Allows the estimation of hierarchical F-statistics from haploid or diploid genetic data with any numbers of levels in the hierarchy, following the algorithm of Yang (Evolution, 1998, 52(4):950-956; <doi:10.2307/2411227>. Functions are also given to test via randomisations the significance of each F and variance components, using the likelihood-ratio statistics G.
| Version: | 0.04-22 |
| Depends: | R (≥ 2.10) |
| Imports: | gtools, ade4, adegenet |
| Suggests: | ape, pegas, knitr |
| Published: | 2015-12-04 |
| Author: | Jerome Goudet [aut, cre], Thibaut Jombart [aut] |
| Maintainer: | Jerome Goudet <jerome.goudet at unil.ch> |
| BugReports: | https://github.com/jgx65/hierfstat/issues |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | http://www.r-project.org, http://github.com/jgx65/hierfstat |
| NeedsCompilation: | no |
| In views: | Genetics |
| CRAN checks: | hierfstat results |
| Reference manual: | hierfstat.pdf |
| Vignettes: |
The Hierfstat Package |
| Package source: | hierfstat_0.04-22.tar.gz |
| Windows binaries: | r-devel: hierfstat_0.04-22.zip, r-release: hierfstat_0.04-22.zip, r-oldrel: hierfstat_0.04-22.zip |
| OS X El Capitan binaries: | r-release: hierfstat_0.04-22.tgz |
| OS X Mavericks binaries: | r-oldrel: hierfstat_0.04-22.tgz |
| Old sources: | hierfstat archive |
| Reverse imports: | RADami, skeleSim |
| Reverse suggests: | adegenet |
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