Creation of linkage maps in polyploid species from marker dosage scores of an F1 cross from two heterozygous parents. Currently works for autotriploid, autotetraploid and autohexaploid species, as well as segmental allotetraploids. Methods are described in a preprint manuscript of Bourke et al. (2017) <doi:10.1101/228817>.
Version: | 1.0.13 |
Depends: | R (≥ 2.10) |
Imports: | igraph, doParallel, foreach, knitr, Matrix, combinat, MDSMap |
Suggests: | rmarkdown, Hmisc, LPmerge, reshape2, RColorBrewer |
Published: | 2018-02-13 |
Author: | Peter Bourke [aut, cre], Geert van Geest [aut] |
Maintainer: | Peter Bourke <pbourkey at gmail.com> |
License: | GPL-2 | GPL-3 [expanded from: GPL] |
NeedsCompilation: | no |
CRAN checks: | polymapR results |
Reference manual: | polymapR.pdf |
Vignettes: |
Basic functionality |
Package source: | polymapR_1.0.13.tar.gz |
Windows binaries: | r-devel: polymapR_1.0.13.zip, r-release: polymapR_1.0.13.zip, r-oldrel: polymapR_1.0.13.zip |
OS X El Capitan binaries: | r-release: not available |
OS X Mavericks binaries: | r-oldrel: polymapR_1.0.12.tgz |
Old sources: | polymapR archive |
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