Preprocessing of high-throughput data (normalization and scalings); Principal Component Analysis with help tool for choosing best-separating principal components and automatic testing for outliers; automatic univariate analysis for parametric and non-parametric data, with generation of specific reports (volcano and box plots); partial least square discriminant analysis (PLS-DA); orthogonal partial least square discriminant analysis (OPLS-DA); Statistical Total Correlation Spectroscopy (STOCSY); Ratio Analysis Nuclear Magnetic Resonance (NMR) Spectroscopy (RANSY).
Version: | 1.4 |
Depends: | car, pdist, pls, gplots, mvtnorm, robustbase, gtools, bitops, caTools, pcaPP, rrcov |
Published: | 2012-12-03 |
Author: | Edoardo Gaude, Francesca Chignola, Dimitrios Spiliotopoulos, Silvia Mari, Andrea Spitaleri and Michela Ghitti |
Maintainer: | Edoardo gaude <egaude541 at gmail.com> |
License: | GPL-2 |
NeedsCompilation: | no |
CRAN checks: | muma results |
Reference manual: | muma.pdf |
Package source: | muma_1.4.tar.gz |
Windows binaries: | r-devel: muma_1.4.zip, r-release: muma_1.4.zip, r-oldrel: muma_1.4.zip |
OS X El Capitan binaries: | r-release: muma_1.4.tgz |
OS X Mavericks binaries: | r-oldrel: muma_1.4.tgz |
Old sources: | muma archive |
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