	Utilities for Handling Strings and Text
2016-12-17	touch	Tools of Utilization and Cost in Healthcare
2016-12-16	acc	Exploring Accelerometer Data
2016-12-16	binseqtest	Exact Binary Sequential Designs and Analysis
2016-12-16	bivrp	Bivariate Residual Plots with Simulation Polygons
2016-12-16	cowsay	Messages, Warnings, Strings with Ascii Animals
2016-12-16	Ecdat	Data Sets for Econometrics
2016-12-16	FinancialMath	Financial Mathematics for Actuaries
2016-12-16	multiDimBio	Multivariate Analysis and Visualization for Biological Data
2016-12-16	pdfsearch	Search Tools for PDF Files
2016-12-16	polyfreqs	Bayesian Population Genomics in Autopolyploids
2016-12-16	rncl	An Interface to the Nexus Class Library
2016-12-16	sjdbc	JDBC Driver Interface
2016-12-16	tripack	Triangulation of Irregularly Spaced Data
2016-12-15	coprimary	Sample Size Calculation for Two Primary Time-to-Event Endpoints in Clinical Trials
2016-12-15	KoNLP	Korean NLP Package
2016-12-15	MvBinary	Modelling Multivariate Binary Data with Blocks of Specific One-Factor Distribution
2016-12-15	NScluster	Simulation and Estimation of the Neyman-Scott Type Spatial Cluster Models
2016-12-15	redland	RDF Library Bindings in R
2016-12-15	skellam	Densities and Sampling for the Skellam Distribution
2016-12-15	tibbrConnector	R Interface to TIBCO 'tibbr'
2016-12-15	tmvnsim	Truncated Multivariate Normal Simulation
2016-12-14	activpalProcessing	Process activPAL Events Files
2016-12-14	BTYDplus	Probabilistic Models for Assessing and Predicting your Customer Base
2016-12-14	ca	Simple, Multiple and Joint Correspondence Analysis
2016-12-14	ClustVarLV	Clustering of Variables Around Latent Variables
2016-12-14	colorspace	Color Space Manipulation
2016-12-14	datasets.load	Interface for Loading Datasets
2016-12-14	FLSSS	Multi-Threaded Multidimensional Fixed Size Subset Sum Solver and Extension to General-Purpose Knapsack Problem
2016-12-14	progress	Terminal Progress Bars
2016-12-14	VizOR	Graphical Visualization Tools for Complex Observational Data with Focus on Health Sciences
2016-12-14	wux	Wegener Center Climate Uncertainty Explorer
2016-12-13	admixturegraph	Admixture Graph Manipulation and Fitting
2016-12-13	bnstruct	Bayesian Network Structure Learning from Data with Missing Values
2016-12-13	bpp	Computations Around Bayesian Predictive Power
2016-12-13	DIFtree	Item Focused Trees for the Identification of Items in Differential Item Functioning
2016-12-13	fanc	Penalized Likelihood Factor Analysis via Nonconvex Penalty
2016-12-13	GrapheR	A Multi-Platform GUI for Drawing Customizable Graphs in R
2016-12-13	MODISSnow	Provides a Function to Download MODIS Snow Cover
2016-12-13	nhanesA	NHANES Data Retrieval
2016-12-13	patchSynctex	Communication Between Editor and Viewer for Literate Programs
2016-12-13	poptrend	Estimate Smooth and Linear Trends from Population Count Survey Data
2016-12-13	prclust	Penalized Regression-Based Clustering Method
2016-12-13	scatterD3	D3 JavaScript Scatterplot from R
2016-12